Wall clock time and date at job start Tue Mar 9 2021 12:56:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47172 * 2 1 4 4 C 1.50701 * 109.47262 * 120.00303 * 2 1 3 5 5 C 1.38599 * 120.72429 * 64.99668 * 4 2 1 6 6 N 1.32267 * 119.19962 * 179.97438 * 5 4 2 7 7 C 1.32493 * 120.74493 * 0.02562 * 6 5 4 8 8 N 1.38400 * 119.22216 * 179.97438 * 7 6 5 9 9 C 1.46501 * 120.00379 * 180.02562 * 8 7 6 10 10 H 1.09007 * 112.84845 * 23.79925 * 9 8 7 11 11 C 1.53776 * 113.62109 * 155.00113 * 9 8 7 12 12 C 1.53782 * 87.08276 * 89.11124 * 11 9 8 13 13 H 1.08993 * 113.61415 * 270.80399 * 12 11 9 14 14 C 1.50705 * 113.60976 * 139.98062 * 12 11 9 15 15 C 1.38218 * 119.96281 * 121.52974 * 14 12 11 16 16 C 1.38243 * 120.04677 * 179.72024 * 15 14 12 17 17 C 1.38404 * 119.98535 * 0.26272 * 16 15 14 18 18 F 1.35094 * 120.02973 * 180.02562 * 17 16 15 19 19 C 1.38595 * 119.93829 * 359.97438 * 17 16 15 20 20 Cl 1.73602 * 120.02079 * 179.97438 * 19 17 16 21 21 C 1.38251 * 119.97240 * 301.76608 * 14 12 11 22 22 C 1.53780 * 87.16855 * 25.39625 * 12 11 9 23 23 N 1.32496 * 121.56057 * 0.27374 * 7 6 5 24 24 C 1.32281 * 120.74173 * 359.44011 * 23 7 6 25 25 H 0.96699 * 114.00441 * 299.99554 * 1 2 3 26 26 H 1.09001 * 109.47140 * 240.00227 * 2 1 3 27 27 H 1.48499 * 109.99901 * 300.00296 * 3 2 1 28 28 H 1.48504 * 109.99569 * 61.31623 * 3 2 1 29 29 H 1.08004 * 120.39726 * 359.96222 * 5 4 2 30 30 H 0.97001 * 120.00339 * 359.97438 * 8 7 6 31 31 H 1.09002 * 113.60843 * 334.56293 * 11 9 8 32 32 H 1.08994 * 113.61911 * 203.66741 * 11 9 8 33 33 H 1.08002 * 119.98146 * 0.02562 * 15 14 12 34 34 H 1.07996 * 120.00730 * 180.23498 * 16 15 14 35 35 H 1.08004 * 119.99352 * 0.02562 * 21 14 12 36 36 H 1.08995 * 113.61774 * 89.15677 * 22 12 11 37 37 H 1.09004 * 113.61175 * 220.06155 * 22 12 11 38 38 H 1.07994 * 120.40652 * 180.24901 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6926 -2.0633 1.4140 6 7 2.1478 -2.6567 2.5049 7 6 2.8242 -1.9726 3.4160 8 7 3.2856 -2.6251 4.5460 9 6 4.0349 -1.8852 5.5645 10 1 3.8226 -0.8160 5.5528 11 6 3.9557 -2.5137 6.9657 12 6 5.1935 -3.3403 6.5790 13 1 4.9526 -4.2892 6.1000 14 6 6.1949 -3.4859 7.6957 15 6 6.5511 -4.7440 8.1438 16 6 7.4739 -4.8798 9.1642 17 6 8.0376 -3.7551 9.7412 18 9 8.9399 -3.8867 10.7380 19 6 7.6763 -2.4937 9.2948 20 17 8.3814 -1.0816 10.0175 21 6 6.7528 -2.3610 8.2742 22 6 5.5378 -2.2184 5.5853 23 7 3.0644 -0.6774 3.2736 24 6 2.6419 -0.0250 2.2033 25 1 -0.3934 0.4416 0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2084 28 1 1.5878 2.4585 1.2243 29 1 1.1413 -2.6262 0.6752 30 1 3.1123 -3.5721 4.6640 31 1 3.0608 -3.1156 7.1241 32 1 4.1387 -1.8050 7.7732 33 1 6.1120 -5.6218 7.6932 34 1 7.7546 -5.8632 9.5112 35 1 6.4704 -1.3784 7.9261 36 1 6.1543 -1.4287 6.0147 37 1 5.9185 -2.5822 4.6308 38 1 2.8441 1.0299 2.0909 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10156536_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:12 Heat of formation + Delta-G solvation = 41.677081 kcal Electronic energy + Delta-G solvation = -24979.838653 eV Core-core repulsion = 20958.889276 eV Total energy + Delta-G solvation = -4020.949377 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.078 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -50.04771 -42.15157 -41.21145 -39.32430 -38.09162 -37.58446 -35.48409 -34.71224 -32.46115 -31.99978 -31.12267 -26.94119 -26.67562 -26.09860 -25.49864 -24.24622 -23.28478 -22.68343 -20.36473 -19.60136 -18.92943 -18.54384 -18.06758 -17.73214 -17.16582 -16.85781 -16.56725 -16.35142 -16.14289 -15.94968 -15.66572 -15.54728 -15.08527 -14.77751 -14.58106 -14.44357 -14.17947 -13.99590 -13.95568 -13.62859 -13.44568 -13.15034 -12.62987 -12.58452 -12.26575 -12.15313 -11.90365 -11.89195 -11.82479 -11.70383 -11.26185 -11.11529 -10.66670 -10.04658 -10.03384 -9.59572 -9.09218 -4.89612 -0.12838 0.01484 0.05994 0.15139 0.93641 1.33175 1.61010 1.80199 1.99433 2.32726 2.78913 3.03279 3.16002 3.43701 3.44773 3.57853 3.65340 3.66974 3.70983 3.74741 3.80623 3.95471 4.04705 4.09940 4.23431 4.27935 4.46912 4.65377 4.67252 4.75916 4.78941 4.84969 4.85291 4.88602 4.99831 5.04858 5.07526 5.16505 5.35018 5.47580 5.65158 5.81739 6.07089 6.41778 6.50535 7.28668 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.056 4.056 3 Si 0.758 3.242 4 C -0.284 4.284 5 C 0.213 3.787 6 N -0.589 5.589 7 C 0.555 3.445 8 N -0.673 5.673 9 C 0.135 3.865 10 H 0.101 0.899 11 C -0.130 4.130 12 C -0.065 4.065 13 H 0.117 0.883 14 C -0.064 4.064 15 C -0.078 4.078 16 C -0.140 4.140 17 C 0.077 3.923 18 F -0.143 7.143 19 C -0.085 4.085 20 Cl -0.062 7.062 21 C -0.081 4.081 22 C -0.141 4.141 23 N -0.576 5.576 24 C 0.192 3.808 25 H 0.385 0.615 26 H 0.131 0.869 27 H -0.301 1.301 28 H -0.278 1.278 29 H 0.183 0.817 30 H 0.419 0.581 31 H 0.084 0.916 32 H 0.105 0.895 33 H 0.166 0.834 34 H 0.160 0.840 35 H 0.157 0.843 36 H 0.101 0.899 37 H 0.068 0.932 38 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.658 -1.092 -2.269 2.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.166 4.166 3 Si 0.663 3.337 4 C -0.292 4.292 5 C 0.046 3.954 6 N -0.311 5.311 7 C 0.198 3.802 8 N -0.309 5.309 9 C 0.029 3.971 10 H 0.119 0.881 11 C -0.168 4.168 12 C -0.083 4.083 13 H 0.135 0.865 14 C -0.065 4.065 15 C -0.095 4.095 16 C -0.159 4.159 17 C 0.057 3.943 18 F -0.121 7.121 19 C -0.113 4.113 20 Cl -0.033 7.033 21 C -0.100 4.100 22 C -0.180 4.180 23 N -0.298 5.298 24 C 0.025 3.975 25 H 0.234 0.766 26 H 0.149 0.851 27 H -0.229 1.229 28 H -0.205 1.205 29 H 0.200 0.800 30 H 0.258 0.742 31 H 0.103 0.897 32 H 0.123 0.877 33 H 0.184 0.816 34 H 0.178 0.822 35 H 0.174 0.826 36 H 0.119 0.881 37 H 0.086 0.914 38 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges -0.235 -0.841 -1.703 1.914 hybrid contribution -1.024 0.067 0.256 1.058 sum -1.259 -0.774 -1.447 2.069 Atomic orbital electron populations 1.86590 1.18541 1.80236 1.50132 1.24840 0.83175 1.11120 0.97512 0.94264 0.90229 0.72315 0.76855 1.21674 1.08533 0.97350 1.01635 1.23149 0.89121 0.91648 0.91481 1.67993 1.17361 1.40645 1.05143 1.19613 0.87271 0.85841 0.87452 1.43867 1.57714 1.12053 1.17234 1.21887 0.91258 0.97111 0.86891 0.88092 1.23450 0.97946 0.99429 0.95935 1.21639 0.93513 0.99884 0.93245 0.86525 1.19888 0.97373 0.92088 0.97113 1.21400 0.95037 0.98558 0.94556 1.21433 0.98423 0.97950 0.98067 1.17826 0.92777 0.93682 0.89980 1.91512 1.65185 1.96665 1.58788 1.21181 1.02260 0.86976 1.00867 1.98401 1.83222 1.39007 1.82688 1.21004 0.94267 1.01274 0.93422 1.23625 0.96504 0.98456 0.99417 1.67963 1.27695 1.08333 1.25821 1.23208 0.87756 1.00291 0.86254 0.76566 0.85083 1.22906 1.20491 0.80039 0.74202 0.89713 0.87655 0.81639 0.82228 0.82571 0.88102 0.91364 0.79860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.38 12.85 -148.98 -1.91 -1.53 16 2 C -0.06 0.23 2.83 71.24 0.20 0.43 16 3 Si 0.76 -3.67 29.95 68.60 2.05 -1.62 16 4 C -0.28 0.55 5.36 -19.69 -0.11 0.44 16 5 C 0.21 0.10 10.99 84.71 0.93 1.03 16 6 N -0.59 -2.25 10.46 -198.00 -2.07 -4.32 16 7 C 0.55 1.66 8.43 261.49 2.20 3.86 16 8 N -0.67 1.35 5.41 -327.65 -1.77 -0.42 16 9 C 0.13 -0.64 4.34 45.58 0.20 -0.44 16 10 H 0.10 -0.22 7.36 -2.38 -0.02 -0.24 16 11 C -0.13 1.02 7.29 31.12 0.23 1.25 16 12 C -0.06 0.52 3.85 -11.01 -0.04 0.48 16 13 H 0.12 -1.19 8.08 -2.39 -0.02 -1.21 16 14 C -0.06 0.33 5.29 -19.86 -0.11 0.22 16 15 C -0.08 0.42 9.70 22.27 0.22 0.64 16 16 C -0.14 0.26 10.03 22.31 0.22 0.48 16 17 C 0.08 0.27 7.28 22.39 0.16 0.43 16 18 F -0.14 -1.07 16.84 44.97 0.76 -0.32 16 19 C -0.09 -0.22 6.33 22.36 0.14 -0.07 16 20 Cl -0.06 -0.28 28.62 -2.72 -0.08 -0.36 16 21 C -0.08 0.19 8.31 22.28 0.19 0.38 16 22 C -0.14 0.85 7.27 31.18 0.23 1.08 16 23 N -0.58 -1.53 9.13 -197.99 -1.81 -3.34 16 24 C 0.19 -0.20 9.92 84.71 0.84 0.64 16 25 H 0.39 -2.19 8.70 -74.06 -0.64 -2.83 16 26 H 0.13 -0.82 7.96 -2.39 -0.02 -0.84 16 27 H -0.30 -1.02 7.11 99.48 0.71 -0.31 16 28 H -0.28 0.38 7.02 99.48 0.70 1.08 16 29 H 0.18 -0.57 8.06 -2.91 -0.02 -0.59 16 30 H 0.42 -1.87 8.82 -92.71 -0.82 -2.69 16 31 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 32 H 0.11 -0.87 7.62 -2.39 -0.02 -0.89 16 33 H 0.17 -1.80 8.05 -2.91 -0.02 -1.82 16 34 H 0.16 -0.85 8.06 -2.91 -0.02 -0.88 16 35 H 0.16 -0.86 6.73 -2.91 -0.02 -0.88 16 36 H 0.10 -0.68 6.41 -2.39 -0.02 -0.70 16 37 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 38 H 0.18 -1.08 5.01 -2.91 -0.01 -1.09 16 Total: 0.00 -16.31 341.73 0.39 -15.93 By element: Atomic # 1 Polarization: -14.57 SS G_CDS: -0.29 Total: -14.86 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: 5.50 Total: 10.84 kcal Atomic # 7 Polarization: -2.42 SS G_CDS: -5.65 Total: -8.07 kcal Atomic # 8 Polarization: 0.38 SS G_CDS: -1.91 Total: -1.53 kcal Atomic # 9 Polarization: -1.07 SS G_CDS: 0.76 Total: -0.32 kcal Atomic # 14 Polarization: -3.67 SS G_CDS: 2.05 Total: -1.62 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -0.08 Total: -0.36 kcal Total: -16.31 0.39 -15.93 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10156536_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.602 kcal (2) G-P(sol) polarization free energy of solvation -16.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.677 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds