Wall clock time and date at job start Tue Mar 9 2021 12:56:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33319 * 125.95638 * 2 1 4 4 C 1.50702 * 122.71102 * 359.97438 * 3 2 1 5 5 O 1.42896 * 109.46948 * 113.56921 * 4 3 2 6 6 Si 1.86296 * 109.47428 * 233.57268 * 4 3 2 7 7 N 1.32119 * 114.58500 * 180.02562 * 3 2 1 8 8 C 1.29690 * 116.86521 * 0.02562 * 7 3 2 9 9 N 1.38610 * 124.95509 * 179.97438 * 8 7 3 10 10 C 1.46500 * 120.00246 * 179.97438 * 9 8 7 11 11 H 1.08998 * 112.84959 * 336.19373 * 10 9 8 12 12 C 1.53778 * 113.61159 * 107.49962 * 10 9 8 13 13 C 1.53785 * 87.08056 * 89.11678 * 12 10 9 14 14 H 1.08997 * 113.69040 * 270.86624 * 13 12 10 15 15 C 1.50698 * 113.61389 * 139.97960 * 13 12 10 16 16 C 1.38223 * 119.96951 * 142.50439 * 15 13 12 17 17 C 1.38320 * 120.01302 * 179.97438 * 16 15 13 18 18 Cl 1.73599 * 120.02619 * 179.97438 * 17 16 15 19 19 C 1.38546 * 119.94856 * 0.02562 * 17 16 15 20 20 F 1.35106 * 120.02683 * 179.97438 * 19 17 16 21 21 C 1.38439 * 119.94284 * 359.97438 * 19 17 16 22 22 C 1.38200 * 119.98827 * 0.27732 * 21 19 17 23 23 C 1.53778 * 113.61350 * 204.99773 * 10 9 8 24 24 S 1.70970 * 110.10066 * 0.23753 * 8 7 3 25 25 H 1.09000 * 109.46741 * 84.87949 * 1 2 3 26 26 H 1.08995 * 109.47006 * 204.88038 * 1 2 3 27 27 H 1.09001 * 109.46366 * 324.87886 * 1 2 3 28 28 H 1.09000 * 109.46733 * 353.57107 * 4 3 2 29 29 H 0.96703 * 114.00189 * 60.00276 * 5 4 3 30 30 H 1.48501 * 110.00018 * 180.02562 * 6 4 3 31 31 H 1.48505 * 109.99836 * 301.31619 * 6 4 3 32 32 H 0.97004 * 119.99542 * 359.97438 * 9 8 7 33 33 H 1.08995 * 113.61618 * 334.56814 * 12 10 9 34 34 H 1.09006 * 113.61127 * 203.66286 * 12 10 9 35 35 H 1.07996 * 119.99162 * 359.97438 * 16 15 13 36 36 H 1.08000 * 120.01279 * 180.02562 * 21 19 17 37 37 H 1.07998 * 119.97574 * 179.69539 * 22 21 19 38 38 H 1.09000 * 113.61555 * 156.33575 * 23 10 9 39 39 H 1.09003 * 113.61232 * 25.42862 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0792 0.0000 4 6 1.7416 2.4829 -0.0006 5 8 2.0697 3.1229 1.2342 6 14 2.4877 3.4405 -1.4138 7 7 3.5851 0.8187 -0.0005 8 6 3.9316 -0.4311 -0.0015 9 7 5.2385 -0.8929 -0.0027 10 6 5.5065 -2.3332 -0.0032 11 1 4.6808 -2.9175 0.4029 12 6 6.0346 -2.8610 -1.3475 13 6 7.4468 -2.5444 -0.8275 14 1 7.7792 -1.5309 -1.0521 15 6 8.4710 -3.5894 -1.1877 16 6 9.7576 -3.2094 -1.5207 17 6 10.6986 -4.1678 -1.8510 18 17 12.3143 -3.6908 -2.2699 19 6 10.3504 -5.5088 -1.8481 20 9 11.2681 -6.4463 -2.1709 21 6 9.0612 -5.8873 -1.5143 22 6 8.1216 -4.9272 -1.1898 23 6 6.8751 -2.7052 0.5910 24 16 2.5413 -1.4262 -0.0085 25 1 -0.3633 0.0917 -1.0236 26 1 -0.3633 -0.9322 0.4323 27 1 -0.3632 0.8406 0.5913 28 1 0.6583 2.4498 -0.1160 29 1 3.0196 3.1876 1.4035 30 1 1.9555 4.8268 -1.4249 31 1 3.9669 3.4659 -1.2851 32 1 5.9756 -0.2624 -0.0032 33 1 5.7376 -2.2533 -2.2022 34 1 5.8538 -3.9251 -1.5002 35 1 10.0281 -2.1638 -1.5231 36 1 8.7887 -6.9323 -1.5113 37 1 7.1147 -5.2223 -0.9341 38 1 6.9243 -3.7267 0.9684 39 1 7.2568 -1.9717 1.3013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10156536_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:21 Heat of formation + Delta-G solvation = 18.734190 kcal Electronic energy + Delta-G solvation = -25392.233011 eV Core-core repulsion = 21369.329293 eV Total energy + Delta-G solvation = -4022.903717 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.055 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -49.99376 -41.68887 -40.93397 -39.54645 -37.68984 -37.48687 -35.55726 -33.05211 -32.27822 -31.39436 -28.94597 -27.07008 -26.44520 -25.62806 -24.57674 -24.28308 -23.10717 -20.95495 -20.46619 -19.05168 -18.88557 -18.01355 -17.90265 -17.67181 -17.03450 -16.81942 -16.73286 -16.32730 -16.12052 -15.61691 -15.37907 -15.34162 -15.02875 -14.68300 -14.48248 -14.20864 -14.16203 -13.98793 -13.80289 -13.73279 -13.68105 -13.53449 -12.94253 -12.70647 -12.67297 -12.47230 -12.30192 -11.96344 -11.92875 -11.77011 -11.61256 -11.07151 -10.67330 -10.43879 -10.17312 -10.02281 -9.69625 -8.68038 -4.86555 -0.24769 -0.12493 -0.01198 0.15003 0.75392 0.91585 1.33222 1.75186 1.80584 1.86737 2.16621 2.18845 2.94590 3.07787 3.25720 3.28898 3.37951 3.46833 3.57992 3.61913 3.77337 3.84437 3.97280 4.02492 4.15033 4.19558 4.34275 4.38295 4.45769 4.47285 4.62943 4.63785 4.67504 4.69390 4.74251 4.80314 4.88957 4.90697 4.93596 5.19322 5.21826 5.48720 5.56110 6.20050 6.44684 6.90831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.241 4.241 3 C 0.074 3.926 4 C -0.036 4.036 5 O -0.526 6.526 6 Si 0.698 3.302 7 N -0.547 5.547 8 C 0.320 3.680 9 N -0.678 5.678 10 C 0.126 3.874 11 H 0.099 0.901 12 C -0.148 4.148 13 C -0.072 4.072 14 H 0.104 0.896 15 C -0.070 4.070 16 C -0.078 4.078 17 C -0.072 4.072 18 Cl -0.046 7.046 19 C 0.106 3.894 20 F -0.126 7.126 21 C -0.137 4.137 22 C -0.084 4.084 23 C -0.133 4.133 24 S 0.107 5.893 25 H 0.077 0.923 26 H 0.068 0.932 27 H 0.079 0.921 28 H 0.122 0.878 29 H 0.380 0.620 30 H -0.257 1.257 31 H -0.252 1.252 32 H 0.413 0.587 33 H 0.082 0.918 34 H 0.101 0.899 35 H 0.143 0.857 36 H 0.147 0.853 37 H 0.141 0.859 38 H 0.104 0.896 39 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.200 -3.111 -0.926 4.558 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.364 4.364 3 C -0.056 4.056 4 C -0.149 4.149 5 O -0.332 6.332 6 Si 0.597 3.403 7 N -0.273 5.273 8 C -0.051 4.051 9 N -0.318 5.318 10 C 0.019 3.981 11 H 0.117 0.883 12 C -0.187 4.187 13 C -0.090 4.090 14 H 0.122 0.878 15 C -0.071 4.071 16 C -0.097 4.097 17 C -0.099 4.099 18 Cl -0.017 7.017 19 C 0.086 3.914 20 F -0.104 7.104 21 C -0.156 4.156 22 C -0.102 4.102 23 C -0.171 4.171 24 S 0.356 5.644 25 H 0.096 0.904 26 H 0.087 0.913 27 H 0.098 0.902 28 H 0.140 0.860 29 H 0.228 0.772 30 H -0.182 1.182 31 H -0.176 1.176 32 H 0.251 0.749 33 H 0.101 0.899 34 H 0.119 0.881 35 H 0.161 0.839 36 H 0.165 0.835 37 H 0.159 0.841 38 H 0.123 0.877 39 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -2.895 -3.236 -1.162 4.495 hybrid contribution 1.226 0.868 0.955 1.780 sum -1.669 -2.369 -0.207 2.905 Atomic orbital electron populations 1.20212 0.86747 1.03290 1.02982 1.25126 1.01162 0.93087 1.17009 1.19978 0.86741 0.97096 1.01821 1.24631 1.04519 0.89868 0.95836 1.86568 1.29650 1.79803 1.37186 0.94780 0.81175 0.79979 0.84371 1.66034 1.17449 1.16822 1.26962 1.23230 0.91645 0.91582 0.98684 1.43555 1.01892 1.06079 1.80242 1.21954 0.98519 0.79998 0.97610 0.88308 1.23709 0.94308 1.02725 0.97970 1.21589 0.92761 0.97885 0.96756 0.87799 1.19667 0.93692 0.94361 0.99335 1.20901 0.91519 0.99398 0.97864 1.21052 0.89111 0.92790 1.06983 1.98418 1.19765 1.91825 1.91677 1.17481 0.87697 0.84505 1.01684 1.91571 1.65225 1.63681 1.89911 1.21180 0.90972 1.01763 1.01706 1.20990 0.99740 0.91612 0.97849 1.23454 0.93769 1.03728 0.96159 1.83922 0.96378 1.10200 1.73881 0.90413 0.91276 0.90220 0.86029 0.77200 1.18185 1.17556 0.74887 0.89901 0.88092 0.83935 0.83508 0.84115 0.87740 0.89841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.11 9.71 36.01 0.35 0.46 16 2 C -0.24 -0.20 6.57 -36.02 -0.24 -0.43 16 3 C 0.07 0.14 5.19 -84.19 -0.44 -0.30 16 4 C -0.04 -0.04 2.84 36.01 0.10 0.06 16 5 O -0.53 -1.50 12.88 -35.23 -0.45 -1.96 16 6 Si 0.70 0.52 32.62 -169.99 -5.54 -5.02 16 7 N -0.55 -1.37 9.77 -11.36 -0.11 -1.49 16 8 C 0.32 0.25 8.24 -87.68 -0.72 -0.48 16 9 N -0.68 1.18 5.42 -54.99 -0.30 0.88 16 10 C 0.13 -0.47 4.31 -67.12 -0.29 -0.76 16 11 H 0.10 -0.38 7.06 -51.93 -0.37 -0.75 16 12 C -0.15 0.63 7.25 -25.92 -0.19 0.44 16 13 C -0.07 0.30 3.86 -90.96 -0.35 -0.05 16 14 H 0.10 -0.45 8.09 -51.93 -0.42 -0.87 16 15 C -0.07 0.18 5.29 -104.62 -0.55 -0.37 16 16 C -0.08 0.10 9.49 -39.56 -0.38 -0.28 16 17 C -0.07 -0.05 6.33 -39.44 -0.25 -0.30 16 18 Cl -0.05 -0.08 28.62 -51.86 -1.48 -1.56 16 19 C 0.11 0.10 7.28 -39.39 -0.29 -0.19 16 20 F -0.13 -0.33 16.84 2.25 0.04 -0.29 16 21 C -0.14 0.20 10.03 -39.52 -0.40 -0.19 16 22 C -0.08 0.25 8.62 -39.59 -0.34 -0.09 16 23 C -0.13 0.60 7.29 -25.92 -0.19 0.42 16 24 S 0.11 -0.02 21.69 -107.50 -2.33 -2.35 16 25 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.08 -0.12 7.17 -51.93 -0.37 -0.50 16 28 H 0.12 -0.06 6.33 -51.93 -0.33 -0.39 16 29 H 0.38 0.43 8.70 45.56 0.40 0.82 16 30 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 31 H -0.25 -0.96 7.11 56.52 0.40 -0.55 16 32 H 0.41 -0.91 8.83 -40.82 -0.36 -1.27 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 34 H 0.10 -0.54 6.29 -51.93 -0.33 -0.86 16 35 H 0.14 -0.36 8.05 -52.49 -0.42 -0.78 16 36 H 0.15 -0.47 8.06 -52.49 -0.42 -0.89 16 37 H 0.14 -0.77 6.64 -52.49 -0.35 -1.11 16 38 H 0.10 -0.54 7.73 -51.93 -0.40 -0.94 16 39 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 LS Contribution 359.85 15.07 5.42 5.42 Total: 0.00 -6.42 359.85 -13.19 -19.61 By element: Atomic # 1 Polarization: -6.91 SS G_CDS: -4.26 Total: -11.18 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -4.16 Total: -2.07 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -0.41 Total: -0.60 kcal Atomic # 8 Polarization: -1.50 SS G_CDS: -0.45 Total: -1.96 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: 0.52 SS G_CDS: -5.54 Total: -5.02 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.33 Total: -2.35 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.48 Total: -1.56 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -6.42 -13.19 -19.61 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10156536_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.346 kcal (2) G-P(sol) polarization free energy of solvation -6.424 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.612 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.734 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds