Wall clock time and date at job start Tue Mar 9 2021 12:56:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.47317 * 2 1 4 4 C 1.50698 * 109.47001 * 240.00195 * 2 1 3 5 5 C 1.38606 * 120.71784 * 299.99519 * 4 2 1 6 6 N 1.32281 * 119.19349 * 179.97438 * 5 4 2 7 7 C 1.32485 * 120.74418 * 0.02562 * 6 5 4 8 8 N 1.38401 * 119.22118 * 180.02562 * 7 6 5 9 9 C 1.46500 * 120.00396 * 179.97438 * 8 7 6 10 10 H 1.09000 * 109.47175 * 34.99783 * 9 8 7 11 11 C 1.53006 * 109.46998 * 154.99651 * 9 8 7 12 12 C 1.52999 * 109.46626 * 179.97438 * 11 9 8 13 13 C 1.52997 * 109.47592 * 300.00035 * 12 11 9 14 14 H 1.09000 * 109.47140 * 300.00346 * 13 12 11 15 15 N 1.46500 * 109.47204 * 180.02562 * 13 12 11 16 16 C 1.39004 * 119.99958 * 85.00078 * 15 13 12 17 17 N 1.32399 * 119.70508 * 179.97438 * 16 15 13 18 18 C 1.31970 * 121.62560 * 180.02562 * 17 16 15 19 19 C 1.38026 * 120.85423 * 359.97438 * 18 17 16 20 20 C 1.38889 * 119.32772 * 0.02562 * 19 18 17 21 21 C 1.38298 * 118.50686 * 359.73519 * 20 19 18 22 22 C 1.52996 * 109.47165 * 60.00300 * 13 12 11 23 23 C 1.52997 * 109.47204 * 274.99678 * 9 8 7 24 24 N 1.32500 * 121.56610 * 0.27227 * 7 6 5 25 25 C 1.32282 * 120.73597 * 359.44794 * 24 7 6 26 26 H 0.96698 * 114.00299 * 59.99373 * 1 2 3 27 27 H 1.08997 * 109.47605 * 119.99742 * 2 1 3 28 28 H 1.48501 * 109.99914 * 298.68254 * 3 2 1 29 29 H 1.48498 * 110.00229 * 60.00040 * 3 2 1 30 30 H 1.07999 * 120.40202 * 359.96457 * 5 4 2 31 31 H 0.97001 * 119.99722 * 359.97438 * 8 7 6 32 32 H 1.08993 * 109.46955 * 300.00226 * 11 9 8 33 33 H 1.09000 * 109.47050 * 60.00054 * 11 9 8 34 34 H 1.09000 * 109.47160 * 60.00369 * 12 11 9 35 35 H 1.09002 * 109.46719 * 180.02562 * 12 11 9 36 36 H 0.97001 * 119.99882 * 265.00024 * 15 13 12 37 37 H 1.07998 * 119.57735 * 180.02562 * 18 17 16 38 38 H 1.07993 * 120.33251 * 180.02562 * 19 18 17 39 39 H 1.07995 * 120.74407 * 180.02562 * 20 19 18 40 40 H 1.07995 * 120.45400 * 180.28196 * 21 20 19 41 41 H 1.08992 * 109.47534 * 180.02562 * 22 13 12 42 42 H 1.08996 * 109.47134 * 59.99508 * 22 13 12 43 43 H 1.09000 * 109.47140 * 300.00127 * 23 9 8 44 44 H 1.09001 * 109.47230 * 59.99271 * 23 9 8 45 45 H 1.07998 * 120.39671 * 180.24750 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6056 -2.0371 -1.4646 6 7 2.0625 -2.6310 -2.5547 7 6 2.8231 -1.9723 -3.4166 8 7 3.2835 -2.6243 -4.5472 9 6 4.1252 -1.9122 -5.5119 10 1 4.7713 -1.2116 -4.9829 11 6 4.9848 -2.9187 -6.2795 12 6 5.8633 -2.1749 -7.2874 13 6 4.9755 -1.4085 -8.2699 14 1 4.3295 -2.1094 -8.7987 15 7 5.8168 -0.6969 -9.2354 16 6 6.2787 -1.3525 -10.3708 17 7 7.0382 -0.7036 -11.2397 18 6 7.4968 -1.2886 -12.3301 19 6 7.1986 -2.6080 -12.6044 20 6 6.4047 -3.3244 -11.7181 21 6 5.9428 -2.6861 -10.5815 22 6 4.1160 -0.4021 -7.5024 23 6 3.2379 -1.1454 -6.4945 24 7 3.1574 -0.7054 -3.2195 25 6 2.7293 -0.0513 -2.1524 26 1 -0.3934 0.4418 -0.7650 27 1 1.7924 -0.5138 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5616 2.4680 1.2085 30 1 0.9865 -2.5795 -0.7654 31 1 3.0489 -3.5529 -4.7009 32 1 5.6168 -3.4650 -5.5795 33 1 4.3387 -3.6193 -6.8085 34 1 6.5093 -1.4741 -6.7587 35 1 6.4753 -2.8920 -7.8345 36 1 6.0515 0.2318 -9.0823 37 1 8.1142 -0.7280 -13.0164 38 1 7.5788 -3.0785 -13.4990 39 1 6.1575 -4.3581 -11.9099 40 1 5.3271 -3.2146 -9.8689 41 1 3.4833 0.1436 -8.2023 42 1 4.7621 0.2987 -6.9737 43 1 2.5918 -1.8459 -7.0236 44 1 2.6254 -0.4284 -5.9477 45 1 3.0019 0.9824 -1.9992 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10173614_12175864.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:27 Heat of formation + Delta-G solvation = 70.619319 kcal Electronic energy + Delta-G solvation = -27023.915070 eV Core-core repulsion = 23236.009812 eV Total energy + Delta-G solvation = -3787.905258 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.164 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.13069 -41.23899 -40.04640 -38.26268 -37.08904 -35.01833 -34.65965 -33.26862 -32.52519 -31.98116 -30.68827 -28.73327 -26.49995 -25.84542 -24.65808 -24.12011 -23.55943 -23.13189 -22.29818 -21.22379 -19.39546 -18.74987 -18.57842 -18.17093 -17.80341 -16.95998 -16.61760 -16.43443 -16.18142 -15.95219 -15.89244 -15.75526 -15.53614 -15.41147 -15.00671 -14.66631 -14.53806 -14.22830 -14.02306 -13.87777 -13.85723 -13.39932 -13.22881 -12.95056 -12.51292 -12.40400 -12.31267 -12.24833 -12.19578 -11.85985 -11.75676 -11.48019 -11.32378 -11.00929 -10.73812 -10.60921 -10.29832 -10.03065 -9.13030 -8.63771 -5.05056 0.05736 0.15491 0.42155 0.60386 1.20020 1.50437 1.74074 1.89849 2.14705 2.81248 3.07218 3.12622 3.28903 3.43036 3.55787 3.59838 3.68931 3.70800 3.74804 3.83458 3.93671 4.02583 4.03181 4.16088 4.19989 4.24023 4.27834 4.30387 4.39309 4.44521 4.51478 4.55732 4.63274 4.75346 4.81137 4.87194 4.89017 4.95833 4.98498 5.11554 5.14967 5.16500 5.29279 5.45201 5.68785 5.76836 5.99805 6.10460 6.31961 6.39156 6.63214 7.28703 7.31207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.677 3.323 4 C -0.293 4.293 5 C 0.223 3.777 6 N -0.570 5.570 7 C 0.568 3.432 8 N -0.692 5.692 9 C 0.159 3.841 10 H 0.096 0.904 11 C -0.125 4.125 12 C -0.130 4.130 13 C 0.154 3.846 14 H 0.083 0.917 15 N -0.722 5.722 16 C 0.404 3.596 17 N -0.547 5.547 18 C 0.149 3.851 19 C -0.236 4.236 20 C -0.034 4.034 21 C -0.242 4.242 22 C -0.122 4.122 23 C -0.124 4.124 24 N -0.561 5.561 25 C 0.199 3.801 26 H 0.376 0.624 27 H 0.120 0.880 28 H -0.258 1.258 29 H -0.253 1.253 30 H 0.170 0.830 31 H 0.414 0.586 32 H 0.075 0.925 33 H 0.071 0.929 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.405 0.595 37 H 0.155 0.845 38 H 0.131 0.869 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.074 0.926 42 H 0.074 0.926 43 H 0.066 0.934 44 H 0.074 0.926 45 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.331 -0.911 0.072 1.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.578 3.422 4 C -0.301 4.301 5 C 0.055 3.945 6 N -0.291 5.291 7 C 0.212 3.788 8 N -0.327 5.327 9 C 0.054 3.946 10 H 0.114 0.886 11 C -0.164 4.164 12 C -0.170 4.170 13 C 0.049 3.951 14 H 0.101 0.899 15 N -0.354 5.354 16 C 0.168 3.832 17 N -0.264 5.264 18 C -0.008 4.008 19 C -0.259 4.259 20 C -0.060 4.060 21 C -0.267 4.267 22 C -0.160 4.160 23 C -0.164 4.164 24 N -0.283 5.283 25 C 0.031 3.969 26 H 0.223 0.777 27 H 0.138 0.862 28 H -0.182 1.182 29 H -0.178 1.178 30 H 0.187 0.813 31 H 0.251 0.749 32 H 0.094 0.906 33 H 0.090 0.910 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.240 0.760 37 H 0.172 0.828 38 H 0.149 0.851 39 H 0.149 0.851 40 H 0.148 0.852 41 H 0.093 0.907 42 H 0.093 0.907 43 H 0.085 0.915 44 H 0.093 0.907 45 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.769 -0.029 -0.078 1.771 hybrid contribution -1.617 -0.685 0.024 1.756 sum 0.152 -0.713 -0.054 0.731 Atomic orbital electron populations 1.86609 1.17779 1.79839 1.49370 1.24668 0.83745 1.10492 0.97487 0.95257 0.91532 0.74593 0.80816 1.21650 1.08203 0.98345 1.01937 1.22837 0.90220 0.90589 0.90857 1.67992 1.16071 1.39375 1.05675 1.19400 0.86786 0.85691 0.86941 1.44265 1.54241 1.14571 1.19665 1.21045 0.91073 0.93977 0.88487 0.88613 1.21787 0.98523 0.97925 0.98182 1.21984 0.98265 0.99917 0.96812 1.21034 0.91087 0.94253 0.88746 0.89949 1.44548 1.55372 1.14753 1.20680 1.18374 0.89423 0.88590 0.86802 1.67171 1.14889 1.39220 1.05142 1.22428 0.94260 0.92224 0.91937 1.21859 1.04885 0.96532 1.02630 1.21358 0.92898 0.99627 0.92120 1.21431 1.08586 0.94945 1.01749 1.21717 0.98464 0.97901 0.97955 1.21879 0.98169 0.99751 0.96579 1.67939 1.28224 1.08464 1.23666 1.22791 0.88536 0.98853 0.86708 0.77659 0.86198 1.18232 1.17764 0.81284 0.74859 0.90590 0.91029 0.90855 0.90796 0.75966 0.82781 0.85113 0.85075 0.85209 0.90722 0.90686 0.91540 0.90748 0.81710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.01 12.79 -35.23 -0.45 -0.44 16 2 C -0.05 0.08 2.85 36.00 0.10 0.18 16 3 Si 0.68 -1.40 29.87 -169.99 -5.08 -6.48 16 4 C -0.29 0.15 5.40 -104.35 -0.56 -0.41 16 5 C 0.22 0.14 10.92 -17.22 -0.19 -0.05 16 6 N -0.57 -1.27 10.46 -13.93 -0.15 -1.42 16 7 C 0.57 0.99 8.40 -322.82 -2.71 -1.72 16 8 N -0.69 0.30 5.22 -55.79 -0.29 0.01 16 9 C 0.16 -0.28 2.45 -67.93 -0.17 -0.44 16 10 H 0.10 -0.05 7.50 -51.93 -0.39 -0.44 16 11 C -0.13 0.37 5.39 -26.73 -0.14 0.23 16 12 C -0.13 0.30 5.41 -26.73 -0.14 0.16 16 13 C 0.15 -0.31 2.14 -67.93 -0.15 -0.45 16 14 H 0.08 -0.16 6.46 -51.93 -0.34 -0.49 16 15 N -0.72 0.02 5.25 -53.93 -0.28 -0.26 16 16 C 0.40 0.86 7.63 -155.02 -1.18 -0.32 16 17 N -0.55 -1.89 10.39 -12.44 -0.13 -2.02 16 18 C 0.15 0.26 11.17 -17.57 -0.20 0.06 16 19 C -0.24 -0.16 10.10 -39.42 -0.40 -0.56 16 20 C -0.03 -0.02 10.17 -39.32 -0.40 -0.42 16 21 C -0.24 -0.22 8.82 -39.23 -0.35 -0.56 16 22 C -0.12 0.28 5.39 -26.76 -0.14 0.14 16 23 C -0.12 0.22 5.50 -26.76 -0.15 0.07 16 24 N -0.56 -0.80 9.20 -13.93 -0.13 -0.93 16 25 C 0.20 -0.04 9.92 -17.22 -0.17 -0.21 16 26 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 27 H 0.12 -0.28 7.96 -51.93 -0.41 -0.70 16 28 H -0.26 0.04 7.11 56.52 0.40 0.44 16 29 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 30 H 0.17 -0.17 8.06 -52.49 -0.42 -0.59 16 31 H 0.41 -0.59 8.72 -40.82 -0.36 -0.94 16 32 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.07 -0.11 7.63 -51.93 -0.40 -0.51 16 36 H 0.40 -0.11 8.73 -40.82 -0.36 -0.46 16 37 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 38 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 39 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 40 H 0.13 -0.11 6.05 -52.49 -0.32 -0.43 16 41 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 43 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 45 H 0.17 -0.43 5.04 -52.49 -0.26 -0.69 16 LS Contribution 365.07 15.07 5.50 5.50 Total: 0.00 -7.20 365.07 -14.23 -21.43 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -6.28 Total: -11.09 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -6.95 Total: -4.30 kcal Atomic # 7 Polarization: -3.64 SS G_CDS: -0.98 Total: -4.62 kcal Atomic # 8 Polarization: 0.01 SS G_CDS: -0.45 Total: -0.44 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.08 Total: -6.48 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -7.20 -14.23 -21.43 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10173614_12175864.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.052 kcal (2) G-P(sol) polarization free energy of solvation -7.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.432 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.619 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds