Wall clock time and date at job start Tue Mar 9 2021 12:56:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.33329 * 125.95450 * 2 1 4 4 C 1.50701 * 122.70947 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.47139 * 113.26256 * 4 3 2 6 6 Si 1.86300 * 109.47133 * 233.26140 * 4 3 2 7 7 N 1.32122 * 114.58212 * 179.75314 * 3 2 1 8 8 C 1.29694 * 116.86114 * 0.23895 * 7 3 2 9 9 N 1.38610 * 124.94243 * 180.02562 * 8 7 3 10 10 C 1.46507 * 119.99783 * 180.02562 * 9 8 7 11 11 H 1.08996 * 109.46626 * 35.00353 * 10 9 8 12 12 C 1.52995 * 109.46995 * 155.00286 * 10 9 8 13 13 C 1.53002 * 109.47009 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.46855 * 299.99911 * 13 12 10 15 15 H 1.09003 * 109.47270 * 300.00076 * 14 13 12 16 16 N 1.46507 * 109.47169 * 180.02562 * 14 13 12 17 17 C 1.38996 * 119.99955 * 154.99871 * 16 14 13 18 18 N 1.32404 * 119.70453 * 179.72632 * 17 16 14 19 19 C 1.31972 * 121.62364 * 179.71366 * 18 17 16 20 20 C 1.38022 * 120.85401 * 0.56458 * 19 18 17 21 21 C 1.38882 * 119.32826 * 359.72627 * 20 19 18 22 22 C 1.38296 * 118.51080 * 359.97438 * 21 20 19 23 23 C 1.52995 * 109.47239 * 60.00230 * 14 13 12 24 24 C 1.52998 * 109.47169 * 275.00380 * 10 9 8 25 25 S 1.70957 * 110.10532 * 0.02562 * 8 7 3 26 26 H 1.09007 * 109.46977 * 84.87609 * 1 2 3 27 27 H 1.08990 * 109.47522 * 204.87941 * 1 2 3 28 28 H 1.09008 * 109.46854 * 324.87830 * 1 2 3 29 29 H 1.09003 * 109.47105 * 353.25837 * 4 3 2 30 30 H 0.96695 * 113.99907 * 59.99956 * 5 4 3 31 31 H 1.48498 * 110.00218 * 179.97438 * 6 4 3 32 32 H 1.48498 * 110.00185 * 301.32013 * 6 4 3 33 33 H 0.96995 * 120.00371 * 0.02562 * 9 8 7 34 34 H 1.08999 * 109.47350 * 300.00361 * 12 10 9 35 35 H 1.09003 * 109.47115 * 60.00301 * 12 10 9 36 36 H 1.08996 * 109.46926 * 59.99875 * 13 12 10 37 37 H 1.08997 * 109.47201 * 180.02562 * 13 12 10 38 38 H 0.97003 * 119.99360 * 335.00109 * 16 14 13 39 39 H 1.07995 * 119.57050 * 180.28874 * 19 18 17 40 40 H 1.07995 * 120.33405 * 179.74938 * 20 19 18 41 41 H 1.08010 * 120.74359 * 180.02562 * 21 20 19 42 42 H 1.08003 * 120.45477 * 180.02562 * 22 21 20 43 43 H 1.08996 * 109.47379 * 59.99523 * 23 14 13 44 44 H 1.09000 * 109.47443 * 180.02562 * 23 14 13 45 45 H 1.09003 * 109.47270 * 299.99901 * 24 10 9 46 46 H 1.09006 * 109.46952 * 59.99988 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7415 2.4830 0.0006 5 8 2.0643 3.1200 1.2383 6 14 2.4937 3.4441 -1.4070 7 7 3.5851 0.8188 0.0052 8 6 3.9314 -0.4311 0.0047 9 7 5.2384 -0.8927 0.0101 10 6 5.5065 -2.3330 0.0084 11 1 4.7483 -2.8429 -0.5858 12 6 6.8881 -2.5938 -0.5949 13 6 7.1678 -4.0981 -0.5973 14 6 7.1302 -4.6260 0.8382 15 1 7.8885 -4.1163 1.4328 16 7 7.3987 -6.0663 0.8361 17 6 7.9250 -6.6768 1.9685 18 7 8.1602 -7.9797 1.9620 19 6 8.6643 -8.5971 3.0138 20 6 8.9553 -7.9023 4.1703 21 6 8.7179 -6.5348 4.2203 22 6 8.1949 -5.9143 3.1005 23 6 5.7487 -4.3652 1.4416 24 6 5.4691 -2.8605 1.4441 25 16 2.5413 -1.4261 -0.0035 26 1 -0.3633 0.0918 -1.0236 27 1 -0.3634 -0.9322 0.4323 28 1 -0.3633 0.8406 0.5913 29 1 0.6586 2.4501 -0.1197 30 1 3.0134 3.1843 1.4118 31 1 1.9606 4.8300 -1.4179 32 1 3.9723 3.4692 -1.2720 33 1 5.9755 -0.2622 0.0151 34 1 6.9147 -2.2180 -1.6177 35 1 7.6463 -2.0839 -0.0006 36 1 6.4096 -4.6077 -1.1918 37 1 8.1522 -4.2839 -1.0267 38 1 7.2092 -6.5937 0.0443 39 1 8.8473 -9.6606 2.9706 40 1 9.3638 -8.4167 5.0275 41 1 8.9375 -5.9686 5.1135 42 1 7.9984 -4.8523 3.1048 43 1 4.9905 -4.8748 0.8471 44 1 5.7220 -4.7409 2.4644 45 1 6.2273 -2.3505 2.0385 46 1 4.4848 -2.6746 1.8740 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10173614_15704122.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:37 Heat of formation + Delta-G solvation = 54.214897 kcal Electronic energy + Delta-G solvation = -27511.838261 eV Core-core repulsion = 23722.262191 eV Total energy + Delta-G solvation = -3789.576069 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.141 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.37966 -40.99959 -40.17246 -37.83527 -37.03022 -35.01082 -33.37029 -32.97029 -32.16821 -30.90158 -29.28157 -28.27047 -25.70989 -24.94554 -24.35633 -24.18041 -23.45308 -22.60404 -21.51664 -20.36672 -19.13742 -18.64473 -17.98238 -17.84757 -17.42792 -17.08045 -16.56843 -16.33983 -16.00550 -15.87730 -15.69507 -15.53279 -15.34504 -15.07300 -14.85582 -14.32836 -14.14426 -14.12881 -13.91122 -13.81341 -13.76517 -13.55314 -13.52525 -13.14348 -12.89722 -12.83164 -12.45867 -12.41321 -12.24737 -11.95592 -11.82194 -11.68947 -11.19965 -11.02779 -10.64990 -10.63532 -10.39900 -10.33722 -9.98481 -8.68909 -8.64205 -4.85444 0.02160 0.18577 0.38454 0.56612 0.78604 1.35016 1.78191 1.82128 1.89137 2.09769 2.20137 3.03183 3.27209 3.33273 3.39163 3.63363 3.67644 3.74945 3.75798 3.83934 3.95833 3.99565 4.06168 4.07802 4.14736 4.19428 4.21938 4.35045 4.35135 4.43967 4.48361 4.53251 4.60512 4.65495 4.75469 4.79935 4.83496 4.87070 4.90113 4.94375 4.97065 5.08902 5.12087 5.22808 5.41742 5.56460 5.64325 6.05084 6.25053 6.45970 6.57403 6.94531 7.26834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.243 4.243 3 C 0.074 3.926 4 C -0.036 4.036 5 O -0.526 6.526 6 Si 0.698 3.302 7 N -0.549 5.549 8 C 0.320 3.680 9 N -0.692 5.692 10 C 0.151 3.849 11 H 0.084 0.916 12 C -0.120 4.120 13 C -0.122 4.122 14 C 0.154 3.846 15 H 0.084 0.916 16 N -0.722 5.722 17 C 0.403 3.597 18 N -0.546 5.546 19 C 0.149 3.851 20 C -0.235 4.235 21 C -0.034 4.034 22 C -0.242 4.242 23 C -0.133 4.133 24 C -0.135 4.135 25 S 0.104 5.896 26 H 0.077 0.923 27 H 0.068 0.932 28 H 0.079 0.921 29 H 0.122 0.878 30 H 0.380 0.620 31 H -0.257 1.257 32 H -0.252 1.252 33 H 0.412 0.588 34 H 0.081 0.919 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.081 0.919 38 H 0.405 0.595 39 H 0.155 0.845 40 H 0.131 0.869 41 H 0.132 0.868 42 H 0.130 0.870 43 H 0.072 0.928 44 H 0.074 0.926 45 H 0.073 0.927 46 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.490 -2.175 -1.637 2.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.366 4.366 3 C -0.056 4.056 4 C -0.149 4.149 5 O -0.332 6.332 6 Si 0.597 3.403 7 N -0.275 5.275 8 C -0.051 4.051 9 N -0.332 5.332 10 C 0.046 3.954 11 H 0.102 0.898 12 C -0.159 4.159 13 C -0.161 4.161 14 C 0.048 3.952 15 H 0.102 0.898 16 N -0.354 5.354 17 C 0.168 3.832 18 N -0.264 5.264 19 C -0.008 4.008 20 C -0.258 4.258 21 C -0.060 4.060 22 C -0.267 4.267 23 C -0.173 4.173 24 C -0.175 4.175 25 S 0.353 5.647 26 H 0.095 0.905 27 H 0.087 0.913 28 H 0.098 0.902 29 H 0.139 0.861 30 H 0.228 0.772 31 H -0.182 1.182 32 H -0.176 1.176 33 H 0.250 0.750 34 H 0.100 0.900 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.099 0.901 38 H 0.240 0.760 39 H 0.173 0.827 40 H 0.149 0.851 41 H 0.149 0.851 42 H 0.148 0.852 43 H 0.091 0.909 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.405 -2.589 -2.562 3.665 hybrid contribution 0.829 1.278 1.668 2.259 sum 1.234 -1.310 -0.894 2.010 Atomic orbital electron populations 1.20203 0.86796 1.03256 1.02933 1.25108 1.01123 0.93091 1.17282 1.19983 0.86806 0.97057 1.01738 1.24628 1.04568 0.89964 0.95701 1.86565 1.29721 1.79949 1.36978 0.94767 0.81130 0.79900 0.84503 1.66056 1.17376 1.16812 1.27225 1.23267 0.91823 0.91510 0.98509 1.44017 1.01796 1.06876 1.80466 1.21206 0.98427 0.78927 0.96888 0.89772 1.21706 0.95419 0.96343 1.02405 1.21727 1.03580 0.94960 0.95811 1.21025 0.96806 0.80183 0.97149 0.89798 1.44507 1.69340 1.07675 1.13907 1.18356 0.89464 0.88541 0.86854 1.67171 1.19365 1.08723 1.31100 1.22433 0.91210 0.99720 0.87480 1.21867 1.08047 0.95339 1.00529 1.21365 0.92692 0.94600 0.97345 1.21430 1.09975 1.00972 0.94293 1.22032 0.97355 0.95369 1.02494 1.22051 1.03289 0.95631 0.96486 1.83956 0.96504 1.10262 1.73996 0.90482 0.91323 0.90223 0.86053 0.77214 1.18192 1.17555 0.75036 0.90011 0.90471 0.90582 0.90072 0.75953 0.82738 0.85071 0.85054 0.85234 0.90928 0.90763 0.90815 0.90896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.07 9.71 36.00 0.35 0.42 16 2 C -0.24 -0.32 6.57 -36.02 -0.24 -0.56 16 3 C 0.07 0.17 5.19 -84.18 -0.44 -0.26 16 4 C -0.04 -0.06 2.83 36.01 0.10 0.05 16 5 O -0.53 -1.65 12.88 -35.23 -0.45 -2.11 16 6 Si 0.70 0.71 32.62 -169.99 -5.54 -4.84 16 7 N -0.55 -1.62 9.77 -11.36 -0.11 -1.74 16 8 C 0.32 0.41 8.22 -87.67 -0.72 -0.31 16 9 N -0.69 0.83 5.23 -55.79 -0.29 0.54 16 10 C 0.15 -0.45 2.40 -67.93 -0.16 -0.61 16 11 H 0.08 -0.22 7.26 -51.93 -0.38 -0.60 16 12 C -0.12 0.51 5.39 -26.73 -0.14 0.37 16 13 C -0.12 0.50 5.39 -26.73 -0.14 0.35 16 14 C 0.15 -0.44 2.14 -67.93 -0.15 -0.59 16 15 H 0.08 -0.23 6.45 -51.93 -0.33 -0.56 16 16 N -0.72 0.53 5.25 -53.93 -0.28 0.25 16 17 C 0.40 0.68 7.63 -155.02 -1.18 -0.50 16 18 N -0.55 -1.68 10.39 -12.44 -0.13 -1.81 16 19 C 0.15 0.22 11.17 -17.57 -0.20 0.02 16 20 C -0.24 -0.11 10.10 -39.42 -0.40 -0.51 16 21 C -0.03 -0.01 10.17 -39.32 -0.40 -0.41 16 22 C -0.24 -0.15 8.83 -39.23 -0.35 -0.50 16 23 C -0.13 0.35 5.42 -26.71 -0.14 0.21 16 24 C -0.13 0.37 5.51 -26.71 -0.15 0.22 16 25 S 0.10 0.04 21.68 -107.50 -2.33 -2.29 16 26 H 0.08 -0.18 8.14 -51.92 -0.42 -0.61 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.08 -0.09 7.18 -51.92 -0.37 -0.46 16 29 H 0.12 -0.02 6.34 -51.93 -0.33 -0.35 16 30 H 0.38 0.53 8.70 45.56 0.40 0.93 16 31 H -0.26 -0.87 7.11 56.52 0.40 -0.47 16 32 H -0.25 -1.02 7.11 56.52 0.40 -0.62 16 33 H 0.41 -0.73 8.73 -40.82 -0.36 -1.08 16 34 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 35 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.40 -0.43 8.73 -40.82 -0.36 -0.79 16 39 H 0.16 -0.14 8.06 -52.49 -0.42 -0.56 16 40 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 41 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 42 H 0.13 -0.14 6.08 -52.48 -0.32 -0.46 16 43 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 44 H 0.07 -0.11 7.66 -51.93 -0.40 -0.51 16 45 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 46 H 0.07 -0.10 8.04 -51.93 -0.42 -0.52 16 LS Contribution 383.17 15.07 5.77 5.77 Total: 0.00 -7.10 383.17 -14.44 -21.53 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -6.71 Total: -12.72 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.36 Total: -2.60 kcal Atomic # 7 Polarization: -1.94 SS G_CDS: -0.81 Total: -2.76 kcal Atomic # 8 Polarization: -1.65 SS G_CDS: -0.45 Total: -2.11 kcal Atomic # 14 Polarization: 0.71 SS G_CDS: -5.54 Total: -4.84 kcal Atomic # 16 Polarization: 0.04 SS G_CDS: -2.33 Total: -2.29 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -7.10 -14.44 -21.53 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10173614_15704122.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.749 kcal (2) G-P(sol) polarization free energy of solvation -7.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.534 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds