Wall clock time and date at job start Tue Mar 9 2021 13:16:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53002 * 109.47126 * 2 1 4 4 C 1.52993 * 109.47312 * 120.00306 * 2 1 3 5 5 C 1.52995 * 109.47338 * 175.00009 * 4 2 1 6 6 O 1.42903 * 109.47180 * 180.02562 * 5 4 2 7 7 C 1.42903 * 113.99767 * 179.97438 * 6 5 4 8 8 H 1.08992 * 109.47388 * 329.99699 * 7 6 5 9 9 C 1.53002 * 109.46923 * 89.99668 * 7 6 5 10 10 C 1.52997 * 109.46817 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47452 * 300.00239 * 10 9 7 12 12 H 1.09002 * 109.46935 * 300.00125 * 11 10 9 13 13 N 1.46496 * 109.47414 * 180.02562 * 11 10 9 14 14 C 1.38401 * 120.00186 * 154.99801 * 13 11 10 15 15 N 1.32496 * 119.21817 * 359.73015 * 14 13 11 16 16 C 1.32283 * 120.74116 * 179.71742 * 15 14 13 17 17 C 1.38603 * 119.19232 * 0.54526 * 16 15 14 18 18 C 1.50697 * 120.71532 * 179.75502 * 17 16 15 19 19 O 1.42904 * 109.47403 * 119.97782 * 18 17 16 20 20 Si 1.86303 * 109.47384 * 359.97289 * 18 17 16 21 21 C 1.38606 * 118.56216 * 359.72932 * 17 16 15 22 22 N 1.32271 * 119.19729 * 0.02562 * 21 17 16 23 23 C 1.52999 * 109.47159 * 59.99536 * 11 10 9 24 24 C 1.52997 * 109.47317 * 300.00546 * 23 11 10 25 25 H 1.08996 * 109.47017 * 299.99977 * 1 2 3 26 26 H 1.09011 * 109.47134 * 59.99784 * 1 2 3 27 27 H 1.08994 * 109.47416 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.46665 * 240.00612 * 2 1 3 29 29 H 1.08996 * 109.46908 * 180.02562 * 3 2 1 30 30 H 1.09003 * 109.47278 * 299.99774 * 3 2 1 31 31 H 1.08996 * 109.47154 * 60.00107 * 3 2 1 32 32 H 1.09005 * 109.47276 * 54.99453 * 4 2 1 33 33 H 1.09004 * 109.46789 * 294.99761 * 4 2 1 34 34 H 1.08996 * 109.47297 * 59.99412 * 5 4 2 35 35 H 1.09004 * 109.46978 * 299.99637 * 5 4 2 36 36 H 1.08993 * 109.47662 * 299.99887 * 9 7 6 37 37 H 1.09002 * 109.47075 * 60.00393 * 9 7 6 38 38 H 1.09002 * 109.47153 * 60.00231 * 10 9 7 39 39 H 1.09001 * 109.47289 * 180.02562 * 10 9 7 40 40 H 0.97007 * 119.99693 * 334.99885 * 13 11 10 41 41 H 1.07992 * 120.40132 * 180.25075 * 16 15 14 42 42 H 1.09010 * 109.46986 * 239.97346 * 18 17 16 43 43 H 0.96698 * 113.99539 * 299.99273 * 19 18 17 44 44 H 1.48501 * 109.99471 * 58.68566 * 20 18 17 45 45 H 1.48499 * 109.99774 * 180.02562 * 20 18 17 46 46 H 1.07997 * 120.39936 * 179.97438 * 21 17 16 47 47 H 1.08996 * 109.46929 * 179.97438 * 23 11 10 48 48 H 1.09002 * 109.46716 * 60.00455 * 23 11 10 49 49 H 1.09002 * 109.47153 * 299.99641 * 24 23 11 50 50 H 1.09001 * 109.46832 * 179.97438 * 24 23 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2491 5 6 3.5648 -0.8311 1.1879 6 8 4.0411 -1.5053 2.3543 7 6 5.4610 -1.6616 2.3962 8 1 5.8485 -1.7358 1.3802 9 6 6.0868 -0.4522 3.0938 10 6 7.6069 -0.6198 3.1392 11 6 7.9568 -1.8925 3.9131 12 1 7.5689 -1.8181 4.9290 13 7 9.4123 -2.0527 3.9571 14 6 9.9980 -2.7784 4.9797 15 7 9.2281 -3.3170 5.9138 16 6 9.7555 -4.0211 6.9017 17 6 11.1310 -4.1821 6.9578 18 6 11.7687 -4.9727 8.0710 19 8 12.4905 -6.0757 7.5190 20 14 10.4457 -5.6081 9.2184 21 6 11.9072 -3.6006 5.9675 22 7 11.3159 -2.9131 5.0046 23 6 7.3308 -3.1019 3.2156 24 6 5.8108 -2.9342 3.1702 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 1.8933 -0.5138 -0.8901 29 1 3.1300 1.4425 -0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6054 -1.7198 1.2951 33 1 1.7517 -0.1583 2.1369 34 1 3.9994 0.1674 1.1419 35 1 3.8532 -1.3940 0.3001 36 1 5.8372 0.4545 2.5427 37 1 5.6993 -0.3780 4.1099 38 1 7.9947 -0.6942 2.1232 39 1 8.0527 0.2416 3.6365 40 1 9.9655 -1.6501 3.2694 41 1 9.1225 -4.4611 7.6579 42 1 12.4537 -4.3315 8.6259 43 1 11.9427 -6.6894 7.0108 44 1 9.4873 -6.4581 8.4672 45 1 11.0618 -6.3891 10.3210 46 1 12.9818 -3.7069 5.9825 47 1 7.5805 -4.0085 3.7667 48 1 7.7187 -3.1763 2.1997 49 1 5.4229 -2.8598 4.1862 50 1 5.3649 -3.7956 2.6729 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12222502_12175864.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:13 Heat of formation + Delta-G solvation = -44.558018 kcal Electronic energy + Delta-G solvation = -27131.490882 eV Core-core repulsion = 23352.590113 eV Total energy + Delta-G solvation = -3778.900769 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.204 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.08947 -40.46463 -38.77617 -38.06288 -37.10922 -35.41088 -34.65271 -32.55293 -31.90688 -30.64494 -28.99661 -28.12432 -26.45945 -25.79496 -24.34386 -23.64049 -23.44116 -22.56842 -21.27618 -20.78142 -19.33975 -18.71020 -18.14559 -17.77030 -16.89702 -16.76561 -16.56883 -16.19375 -16.04923 -15.74287 -15.67699 -15.55714 -15.10240 -14.91224 -14.68178 -14.55920 -14.20378 -13.99939 -13.82292 -13.62001 -13.30572 -13.20869 -13.13767 -12.87122 -12.66780 -12.48878 -12.23529 -12.21505 -12.09686 -11.99217 -11.82368 -11.75893 -11.69192 -11.57426 -11.52420 -11.33600 -11.17595 -10.71048 -10.34949 -9.99557 -9.08977 -5.02431 0.09041 0.19031 1.22604 1.53197 1.79518 1.92084 2.61709 2.84683 3.16391 3.31534 3.54573 3.62378 3.64102 3.72616 3.75338 3.86412 3.87024 3.96546 4.03381 4.08907 4.13956 4.21255 4.25041 4.28087 4.35992 4.38651 4.43849 4.49494 4.53984 4.60146 4.66824 4.70795 4.77003 4.79516 4.86366 4.88842 4.93236 4.96682 5.03268 5.05399 5.06987 5.12289 5.18786 5.24523 5.25772 5.35717 5.36748 5.41651 5.80577 6.03726 6.31710 6.34295 6.43026 7.32395 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.095 4.095 3 C -0.152 4.152 4 C -0.114 4.114 5 C 0.060 3.940 6 O -0.381 6.381 7 C 0.090 3.910 8 H 0.060 0.940 9 C -0.136 4.136 10 C -0.125 4.125 11 C 0.159 3.841 12 H 0.097 0.903 13 N -0.692 5.692 14 C 0.568 3.432 15 N -0.560 5.560 16 C 0.199 3.801 17 C -0.294 4.294 18 C -0.052 4.052 19 O -0.530 6.530 20 Si 0.677 3.323 21 C 0.223 3.777 22 N -0.570 5.570 23 C -0.125 4.125 24 C -0.112 4.112 25 H 0.056 0.944 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.070 0.930 29 H 0.055 0.945 30 H 0.056 0.944 31 H 0.057 0.943 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.050 0.950 35 H 0.046 0.954 36 H 0.069 0.931 37 H 0.076 0.924 38 H 0.069 0.931 39 H 0.075 0.925 40 H 0.414 0.586 41 H 0.166 0.834 42 H 0.120 0.880 43 H 0.376 0.624 44 H -0.257 1.257 45 H -0.253 1.253 46 H 0.170 0.830 47 H 0.074 0.926 48 H 0.063 0.937 49 H 0.076 0.924 50 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.603 2.077 -0.527 2.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.114 4.114 3 C -0.209 4.209 4 C -0.152 4.152 5 C -0.016 4.016 6 O -0.301 6.301 7 C 0.032 3.968 8 H 0.078 0.922 9 C -0.174 4.174 10 C -0.163 4.163 11 C 0.054 3.946 12 H 0.115 0.885 13 N -0.327 5.327 14 C 0.212 3.788 15 N -0.282 5.282 16 C 0.031 3.969 17 C -0.302 4.302 18 C -0.164 4.164 19 O -0.336 6.336 20 Si 0.578 3.422 21 C 0.055 3.945 22 N -0.292 5.292 23 C -0.164 4.164 24 C -0.150 4.150 25 H 0.075 0.925 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.089 0.911 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.069 0.931 35 H 0.065 0.935 36 H 0.088 0.912 37 H 0.095 0.905 38 H 0.088 0.912 39 H 0.093 0.907 40 H 0.251 0.749 41 H 0.183 0.817 42 H 0.138 0.862 43 H 0.223 0.777 44 H -0.182 1.182 45 H -0.178 1.178 46 H 0.187 0.813 47 H 0.092 0.908 48 H 0.082 0.918 49 H 0.095 0.905 50 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -2.257 2.188 -0.509 3.185 hybrid contribution 1.155 -0.958 -0.778 1.690 sum -1.103 1.230 -1.287 2.094 Atomic orbital electron populations 1.21830 0.94634 1.01990 1.02055 1.21060 0.96227 0.96338 0.97755 1.21933 1.00980 0.95903 1.02119 1.21587 0.93410 1.01587 0.98589 1.22637 0.95313 0.96087 0.87596 1.87918 1.21096 1.78435 1.42610 1.22131 0.81113 0.94817 0.98749 0.92223 1.21957 0.94092 0.98697 1.02644 1.21772 0.96413 0.97283 1.00877 1.21051 0.77969 0.94334 1.01238 0.88549 1.44284 1.07193 1.55138 1.26122 1.19403 0.85079 0.87382 0.86933 1.67944 1.39822 1.15360 1.05110 1.22795 0.91991 0.89393 0.92682 1.21646 0.96088 1.09228 1.03247 1.24670 1.04229 0.89633 0.97848 1.86608 1.37893 1.37334 1.71789 0.95241 0.78676 0.87860 0.80418 1.22827 1.00561 0.85429 0.85704 1.67994 1.10097 1.22865 1.28208 1.21907 0.94562 0.98907 1.01056 1.21518 0.95048 0.96734 1.01688 0.92480 0.92450 0.92523 0.91117 0.92638 0.92515 0.92429 0.91080 0.91008 0.93137 0.93536 0.91185 0.90484 0.91214 0.90656 0.74909 0.81699 0.86215 0.77662 1.18217 1.17769 0.81305 0.90770 0.91795 0.90532 0.90933 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 9.19 37.16 0.34 0.47 16 2 C -0.10 0.08 2.92 -90.62 -0.26 -0.19 16 3 C -0.15 0.16 8.95 37.16 0.33 0.49 16 4 C -0.11 0.01 5.05 -26.74 -0.14 -0.12 16 5 C 0.06 0.00 5.50 37.16 0.20 0.21 16 6 O -0.38 -0.62 9.99 -35.23 -0.35 -0.97 16 7 C 0.09 -0.02 2.61 -26.73 -0.07 -0.09 16 8 H 0.06 -0.04 7.79 -51.93 -0.40 -0.45 16 9 C -0.14 0.15 5.54 -26.73 -0.15 0.00 16 10 C -0.13 0.23 5.39 -26.73 -0.14 0.09 16 11 C 0.16 -0.09 2.45 -67.93 -0.17 -0.26 16 12 H 0.10 0.07 7.50 -51.93 -0.39 -0.32 16 13 N -0.69 -0.27 5.22 -55.79 -0.29 -0.56 16 14 C 0.57 1.36 8.40 -322.81 -2.71 -1.35 16 15 N -0.56 -1.18 9.20 -13.93 -0.13 -1.31 16 16 C 0.20 0.06 9.92 -17.22 -0.17 -0.11 16 17 C -0.29 0.03 5.40 -104.35 -0.56 -0.53 16 18 C -0.05 0.06 2.85 36.00 0.10 0.17 16 19 O -0.53 -0.15 12.79 -35.23 -0.45 -0.60 16 20 Si 0.68 -1.20 29.87 -169.99 -5.08 -6.28 16 21 C 0.22 0.23 10.92 -17.23 -0.19 0.04 16 22 N -0.57 -1.55 10.46 -13.93 -0.15 -1.70 16 23 C -0.13 0.05 5.51 -26.73 -0.15 -0.10 16 24 C -0.11 0.02 5.57 -26.73 -0.15 -0.13 16 25 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.06 -0.06 8.14 -51.92 -0.42 -0.48 16 27 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.05 -0.07 6.57 -51.93 -0.34 -0.41 16 30 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.05 -0.03 6.30 -51.93 -0.33 -0.36 16 35 H 0.05 -0.02 8.08 -51.93 -0.42 -0.44 16 36 H 0.07 -0.09 7.87 -51.93 -0.41 -0.50 16 37 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.41 -0.29 8.72 -40.82 -0.36 -0.64 16 41 H 0.17 -0.35 5.04 -52.49 -0.26 -0.61 16 42 H 0.12 -0.25 7.96 -51.92 -0.41 -0.66 16 43 H 0.38 -0.84 8.70 45.56 0.40 -0.45 16 44 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 45 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 46 H 0.17 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 48 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 49 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 50 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 392.63 15.07 5.92 5.92 Total: 0.00 -5.49 392.63 -13.30 -18.79 By element: Atomic # 1 Polarization: -3.00 SS G_CDS: -8.89 Total: -11.89 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: -3.88 Total: -1.41 kcal Atomic # 7 Polarization: -3.00 SS G_CDS: -0.57 Total: -3.56 kcal Atomic # 8 Polarization: -0.77 SS G_CDS: -0.80 Total: -1.57 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -5.49 -13.30 -18.79 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12222502_12175864.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.770 kcal (2) G-P(sol) polarization free energy of solvation -5.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.262 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.296 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.788 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds