Wall clock time and date at job start Tue Mar 9 2021 13:19:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86311 * 109.47152 * 2 1 4 4 C 1.50696 * 109.47173 * 240.00545 * 2 1 3 5 5 C 1.38612 * 120.72038 * 299.99451 * 4 2 1 6 6 N 1.32273 * 119.19810 * 180.02562 * 5 4 2 7 7 C 1.32492 * 120.74274 * 0.02562 * 6 5 4 8 8 N 1.38409 * 119.21698 * 179.97438 * 7 6 5 9 9 C 1.46498 * 119.99772 * 180.27705 * 8 7 6 10 10 H 1.09004 * 109.47372 * 34.71849 * 9 8 7 11 11 C 1.52999 * 109.46963 * 154.72287 * 9 8 7 12 12 C 1.53003 * 109.47087 * 179.97438 * 11 9 8 13 13 C 1.52997 * 109.47241 * 300.00042 * 12 11 9 14 14 H 1.08995 * 109.47096 * 299.99819 * 13 12 11 15 15 C 1.53003 * 109.47241 * 179.97438 * 13 12 11 16 16 F 1.39897 * 109.47135 * 60.00068 * 15 13 12 17 17 F 1.39902 * 109.47147 * 180.02562 * 15 13 12 18 18 F 1.39898 * 109.46694 * 299.99676 * 15 13 12 19 19 C 1.52999 * 109.47114 * 59.99975 * 13 12 11 20 20 C 1.52997 * 109.47036 * 274.72128 * 9 8 7 21 21 N 1.32489 * 121.56429 * 0.27365 * 7 6 5 22 22 C 1.32282 * 120.74091 * 359.43918 * 21 7 6 23 23 H 0.96699 * 114.00627 * 59.99634 * 1 2 3 24 24 H 1.08997 * 109.47574 * 120.00083 * 2 1 3 25 25 H 1.48494 * 109.99654 * 298.68709 * 3 2 1 26 26 H 1.48502 * 109.99432 * 60.00049 * 3 2 1 27 27 H 1.07997 * 120.39562 * 0.02562 * 5 4 2 28 28 H 0.97001 * 119.99783 * 359.97438 * 8 7 6 29 29 H 1.08997 * 109.46923 * 299.99333 * 11 9 8 30 30 H 1.08995 * 109.47266 * 59.99845 * 11 9 8 31 31 H 1.09004 * 109.47044 * 59.99688 * 12 11 9 32 32 H 1.08997 * 109.47066 * 179.97438 * 12 11 9 33 33 H 1.08995 * 109.47266 * 59.99948 * 19 13 12 34 34 H 1.09000 * 109.47204 * 180.02562 * 19 13 12 35 35 H 1.09009 * 109.47238 * 300.00198 * 20 9 8 36 36 H 1.08997 * 109.47293 * 60.00168 * 20 9 8 37 37 H 1.08001 * 120.40197 * 180.24949 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.6057 -2.0371 -1.4647 6 7 2.0634 -2.6312 -2.5543 7 6 2.8248 -1.9726 -3.4157 8 7 3.2870 -2.6254 -4.5453 9 6 4.1351 -1.9154 -5.5060 10 1 4.7784 -1.2143 -4.9741 11 6 4.9986 -2.9238 -6.2665 12 6 5.8839 -2.1824 -7.2703 13 6 5.0027 -1.4170 -8.2595 14 1 4.3595 -2.1183 -8.7910 15 6 5.8880 -0.6751 -9.2630 16 9 6.6780 -1.5967 -9.9585 17 9 5.0823 0.0252 -10.1671 18 9 6.7132 0.2250 -8.5803 19 6 4.1392 -0.4086 -7.4990 20 6 3.2544 -1.1497 -6.4952 21 7 3.1591 -0.7059 -3.2184 22 6 2.7301 -0.0515 -2.1519 23 1 -0.3934 0.4417 -0.7650 24 1 1.7923 -0.5138 0.8899 25 1 1.5877 2.4586 -1.2241 26 1 1.5614 2.4679 1.2086 27 1 0.9857 -2.5792 -0.7660 28 1 3.0530 -3.5542 -4.6986 29 1 5.6261 -3.4692 -5.5617 30 1 4.3554 -3.6248 -6.7983 31 1 6.5272 -1.4810 -6.7388 32 1 6.4994 -2.9007 -7.8118 33 1 4.7825 0.2926 -6.9675 34 1 3.5112 0.1363 -8.2037 35 1 2.6110 -1.8507 -7.0271 36 1 2.6392 -0.4313 -5.9534 37 1 3.0027 0.9822 -1.9986 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12301706_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:31 Heat of formation + Delta-G solvation = -136.172116 kcal Electronic energy + Delta-G solvation = -25176.209739 eV Core-core repulsion = 20925.807026 eV Total energy + Delta-G solvation = -4250.402713 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.114 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -51.06735 -48.54874 -48.52650 -42.14041 -40.16694 -38.21608 -36.40546 -34.72280 -33.09489 -32.11612 -30.98605 -27.13437 -26.11000 -25.59148 -24.10362 -23.38367 -22.59033 -21.38996 -19.56695 -19.22872 -19.13415 -18.76788 -18.62649 -18.17467 -16.78218 -16.62264 -16.19022 -15.95985 -15.79278 -15.65734 -15.55275 -15.22559 -15.11776 -14.93030 -14.71352 -14.69436 -14.62812 -14.55048 -14.03293 -13.95918 -13.59258 -13.48335 -13.17992 -12.70271 -12.43020 -12.28650 -12.09607 -12.04504 -11.87807 -11.75253 -11.55577 -11.21812 -10.74607 -10.04406 -9.15530 -5.05302 0.04253 0.14145 1.19567 1.50223 1.66053 1.81739 1.89675 2.76314 2.79614 2.90136 2.97910 3.11175 3.28233 3.45005 3.54663 3.58602 3.67343 3.69454 3.78531 3.92564 3.95641 4.06036 4.12000 4.18918 4.19368 4.43036 4.51282 4.51829 4.71722 4.73545 4.75756 4.84212 4.89045 5.00316 5.08415 5.25518 5.74373 5.97767 6.31491 6.36783 7.26888 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.677 3.323 4 C -0.292 4.292 5 C 0.223 3.777 6 N -0.569 5.569 7 C 0.568 3.432 8 N -0.692 5.692 9 C 0.158 3.842 10 H 0.098 0.902 11 C -0.124 4.124 12 C -0.114 4.114 13 C -0.134 4.134 14 H 0.116 0.884 15 C 0.453 3.547 16 F -0.183 7.183 17 F -0.183 7.183 18 F -0.181 7.181 19 C -0.116 4.116 20 C -0.124 4.124 21 N -0.561 5.561 22 C 0.199 3.801 23 H 0.376 0.624 24 H 0.120 0.880 25 H -0.257 1.257 26 H -0.253 1.253 27 H 0.170 0.830 28 H 0.414 0.586 29 H 0.081 0.919 30 H 0.074 0.926 31 H 0.082 0.918 32 H 0.084 0.916 33 H 0.082 0.918 34 H 0.080 0.920 35 H 0.068 0.932 36 H 0.077 0.923 37 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.054 -0.720 1.077 1.670 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.578 3.422 4 C -0.301 4.301 5 C 0.055 3.945 6 N -0.291 5.291 7 C 0.212 3.788 8 N -0.328 5.328 9 C 0.052 3.948 10 H 0.116 0.884 11 C -0.162 4.162 12 C -0.152 4.152 13 C -0.154 4.154 14 H 0.134 0.866 15 C 0.399 3.601 16 F -0.165 7.165 17 F -0.165 7.165 18 F -0.163 7.163 19 C -0.154 4.154 20 C -0.163 4.163 21 N -0.283 5.283 22 C 0.031 3.969 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.182 1.182 26 H -0.177 1.177 27 H 0.187 0.813 28 H 0.252 0.748 29 H 0.099 0.901 30 H 0.093 0.907 31 H 0.101 0.899 32 H 0.103 0.897 33 H 0.100 0.900 34 H 0.099 0.901 35 H 0.086 0.914 36 H 0.095 0.905 37 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.426 -0.571 0.626 1.659 hybrid contribution -1.379 0.007 -0.116 1.384 sum 0.047 -0.564 0.510 0.762 Atomic orbital electron populations 1.86609 1.17764 1.79841 1.49375 1.24670 0.83756 1.10498 0.97472 0.95258 0.91529 0.74583 0.80840 1.21660 1.08130 0.98338 1.01932 1.22838 0.90227 0.90587 0.90843 1.67990 1.16044 1.39370 1.05677 1.19392 0.86831 0.85705 0.86915 1.44229 1.54020 1.14613 1.19906 1.21048 0.91044 0.94008 0.88660 0.88424 1.21762 0.98442 0.97871 0.98102 1.21547 0.97460 0.99917 0.96305 1.22573 0.97501 0.99221 0.96065 0.86585 1.20604 0.79888 0.78029 0.81568 1.93192 1.76156 1.66108 1.81027 1.93195 1.73053 1.80365 1.69852 1.93184 1.74150 1.69502 1.79436 1.21567 0.98402 0.97046 0.98348 1.21890 0.98107 0.99813 0.96530 1.67932 1.28230 1.08440 1.23680 1.22797 0.88510 0.98867 0.86686 0.77648 0.86189 1.18224 1.17743 0.81272 0.74813 0.90069 0.90713 0.89911 0.89717 0.89958 0.90090 0.91376 0.90472 0.81671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.07 12.79 -35.23 -0.45 -0.38 16 2 C -0.05 0.09 2.85 36.00 0.10 0.19 16 3 Si 0.68 -1.47 29.87 -169.99 -5.08 -6.55 16 4 C -0.29 0.20 5.40 -104.35 -0.56 -0.36 16 5 C 0.22 0.10 10.92 -17.22 -0.19 -0.09 16 6 N -0.57 -1.16 10.46 -13.93 -0.15 -1.30 16 7 C 0.57 0.86 8.41 -322.81 -2.71 -1.85 16 8 N -0.69 0.52 5.22 -55.80 -0.29 0.23 16 9 C 0.16 -0.32 2.45 -67.93 -0.17 -0.49 16 10 H 0.10 -0.08 7.49 -51.93 -0.39 -0.47 16 11 C -0.12 0.44 5.39 -26.73 -0.14 0.30 16 12 C -0.11 0.35 4.96 -26.73 -0.13 0.22 16 13 C -0.13 0.33 2.17 -90.62 -0.20 0.13 16 14 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 15 C 0.45 0.02 2.69 37.16 0.10 0.12 16 16 F -0.18 -0.21 16.80 2.25 0.04 -0.17 16 17 F -0.18 -0.25 16.80 2.25 0.04 -0.21 16 18 F -0.18 -0.19 16.27 2.25 0.04 -0.16 16 19 C -0.12 0.26 4.96 -26.75 -0.13 0.13 16 20 C -0.12 0.25 5.51 -26.75 -0.15 0.11 16 21 N -0.56 -0.69 9.20 -13.93 -0.13 -0.82 16 22 C 0.20 -0.08 9.92 -17.22 -0.17 -0.25 16 23 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 24 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 25 H -0.26 0.06 7.11 56.52 0.40 0.46 16 26 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 27 H 0.17 -0.19 8.06 -52.49 -0.42 -0.62 16 28 H 0.41 -0.74 8.72 -40.82 -0.36 -1.09 16 29 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.07 -0.31 8.14 -51.93 -0.42 -0.74 16 31 H 0.08 -0.23 7.80 -51.93 -0.41 -0.63 16 32 H 0.08 -0.27 7.80 -51.93 -0.41 -0.68 16 33 H 0.08 -0.16 7.80 -51.93 -0.41 -0.56 16 34 H 0.08 -0.17 7.80 -51.93 -0.41 -0.57 16 35 H 0.07 -0.15 8.14 -51.92 -0.42 -0.57 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.17 -0.45 5.04 -52.49 -0.26 -0.72 16 LS Contribution 315.12 15.07 4.75 4.75 Total: 0.00 -5.91 315.12 -9.97 -15.88 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -4.38 Total: -9.43 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -4.35 Total: -1.84 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -0.57 Total: -1.89 kcal Atomic # 8 Polarization: 0.07 SS G_CDS: -0.45 Total: -0.38 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.11 Total: -0.54 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.08 Total: -6.55 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -5.91 -9.97 -15.88 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12301706_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.295 kcal (2) G-P(sol) polarization free energy of solvation -5.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.206 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.877 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds