Wall clock time and date at job start Tue Mar 9 2021 13:19:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86311 * 109.47152 * 2 1 4 4 C 1.50696 * 109.47173 * 240.00545 * 2 1 3 5 5 C 1.38612 * 120.72038 * 299.99451 * 4 2 1 6 6 N 1.32273 * 119.19810 * 180.02562 * 5 4 2 7 7 C 1.32492 * 120.74274 * 0.02562 * 6 5 4 8 8 N 1.38409 * 119.21698 * 179.97438 * 7 6 5 9 9 C 1.46498 * 119.99772 * 180.27705 * 8 7 6 10 10 H 1.09004 * 109.47372 * 34.71849 * 9 8 7 11 11 C 1.52999 * 109.46963 * 154.72287 * 9 8 7 12 12 C 1.53003 * 109.47087 * 179.97438 * 11 9 8 13 13 C 1.52997 * 109.47241 * 300.00042 * 12 11 9 14 14 H 1.08995 * 109.47096 * 299.99819 * 13 12 11 15 15 C 1.53003 * 109.47241 * 179.97438 * 13 12 11 16 16 F 1.39897 * 109.47135 * 60.00068 * 15 13 12 17 17 F 1.39902 * 109.47147 * 180.02562 * 15 13 12 18 18 F 1.39898 * 109.46694 * 299.99676 * 15 13 12 19 19 C 1.52999 * 109.47114 * 59.99975 * 13 12 11 20 20 C 1.52997 * 109.47036 * 274.72128 * 9 8 7 21 21 N 1.32489 * 121.56429 * 0.27365 * 7 6 5 22 22 C 1.32282 * 120.74091 * 359.43918 * 21 7 6 23 23 H 0.96699 * 114.00627 * 59.99634 * 1 2 3 24 24 H 1.08997 * 109.47574 * 120.00083 * 2 1 3 25 25 H 1.48494 * 109.99654 * 298.68709 * 3 2 1 26 26 H 1.48502 * 109.99432 * 60.00049 * 3 2 1 27 27 H 1.07997 * 120.39562 * 0.02562 * 5 4 2 28 28 H 0.97001 * 119.99783 * 359.97438 * 8 7 6 29 29 H 1.08997 * 109.46923 * 299.99333 * 11 9 8 30 30 H 1.08995 * 109.47266 * 59.99845 * 11 9 8 31 31 H 1.09004 * 109.47044 * 59.99688 * 12 11 9 32 32 H 1.08997 * 109.47066 * 179.97438 * 12 11 9 33 33 H 1.08995 * 109.47266 * 59.99948 * 19 13 12 34 34 H 1.09000 * 109.47204 * 180.02562 * 19 13 12 35 35 H 1.09009 * 109.47238 * 300.00198 * 20 9 8 36 36 H 1.08997 * 109.47293 * 60.00168 * 20 9 8 37 37 H 1.08001 * 120.40197 * 180.24949 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.6057 -2.0371 -1.4647 6 7 2.0634 -2.6312 -2.5543 7 6 2.8248 -1.9726 -3.4157 8 7 3.2870 -2.6254 -4.5453 9 6 4.1351 -1.9154 -5.5060 10 1 4.7784 -1.2143 -4.9741 11 6 4.9986 -2.9238 -6.2665 12 6 5.8839 -2.1824 -7.2703 13 6 5.0027 -1.4170 -8.2595 14 1 4.3595 -2.1183 -8.7910 15 6 5.8880 -0.6751 -9.2630 16 9 6.6780 -1.5967 -9.9585 17 9 5.0823 0.0252 -10.1671 18 9 6.7132 0.2250 -8.5803 19 6 4.1392 -0.4086 -7.4990 20 6 3.2544 -1.1497 -6.4952 21 7 3.1591 -0.7059 -3.2184 22 6 2.7301 -0.0515 -2.1519 23 1 -0.3934 0.4417 -0.7650 24 1 1.7923 -0.5138 0.8899 25 1 1.5877 2.4586 -1.2241 26 1 1.5614 2.4679 1.2086 27 1 0.9857 -2.5792 -0.7660 28 1 3.0530 -3.5542 -4.6986 29 1 5.6261 -3.4692 -5.5617 30 1 4.3554 -3.6248 -6.7983 31 1 6.5272 -1.4810 -6.7388 32 1 6.4994 -2.9007 -7.8118 33 1 4.7825 0.2926 -6.9675 34 1 3.5112 0.1363 -8.2037 35 1 2.6110 -1.8507 -7.0271 36 1 2.6392 -0.4313 -5.9534 37 1 3.0027 0.9822 -1.9986 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_12301706_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:30 Heat of formation + Delta-G solvation = -130.976435 kcal Electronic energy + Delta-G solvation = -25175.984437 eV Core-core repulsion = 20925.807026 eV Total energy + Delta-G solvation = -4250.177411 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.114 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -51.10862 -48.60478 -48.57957 -42.11811 -40.01490 -38.15204 -36.31520 -34.72840 -33.02388 -31.92174 -30.89751 -27.07520 -26.06054 -25.55679 -23.92217 -23.32100 -22.50347 -21.23296 -19.55081 -19.25860 -19.11962 -18.72227 -18.57320 -18.12401 -16.67724 -16.56661 -16.13670 -15.86065 -15.73922 -15.63108 -15.55487 -15.15290 -15.06347 -14.95116 -14.75377 -14.75000 -14.56902 -14.46848 -14.03003 -13.81053 -13.47981 -13.29030 -13.14239 -12.53103 -12.30284 -12.21062 -11.99318 -11.91183 -11.88198 -11.70922 -11.40103 -11.09759 -10.68572 -10.04411 -9.09874 -4.91187 0.06353 0.14874 1.32298 1.60709 1.72732 1.87350 1.98629 2.79989 2.81567 2.97299 3.04996 3.17453 3.42474 3.60258 3.66431 3.67918 3.72231 3.78506 3.93137 4.11004 4.12647 4.24038 4.25875 4.31064 4.40314 4.58952 4.65870 4.71864 4.80110 4.88644 4.98921 5.06282 5.07319 5.16795 5.22992 5.37579 5.78604 6.05828 6.41997 6.49379 7.28792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.055 4.055 3 Si 0.757 3.243 4 C -0.285 4.285 5 C 0.213 3.787 6 N -0.590 5.590 7 C 0.553 3.447 8 N -0.687 5.687 9 C 0.160 3.840 10 H 0.085 0.915 11 C -0.115 4.115 12 C -0.112 4.112 13 C -0.126 4.126 14 H 0.131 0.869 15 C 0.449 3.551 16 F -0.190 7.190 17 F -0.193 7.193 18 F -0.189 7.189 19 C -0.111 4.111 20 C -0.116 4.116 21 N -0.574 5.574 22 C 0.193 3.807 23 H 0.385 0.615 24 H 0.131 0.869 25 H -0.281 1.281 26 H -0.300 1.300 27 H 0.181 0.819 28 H 0.418 0.582 29 H 0.084 0.916 30 H 0.087 0.913 31 H 0.078 0.922 32 H 0.090 0.910 33 H 0.077 0.923 34 H 0.079 0.921 35 H 0.074 0.926 36 H 0.060 0.940 37 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.203 -1.198 1.049 1.995 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.166 4.166 3 Si 0.662 3.338 4 C -0.293 4.293 5 C 0.045 3.955 6 N -0.313 5.313 7 C 0.196 3.804 8 N -0.323 5.323 9 C 0.055 3.945 10 H 0.103 0.897 11 C -0.153 4.153 12 C -0.150 4.150 13 C -0.145 4.145 14 H 0.149 0.851 15 C 0.395 3.605 16 F -0.172 7.172 17 F -0.174 7.174 18 F -0.171 7.171 19 C -0.149 4.149 20 C -0.155 4.155 21 N -0.297 5.297 22 C 0.026 3.974 23 H 0.234 0.766 24 H 0.149 0.851 25 H -0.207 1.207 26 H -0.228 1.228 27 H 0.198 0.802 28 H 0.257 0.743 29 H 0.103 0.897 30 H 0.106 0.894 31 H 0.097 0.903 32 H 0.108 0.892 33 H 0.095 0.905 34 H 0.098 0.902 35 H 0.092 0.908 36 H 0.078 0.922 37 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 1.584 -1.070 0.581 1.998 hybrid contribution -1.450 0.207 -0.090 1.467 sum 0.134 -0.864 0.491 1.002 Atomic orbital electron populations 1.86584 1.18520 1.80200 1.50160 1.24836 0.83195 1.11037 0.97509 0.94330 0.90253 0.72311 0.76861 1.21681 1.07701 0.97918 1.02022 1.23117 0.90345 0.91238 0.90782 1.68003 1.16828 1.40029 1.06413 1.19658 0.87149 0.86050 0.87502 1.44303 1.53742 1.14786 1.19463 1.21052 0.90835 0.94208 0.88365 0.89660 1.21696 0.98243 0.97468 0.97867 1.21543 0.97397 0.99881 0.96162 1.22591 0.97218 0.99072 0.95621 0.85062 1.20997 0.79910 0.77873 0.81728 1.93175 1.76451 1.66247 1.81293 1.93173 1.73234 1.80664 1.70334 1.93165 1.74504 1.69899 1.79521 1.21512 0.98250 0.97009 0.98174 1.21788 0.97928 0.99468 0.96333 1.67977 1.28775 1.08523 1.24383 1.23172 0.88255 0.99663 0.86311 0.76564 0.85098 1.20733 1.22807 0.80208 0.74321 0.89744 0.89448 0.90349 0.89170 0.90476 0.90237 0.90762 0.92160 0.79766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.24 12.79 -148.98 -1.90 -1.67 16 2 C -0.06 0.20 2.85 71.23 0.20 0.41 16 3 Si 0.76 -3.37 29.87 68.60 2.05 -1.32 16 4 C -0.28 0.43 5.40 -19.69 -0.11 0.32 16 5 C 0.21 0.23 10.92 84.72 0.93 1.16 16 6 N -0.59 -2.65 10.46 -197.99 -2.07 -4.72 16 7 C 0.55 1.91 8.41 261.49 2.20 4.11 16 8 N -0.69 0.93 5.22 -330.44 -1.73 -0.80 16 9 C 0.16 -0.65 2.45 44.99 0.11 -0.54 16 10 H 0.09 -0.11 7.49 -2.39 -0.02 -0.12 16 11 C -0.11 0.91 5.39 30.59 0.16 1.07 16 12 C -0.11 0.76 4.96 30.59 0.15 0.91 16 13 C -0.13 0.66 2.17 -10.79 -0.02 0.64 16 14 H 0.13 -1.06 8.14 -2.39 -0.02 -1.08 16 15 C 0.45 0.09 2.69 71.98 0.19 0.28 16 16 F -0.19 -0.43 16.80 44.97 0.76 0.33 16 17 F -0.19 -0.58 16.80 44.97 0.76 0.17 16 18 F -0.19 -0.49 16.27 44.97 0.73 0.24 16 19 C -0.11 0.50 4.96 30.58 0.15 0.65 16 20 C -0.12 0.46 5.51 30.58 0.17 0.63 16 21 N -0.57 -1.63 9.20 -197.98 -1.82 -3.45 16 22 C 0.19 -0.16 9.92 84.71 0.84 0.68 16 23 H 0.39 -2.07 8.70 -74.06 -0.64 -2.71 16 24 H 0.13 -0.76 7.96 -2.39 -0.02 -0.78 16 25 H -0.28 0.16 7.11 99.48 0.71 0.87 16 26 H -0.30 -1.10 7.11 99.48 0.71 -0.39 16 27 H 0.18 -0.40 8.06 -2.91 -0.02 -0.42 16 28 H 0.42 -1.51 8.72 -92.71 -0.81 -2.32 16 29 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 30 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 31 H 0.08 -0.43 7.80 -2.39 -0.02 -0.45 16 32 H 0.09 -0.66 7.80 -2.39 -0.02 -0.68 16 33 H 0.08 -0.25 7.80 -2.39 -0.02 -0.27 16 34 H 0.08 -0.31 7.80 -2.39 -0.02 -0.33 16 35 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 36 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 37 H 0.19 -1.10 5.04 -2.91 -0.01 -1.11 16 Total: 0.00 -14.14 315.12 1.46 -12.68 By element: Atomic # 1 Polarization: -11.49 SS G_CDS: -0.29 Total: -11.78 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: 4.98 Total: 10.31 kcal Atomic # 7 Polarization: -3.35 SS G_CDS: -5.62 Total: -8.96 kcal Atomic # 8 Polarization: 0.24 SS G_CDS: -1.90 Total: -1.67 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 2.24 Total: 0.74 kcal Atomic # 14 Polarization: -3.37 SS G_CDS: 2.05 Total: -1.32 kcal Total: -14.14 1.46 -12.68 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12301706_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.297 kcal (2) G-P(sol) polarization free energy of solvation -14.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.680 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds