Wall clock time and date at job start Tue Mar 9 2021 13:19:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47203 * 2 1 4 4 C 1.50697 * 109.47390 * 120.00444 * 2 1 3 5 5 C 1.38840 * 120.33884 * 64.99428 * 4 2 1 6 6 C 1.38334 * 118.50792 * 179.97438 * 5 4 2 7 7 C 1.39095 * 119.09969 * 0.02562 * 6 5 4 8 8 N 1.39008 * 119.70868 * 179.72112 * 7 6 5 9 9 C 1.46505 * 119.99578 * 0.02562 * 8 7 6 10 10 H 1.08997 * 109.46976 * 35.00083 * 9 8 7 11 11 C 1.53001 * 109.46960 * 155.00130 * 9 8 7 12 12 C 1.52996 * 109.47013 * 180.02562 * 11 9 8 13 13 C 1.52997 * 109.47109 * 299.99883 * 12 11 9 14 14 H 1.09005 * 109.46920 * 299.99881 * 13 12 11 15 15 C 1.52999 * 109.47068 * 180.02562 * 13 12 11 16 16 F 1.39895 * 109.47408 * 59.99545 * 15 13 12 17 17 F 1.39902 * 109.47056 * 179.97438 * 15 13 12 18 18 F 1.39898 * 109.46831 * 299.99604 * 15 13 12 19 19 C 1.52989 * 109.47261 * 60.00013 * 13 12 11 20 20 C 1.52997 * 109.47187 * 275.00028 * 9 8 7 21 21 N 1.32431 * 120.58957 * 0.02562 * 7 6 5 22 22 C 1.31940 * 121.61846 * 0.02562 * 21 7 6 23 23 H 0.96701 * 113.99804 * 299.99674 * 1 2 3 24 24 H 1.09003 * 109.46814 * 240.00478 * 2 1 3 25 25 H 1.48504 * 110.00103 * 300.00216 * 3 2 1 26 26 H 1.48504 * 109.99807 * 61.31936 * 3 2 1 27 27 H 1.07998 * 120.74583 * 0.02562 * 5 4 2 28 28 H 1.07999 * 120.45408 * 179.97438 * 6 5 4 29 29 H 0.96998 * 120.00522 * 180.02562 * 8 7 6 30 30 H 1.09002 * 109.46667 * 300.00304 * 11 9 8 31 31 H 1.09004 * 109.47087 * 59.99526 * 11 9 8 32 32 H 1.08996 * 109.47499 * 60.00069 * 12 11 9 33 33 H 1.09010 * 109.46861 * 179.97438 * 12 11 9 34 34 H 1.09005 * 109.47261 * 60.00077 * 19 13 12 35 35 H 1.09000 * 109.47291 * 179.97438 * 19 13 12 36 36 H 1.09005 * 109.46920 * 299.99899 * 20 9 8 37 37 H 1.08997 * 109.47491 * 60.00060 * 20 9 8 38 38 H 1.08003 * 119.56595 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6876 -2.0660 1.4061 6 6 2.1666 -2.6801 2.5493 7 6 2.8718 -1.9231 3.4791 8 7 3.3538 -2.5262 4.6351 9 6 3.1187 -3.9531 4.8695 10 1 3.1495 -4.4872 3.9199 11 6 4.2027 -4.5025 5.7990 12 6 3.9576 -5.9929 6.0434 13 6 2.5850 -6.1844 6.6915 14 1 2.5540 -5.6505 7.6413 15 6 2.3401 -7.6747 6.9364 16 9 3.3314 -8.1767 7.7864 17 9 1.0853 -7.8498 7.5295 18 9 2.3801 -8.3602 5.7175 19 6 1.5011 -5.6349 5.7621 20 6 1.7462 -4.1441 5.5179 21 7 3.0829 -0.6317 3.2757 22 6 2.6370 -0.0196 2.1953 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8901 25 1 1.5615 2.4679 -1.2085 26 1 1.5879 2.4585 1.2243 27 1 1.1371 -2.6284 0.6665 28 1 1.9947 -3.7329 2.7182 29 1 3.8458 -2.0022 5.2865 30 1 5.1806 -4.3664 5.3371 31 1 4.1721 -3.9683 6.7487 32 1 3.9886 -6.5267 5.0936 33 1 4.7302 -6.3844 6.7052 34 1 1.5320 -6.1688 4.8122 35 1 0.5231 -5.7718 6.2236 36 1 1.7155 -3.6099 6.4676 37 1 0.9739 -3.7526 4.8558 38 1 2.8278 1.0352 2.0632 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12301706_13915762.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:34 Heat of formation + Delta-G solvation = -153.091042 kcal Electronic energy + Delta-G solvation = -25009.307819 eV Core-core repulsion = 20823.597358 eV Total energy + Delta-G solvation = -4185.710462 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.119 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -51.11703 -48.59309 -48.58109 -41.55566 -40.13898 -38.04600 -36.29889 -33.55176 -32.51874 -32.11419 -30.60312 -26.98774 -25.73852 -24.95531 -24.03380 -23.21798 -22.23595 -21.39348 -19.40548 -19.26920 -18.74470 -18.68123 -18.53576 -17.74479 -16.52654 -16.45864 -16.29167 -15.85742 -15.81684 -15.54247 -15.46606 -15.07853 -14.95869 -14.89161 -14.76595 -14.74215 -14.64138 -14.31819 -14.07163 -13.91823 -13.67918 -13.55449 -13.27824 -12.78796 -12.51658 -12.44004 -12.12970 -12.01462 -11.95171 -11.67201 -11.13457 -10.77037 -10.54021 -10.37689 -8.76448 -4.95997 0.22488 0.40626 1.29625 1.58604 1.67087 1.95843 1.98310 2.71939 2.81560 2.84764 2.91843 3.34188 3.39740 3.46798 3.58160 3.67916 3.75668 3.79419 3.85779 3.94150 3.96757 3.98662 4.07029 4.10950 4.28311 4.40759 4.42898 4.53991 4.58806 4.70136 4.72823 4.76137 4.79837 4.89657 4.97572 5.03222 5.29094 5.48536 5.94507 6.41287 6.47712 7.13295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.679 3.321 4 C -0.233 4.233 5 C -0.005 4.005 6 C -0.240 4.240 7 C 0.409 3.591 8 N -0.719 5.719 9 C 0.152 3.848 10 H 0.087 0.913 11 C -0.122 4.122 12 C -0.116 4.116 13 C -0.134 4.134 14 H 0.117 0.883 15 C 0.453 3.547 16 F -0.183 7.183 17 F -0.183 7.183 18 F -0.182 7.182 19 C -0.118 4.118 20 C -0.132 4.132 21 N -0.539 5.539 22 C 0.155 3.845 23 H 0.375 0.625 24 H 0.116 0.884 25 H -0.256 1.256 26 H -0.258 1.258 27 H 0.135 0.865 28 H 0.134 0.866 29 H 0.406 0.594 30 H 0.082 0.918 31 H 0.076 0.924 32 H 0.081 0.919 33 H 0.085 0.915 34 H 0.080 0.920 35 H 0.082 0.918 36 H 0.073 0.927 37 H 0.076 0.924 38 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.341 0.290 0.482 2.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.581 3.419 4 C -0.238 4.238 5 C -0.031 4.031 6 C -0.265 4.265 7 C 0.174 3.826 8 N -0.351 5.351 9 C 0.046 3.954 10 H 0.105 0.895 11 C -0.160 4.160 12 C -0.154 4.154 13 C -0.154 4.154 14 H 0.135 0.865 15 C 0.399 3.601 16 F -0.164 7.164 17 F -0.164 7.164 18 F -0.163 7.163 19 C -0.156 4.156 20 C -0.171 4.171 21 N -0.256 5.256 22 C -0.003 4.003 23 H 0.223 0.777 24 H 0.134 0.866 25 H -0.181 1.181 26 H -0.183 1.183 27 H 0.153 0.847 28 H 0.151 0.849 29 H 0.242 0.758 30 H 0.101 0.899 31 H 0.094 0.906 32 H 0.100 0.900 33 H 0.104 0.896 34 H 0.099 0.901 35 H 0.101 0.899 36 H 0.092 0.908 37 H 0.095 0.905 38 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 2.644 1.048 0.575 2.902 hybrid contribution -1.432 -0.784 0.342 1.668 sum 1.212 0.264 0.917 1.543 Atomic orbital electron populations 1.86598 1.17973 1.79927 1.49304 1.24756 0.83681 1.10580 0.97990 0.95109 0.91680 0.74721 0.80400 1.20923 1.06974 0.95986 0.99948 1.21204 0.93063 0.93435 0.95358 1.21489 1.06769 1.01339 0.96892 1.18388 0.89148 0.88448 0.86650 1.44547 1.60739 1.09122 1.20660 1.21071 0.94496 0.80480 0.99358 0.89521 1.21728 0.99015 0.94964 1.00256 1.21567 0.94389 0.97147 1.02261 1.22567 0.99508 0.89218 1.04069 0.86485 1.20599 0.73963 0.91527 0.74012 1.93195 1.62005 1.89584 1.71648 1.93198 1.42492 1.96430 1.84308 1.93183 1.96118 1.82479 1.44537 1.21603 0.97764 0.96446 0.99752 1.22022 0.97587 0.95201 1.02262 1.67169 1.25810 1.08969 1.23661 1.22283 0.91289 0.99049 0.87638 0.77742 0.86589 1.18071 1.18338 0.84679 0.84857 0.75800 0.89939 0.90561 0.89986 0.89639 0.90138 0.89903 0.90782 0.90487 0.82810 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.53 12.84 -35.23 -0.45 -0.99 16 2 C -0.06 0.03 2.82 36.00 0.10 0.13 16 3 Si 0.68 -0.74 29.91 -169.99 -5.08 -5.82 16 4 C -0.23 -0.04 5.36 -104.46 -0.56 -0.60 16 5 C 0.00 0.00 9.83 -39.32 -0.39 -0.39 16 6 C -0.24 0.03 8.83 -39.23 -0.35 -0.32 16 7 C 0.41 0.32 7.63 -155.00 -1.18 -0.87 16 8 N -0.72 1.07 5.25 -53.93 -0.28 0.79 16 9 C 0.15 -0.50 2.14 -67.93 -0.15 -0.64 16 10 H 0.09 -0.28 6.45 -51.93 -0.33 -0.61 16 11 C -0.12 0.51 5.39 -26.73 -0.14 0.37 16 12 C -0.12 0.43 4.96 -26.73 -0.13 0.30 16 13 C -0.13 0.41 2.16 -90.63 -0.20 0.22 16 14 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 15 C 0.45 -0.20 2.69 37.16 0.10 -0.10 16 16 F -0.18 -0.14 16.80 2.25 0.04 -0.11 16 17 F -0.18 -0.17 16.80 2.25 0.04 -0.14 16 18 F -0.18 -0.10 16.28 2.25 0.04 -0.06 16 19 C -0.12 0.39 4.96 -26.71 -0.13 0.26 16 20 C -0.13 0.43 5.42 -26.71 -0.14 0.29 16 21 N -0.54 -1.14 10.39 -12.44 -0.13 -1.27 16 22 C 0.16 0.13 9.84 -17.57 -0.17 -0.05 16 23 H 0.38 -0.61 8.70 45.56 0.40 -0.22 16 24 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 25 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 26 H -0.26 -0.21 7.01 56.52 0.40 0.19 16 27 H 0.14 -0.13 8.06 -52.49 -0.42 -0.56 16 28 H 0.13 -0.24 6.08 -52.49 -0.32 -0.56 16 29 H 0.41 -0.76 8.73 -40.82 -0.36 -1.12 16 30 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 31 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.08 -0.29 7.80 -51.93 -0.41 -0.70 16 33 H 0.08 -0.31 7.80 -51.92 -0.41 -0.72 16 34 H 0.08 -0.26 7.80 -51.93 -0.41 -0.67 16 35 H 0.08 -0.24 7.80 -51.93 -0.41 -0.65 16 36 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.08 -0.18 7.66 -51.93 -0.40 -0.58 16 38 H 0.16 -0.14 4.85 -52.48 -0.25 -0.39 16 LS Contribution 316.68 15.07 4.77 4.77 Total: 0.00 -5.56 316.68 -9.02 -14.58 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -4.62 Total: -10.36 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -3.34 Total: -1.40 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.41 Total: -0.48 kcal Atomic # 8 Polarization: -0.53 SS G_CDS: -0.45 Total: -0.99 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.11 Total: -0.31 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.08 Total: -5.82 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -5.56 -9.02 -14.58 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12301706_13915762.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.509 kcal (2) G-P(sol) polarization free energy of solvation -5.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds