Wall clock time and date at job start Tue Mar 9 2021 13:19:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50700 * 109.46837 * 119.99435 * 2 1 3 5 5 C 1.38606 * 120.72306 * 244.72163 * 4 2 1 6 6 N 1.32276 * 119.19556 * 179.71926 * 5 4 2 7 7 C 1.32492 * 120.73785 * 0.56988 * 6 5 4 8 8 N 1.38409 * 119.21371 * 179.72647 * 7 6 5 9 9 C 1.46500 * 120.00079 * 359.97438 * 8 7 6 10 10 C 1.53000 * 109.47249 * 179.97438 * 9 8 7 11 11 H 1.08994 * 112.84916 * 314.66651 * 10 9 8 12 12 C 1.53788 * 113.61266 * 85.85979 * 10 9 8 13 13 C 1.53953 * 87.01474 * 139.95319 * 12 10 9 14 14 H 1.09004 * 113.54072 * 89.19148 * 13 12 10 15 15 O 1.42905 * 113.74003 * 220.05059 * 13 12 10 16 16 C 1.53776 * 113.61468 * 183.46775 * 10 9 8 17 17 N 1.32490 * 121.56823 * 359.70674 * 7 6 5 18 18 C 1.32276 * 120.74109 * 359.97438 * 17 7 6 19 19 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 20 20 H 1.08997 * 109.47097 * 240.00027 * 2 1 3 21 21 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 22 22 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 23 23 H 1.08003 * 120.39990 * 0.02562 * 5 4 2 24 24 H 0.97002 * 120.00235 * 179.97438 * 8 7 6 25 25 H 1.09005 * 109.46624 * 299.99389 * 9 8 7 26 26 H 1.08995 * 109.47681 * 59.99457 * 9 8 7 27 27 H 1.09006 * 113.61169 * 254.52744 * 12 10 9 28 28 H 1.08990 * 113.61575 * 25.43527 * 12 10 9 29 29 H 0.96697 * 114.00308 * 277.59590 * 15 13 12 30 30 H 1.09003 * 113.61756 * 334.56534 * 16 10 9 31 31 H 1.08997 * 113.61653 * 105.47311 * 16 10 9 32 32 H 1.08001 * 120.39936 * 179.97438 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6470 -0.0262 2.2005 6 7 3.0687 -0.6783 3.2713 7 6 2.8235 -1.9722 3.4164 8 7 3.2844 -2.6245 4.5468 9 6 4.0341 -1.8846 5.5650 10 6 4.4230 -2.8325 6.7013 11 1 3.6004 -3.4735 7.0180 12 6 5.7346 -3.5941 6.4465 13 6 6.0618 -3.3661 7.9335 14 1 5.6881 -4.1542 8.5873 15 8 7.4328 -3.0458 8.1783 16 6 5.1438 -2.1343 7.8665 17 7 2.1473 -2.6564 2.5054 18 6 1.6922 -2.0631 1.4143 19 1 -0.3933 0.4418 0.7650 20 1 1.7923 -0.5138 -0.8900 21 1 3.5346 1.7703 0.0321 22 1 1.5616 2.4679 -1.2086 23 1 2.8536 1.0277 2.0858 24 1 3.1111 -3.5716 4.6649 25 1 4.9348 -1.4634 5.1184 26 1 3.4139 -1.0800 5.9598 27 1 5.5873 -4.6424 6.1866 28 1 6.4132 -3.0796 5.7663 29 1 8.0152 -3.8165 8.2216 30 1 5.6606 -1.2199 7.5752 31 1 4.5204 -2.0058 8.7513 32 1 1.1419 -2.6263 0.6750 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12309070_12175864.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:45 Heat of formation + Delta-G solvation = 5.705140 kcal Electronic energy + Delta-G solvation = -16407.389000 eV Core-core repulsion = 13563.893519 eV Total energy + Delta-G solvation = -2843.495481 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.05185 -40.54315 -38.20143 -37.03385 -35.61564 -34.66998 -32.53935 -28.92489 -26.86614 -26.24719 -25.76745 -23.49197 -22.90804 -20.78031 -19.39065 -18.67810 -18.47120 -17.99971 -16.75168 -16.51144 -16.23872 -16.16707 -15.76511 -15.51986 -15.07162 -14.85731 -14.54332 -14.06574 -13.74064 -13.53608 -13.17562 -12.66249 -12.52669 -12.21116 -12.05519 -11.83135 -11.74774 -11.53921 -11.20309 -10.82191 -10.57453 -9.99897 -9.08414 -5.10441 0.08872 0.18639 1.23257 1.57271 1.81186 1.93223 2.85761 3.07745 3.21367 3.36301 3.42852 3.45477 3.63170 3.67662 3.72920 3.81496 3.87287 4.10331 4.21416 4.24512 4.50606 4.60153 4.65445 4.70763 4.75153 4.76484 4.88441 5.04313 5.20292 5.29839 5.78058 6.02191 6.41799 6.52176 6.63706 7.31585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.296 4.296 5 C 0.201 3.799 6 N -0.562 5.562 7 C 0.566 3.434 8 N -0.694 5.694 9 C 0.149 3.851 10 C -0.126 4.126 11 H 0.100 0.900 12 C -0.165 4.165 13 C 0.075 3.925 14 H 0.083 0.917 15 O -0.560 6.560 16 C -0.117 4.117 17 N -0.570 5.570 18 C 0.223 3.777 19 H 0.379 0.621 20 H 0.115 0.885 21 H -0.255 1.255 22 H -0.251 1.251 23 H 0.166 0.834 24 H 0.415 0.585 25 H 0.071 0.929 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.092 0.908 29 H 0.380 0.620 30 H 0.095 0.905 31 H 0.079 0.921 32 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.473 -0.081 2.451 2.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.581 3.419 4 C -0.304 4.304 5 C 0.033 3.967 6 N -0.285 5.285 7 C 0.210 3.790 8 N -0.331 5.331 9 C 0.025 3.975 10 C -0.145 4.145 11 H 0.118 0.882 12 C -0.203 4.203 13 C 0.016 3.984 14 H 0.101 0.899 15 O -0.365 6.365 16 C -0.155 4.155 17 N -0.292 5.292 18 C 0.055 3.945 19 H 0.226 0.774 20 H 0.133 0.867 21 H -0.180 1.180 22 H -0.175 1.175 23 H 0.183 0.817 24 H 0.252 0.748 25 H 0.089 0.911 26 H 0.090 0.910 27 H 0.089 0.911 28 H 0.110 0.890 29 H 0.227 0.773 30 H 0.114 0.886 31 H 0.097 0.903 32 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 0.326 0.434 2.489 2.548 hybrid contribution -0.089 -1.209 -0.912 1.517 sum 0.238 -0.776 1.577 1.773 Atomic orbital electron populations 1.86510 1.17155 1.81641 1.49277 1.24695 0.85090 1.09614 0.96399 0.95002 0.81113 0.77809 0.87931 1.21702 1.09154 0.97879 1.01690 1.22764 0.88141 0.99168 0.86636 1.67922 1.27083 1.08324 1.25158 1.19396 0.87124 0.85529 0.86968 1.44162 1.58622 1.12193 1.18104 1.21316 0.95964 0.93778 0.86436 1.22592 0.97453 0.98452 0.95963 0.88159 1.23827 0.97087 1.01084 0.98321 1.23351 0.82363 0.97867 0.94805 0.89923 1.86536 1.18173 1.37044 1.94769 1.23023 0.96511 0.98161 0.97828 1.67984 1.16689 1.39994 1.04503 1.22833 0.89148 0.90965 0.91556 0.77367 0.86742 1.18004 1.17510 0.81694 0.74794 0.91051 0.90966 0.91056 0.88974 0.77275 0.88603 0.90250 0.81302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.33 12.85 -35.23 -0.45 -0.13 16 2 C -0.05 0.05 2.83 36.01 0.10 0.15 16 3 Si 0.68 -1.20 29.88 -169.99 -5.08 -6.28 16 4 C -0.30 -0.03 5.36 -104.35 -0.56 -0.59 16 5 C 0.20 0.10 9.92 -17.22 -0.17 -0.07 16 6 N -0.56 -1.43 9.59 -13.93 -0.13 -1.57 16 7 C 0.57 1.58 8.43 -322.81 -2.72 -1.14 16 8 N -0.69 -0.41 5.70 -62.31 -0.36 -0.76 16 9 C 0.15 -0.09 5.47 -4.04 -0.02 -0.11 16 10 C -0.13 0.26 3.75 -89.81 -0.34 -0.08 16 11 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 12 C -0.17 0.26 7.48 -25.82 -0.19 0.07 16 13 C 0.08 -0.09 5.21 -25.83 -0.13 -0.22 16 14 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 15 O -0.56 -0.23 13.68 -35.23 -0.48 -0.71 16 16 C -0.12 0.16 7.47 -25.92 -0.19 -0.04 16 17 N -0.57 -1.71 10.46 -13.93 -0.15 -1.86 16 18 C 0.22 0.28 10.99 -17.23 -0.19 0.09 16 19 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 20 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 21 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 22 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 23 H 0.17 -0.37 5.07 -52.48 -0.27 -0.63 16 24 H 0.41 -0.24 8.59 -40.82 -0.35 -0.59 16 25 H 0.07 0.03 7.88 -51.93 -0.41 -0.38 16 26 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 28 H 0.09 -0.03 7.92 -51.93 -0.41 -0.44 16 29 H 0.38 -1.33 9.12 45.56 0.42 -0.91 16 30 H 0.10 -0.04 8.10 -51.93 -0.42 -0.46 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.17 -0.09 8.06 -52.49 -0.42 -0.52 16 LS Contribution 275.38 15.07 4.15 4.15 Total: 0.00 -7.32 275.38 -10.11 -17.43 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -3.19 Total: -8.33 kcal Atomic # 6 Polarization: 2.48 SS G_CDS: -4.42 Total: -1.94 kcal Atomic # 7 Polarization: -3.55 SS G_CDS: -0.63 Total: -4.19 kcal Atomic # 8 Polarization: 0.09 SS G_CDS: -0.93 Total: -0.84 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -7.32 -10.11 -17.43 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12309070_12175864.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.134 kcal (2) G-P(sol) polarization free energy of solvation -7.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.429 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds