Wall clock time and date at job start Tue Mar 9 2021 13:19:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50699 * 109.47152 * 119.99802 * 2 1 3 5 5 C 1.38831 * 120.33773 * 65.00197 * 4 2 1 6 6 C 1.38342 * 118.50704 * 180.02562 * 5 4 2 7 7 C 1.39094 * 119.09843 * 0.02562 * 6 5 4 8 8 N 1.39004 * 119.70757 * 179.97438 * 7 6 5 9 9 C 1.46502 * 119.99585 * 0.02562 * 8 7 6 10 10 C 1.53005 * 109.46804 * 180.02562 * 9 8 7 11 11 H 1.09003 * 112.84813 * 314.65926 * 10 9 8 12 12 C 1.53781 * 113.61904 * 85.86163 * 10 9 8 13 13 C 1.53949 * 87.02059 * 139.95184 * 12 10 9 14 14 H 1.08998 * 113.61898 * 89.20207 * 13 12 10 15 15 O 1.42907 * 113.66310 * 220.06990 * 13 12 10 16 16 C 1.53780 * 87.11161 * 334.63512 * 13 12 10 17 17 N 1.32424 * 120.59015 * 0.02562 * 7 6 5 18 18 C 1.31943 * 121.62259 * 359.66386 * 17 7 6 19 19 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 20 20 H 1.08997 * 109.47332 * 240.00042 * 2 1 3 21 21 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 22 22 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 23 23 H 1.08006 * 120.74640 * 359.97438 * 5 4 2 24 24 H 1.07995 * 120.45017 * 179.97438 * 6 5 4 25 25 H 0.96993 * 120.00240 * 179.97438 * 8 7 6 26 26 H 1.09003 * 109.47068 * 299.99673 * 9 8 7 27 27 H 1.08996 * 109.47551 * 59.99802 * 9 8 7 28 28 H 1.08994 * 113.61385 * 254.52975 * 12 10 9 29 29 H 1.08997 * 113.60967 * 25.42987 * 12 10 9 30 30 H 0.96700 * 113.99261 * 277.55473 * 15 13 12 31 31 H 1.09000 * 113.61929 * 270.81515 * 16 13 12 32 32 H 1.09005 * 113.61482 * 139.91242 * 16 13 12 33 33 H 1.08001 * 119.57389 * 180.31018 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6877 -2.0658 1.4063 6 6 2.1658 -2.6796 2.5502 7 6 2.8699 -1.9223 3.4804 8 7 3.3555 -2.5261 4.6345 9 6 3.1252 -3.9542 4.8664 10 6 3.7573 -4.3629 6.1985 11 1 4.7640 -3.9658 6.3288 12 6 2.8416 -4.1305 7.4119 13 6 3.3567 -5.4751 7.9567 14 1 4.2534 -5.3833 8.5694 15 8 2.3422 -6.2706 8.5734 16 6 3.6448 -5.8671 6.4978 17 7 3.0809 -0.6309 3.2769 18 6 2.6420 -0.0206 2.1926 19 1 -0.3934 0.4416 -0.7651 20 1 1.7924 -0.5138 -0.8899 21 1 1.5877 2.4585 -1.2243 22 1 1.5613 2.4680 1.2084 23 1 1.1366 -2.6282 0.6670 24 1 1.9939 -3.7324 2.7190 25 1 3.8473 -2.0021 5.2858 26 1 2.0532 -4.1489 4.8984 27 1 3.5752 -4.5307 4.0582 28 1 3.1307 -3.2728 8.0191 29 1 1.7799 -4.1372 7.1652 30 1 2.1566 -6.0288 9.4911 31 1 2.8031 -6.3494 6.0008 32 1 4.5815 -6.4093 6.3682 33 1 2.8372 1.0331 2.0580 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12309070_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:47 Heat of formation + Delta-G solvation = -9.833231 kcal Electronic energy + Delta-G solvation = -16248.964502 eV Core-core repulsion = 13470.221138 eV Total energy + Delta-G solvation = -2778.743364 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 237.115 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.33418 -40.48931 -38.07678 -36.98621 -35.56897 -33.41901 -31.71821 -28.74491 -26.86876 -25.87298 -24.83575 -23.35882 -22.16094 -20.73781 -18.86303 -18.48935 -18.38156 -17.87011 -16.68624 -16.51378 -16.09605 -15.86993 -15.48180 -15.29574 -14.85262 -14.66841 -14.04696 -13.88559 -13.78705 -13.68205 -13.55454 -12.68174 -12.56780 -12.26892 -12.04691 -11.88719 -11.50144 -11.07065 -10.83519 -10.64358 -10.53306 -10.24062 -8.64319 -4.94420 0.33104 0.50798 1.31622 1.60894 1.97865 2.09234 2.87927 3.11949 3.35853 3.44323 3.45352 3.64817 3.68215 3.81354 3.88588 4.04058 4.08958 4.16934 4.19743 4.38909 4.48286 4.51328 4.61669 4.67217 4.68473 4.81920 4.85807 5.01903 5.09127 5.24460 5.36222 5.57946 6.04357 6.47472 6.58432 6.62499 7.23226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.060 4.060 3 Si 0.677 3.323 4 C -0.189 4.189 5 C -0.005 4.005 6 C -0.239 4.239 7 C 0.406 3.594 8 N -0.722 5.722 9 C 0.140 3.860 10 C -0.123 4.123 11 H 0.101 0.899 12 C -0.165 4.165 13 C 0.075 3.925 14 H 0.083 0.917 15 O -0.560 6.560 16 C -0.119 4.119 17 N -0.539 5.539 18 C 0.159 3.841 19 H 0.378 0.622 20 H 0.074 0.926 21 H -0.260 1.260 22 H -0.253 1.253 23 H 0.134 0.866 24 H 0.133 0.867 25 H 0.406 0.594 26 H 0.067 0.933 27 H 0.068 0.932 28 H 0.071 0.929 29 H 0.092 0.908 30 H 0.380 0.620 31 H 0.094 0.906 32 H 0.079 0.921 33 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.727 -1.263 -0.222 3.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.578 3.422 4 C -0.194 4.194 5 C -0.030 4.030 6 C -0.264 4.264 7 C 0.171 3.829 8 N -0.355 5.355 9 C 0.015 3.985 10 C -0.141 4.141 11 H 0.119 0.881 12 C -0.203 4.203 13 C 0.016 3.984 14 H 0.101 0.899 15 O -0.366 6.366 16 C -0.157 4.157 17 N -0.256 5.256 18 C 0.001 3.999 19 H 0.226 0.774 20 H 0.092 0.908 21 H -0.185 1.185 22 H -0.178 1.178 23 H 0.152 0.848 24 H 0.151 0.849 25 H 0.241 0.759 26 H 0.085 0.915 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.110 0.890 30 H 0.228 0.772 31 H 0.113 0.887 32 H 0.098 0.902 33 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 3.023 -0.780 0.404 3.148 hybrid contribution -1.389 -0.107 -0.350 1.436 sum 1.635 -0.888 0.054 1.861 Atomic orbital electron populations 1.86602 1.18142 1.80070 1.49723 1.24526 0.84134 1.10581 0.97817 0.95182 0.91697 0.74859 0.80441 1.19897 1.05832 0.95128 0.98583 1.21168 0.92899 0.93484 0.95483 1.21430 1.06778 1.01408 0.96781 1.18381 0.89337 0.88460 0.86738 1.44469 1.60835 1.09320 1.20856 1.21390 1.00265 0.80237 0.96582 1.22539 1.00261 0.97387 0.93945 0.88052 1.23817 1.00652 0.98497 0.97297 1.23350 0.90809 0.90559 0.93675 0.89890 1.86532 1.58246 1.60543 1.31247 1.23042 1.03082 0.95030 0.94534 1.67164 1.26210 1.09030 1.23207 1.22196 0.91655 0.98839 0.87233 0.77381 0.90814 1.18500 1.17801 0.84800 0.84927 0.75862 0.91518 0.91415 0.90995 0.88968 0.77230 0.88706 0.90246 0.82805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.85 12.82 -35.23 -0.45 -1.30 16 2 C -0.06 -0.02 2.81 36.01 0.10 0.08 16 3 Si 0.68 -0.36 29.87 -169.99 -5.08 -5.43 16 4 C -0.19 -0.40 5.39 -104.46 -0.56 -0.97 16 5 C 0.00 -0.01 9.83 -39.32 -0.39 -0.40 16 6 C -0.24 -0.41 9.33 -39.23 -0.37 -0.78 16 7 C 0.41 1.08 7.65 -155.01 -1.19 -0.11 16 8 N -0.72 -0.25 5.73 -60.42 -0.35 -0.60 16 9 C 0.14 -0.21 4.72 -4.04 -0.02 -0.23 16 10 C -0.12 0.29 3.75 -89.80 -0.34 -0.05 16 11 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 12 C -0.16 0.28 7.48 -25.83 -0.19 0.08 16 13 C 0.08 -0.10 5.21 -25.83 -0.13 -0.23 16 14 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 15 O -0.56 -0.17 13.67 -35.23 -0.48 -0.65 16 16 C -0.12 0.20 7.47 -25.92 -0.19 0.00 16 17 N -0.54 -2.08 10.39 -12.44 -0.13 -2.21 16 18 C 0.16 0.42 9.84 -17.56 -0.17 0.25 16 19 H 0.38 -0.93 8.74 45.56 0.40 -0.53 16 20 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 21 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 22 H -0.25 -0.66 7.06 56.52 0.40 -0.27 16 23 H 0.13 0.04 8.06 -52.48 -0.42 -0.38 16 24 H 0.13 -0.02 6.71 -52.49 -0.35 -0.37 16 25 H 0.41 -0.07 8.60 -40.82 -0.35 -0.42 16 26 H 0.07 -0.08 7.66 -51.93 -0.40 -0.47 16 27 H 0.07 -0.13 7.93 -51.93 -0.41 -0.54 16 28 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.09 -0.05 7.92 -51.93 -0.41 -0.46 16 30 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 31 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.16 0.11 4.87 -52.49 -0.26 -0.15 16 LS Contribution 278.36 15.07 4.19 4.19 Total: 0.00 -7.11 278.36 -9.26 -16.37 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -3.51 Total: -8.02 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -3.45 Total: -2.34 kcal Atomic # 7 Polarization: -2.33 SS G_CDS: -0.48 Total: -2.81 kcal Atomic # 8 Polarization: -1.02 SS G_CDS: -0.93 Total: -1.95 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.08 Total: -5.43 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -7.11 -9.26 -16.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12309070_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.532 kcal (2) G-P(sol) polarization free energy of solvation -7.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds