Wall clock time and date at job start Tue Mar 9 2021 13:20:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42903 * 113.99603 * 2 1 4 4 H 1.08996 * 112.90806 * 18.74800 * 3 2 1 5 5 C 1.53784 * 113.61282 * 149.99932 * 3 2 1 6 6 C 1.53776 * 87.08158 * 89.11048 * 5 3 2 7 7 H 1.08996 * 113.61742 * 270.79755 * 6 5 3 8 8 N 1.46506 * 113.61435 * 139.97955 * 6 5 3 9 9 C 1.39138 * 119.99929 * 154.72273 * 8 6 5 10 10 N 1.32339 * 119.72222 * 359.73186 * 9 8 6 11 11 C 1.32009 * 121.65074 * 179.70910 * 10 9 8 12 12 C 1.37986 * 120.89733 * 0.56504 * 11 10 9 13 13 C 1.50697 * 120.32942 * 179.74799 * 12 11 10 14 14 O 1.42894 * 109.47377 * 119.97610 * 13 12 11 15 15 Si 1.86299 * 109.46747 * 359.97438 * 13 12 11 16 16 C 1.38914 * 119.34921 * 359.72368 * 12 11 10 17 17 C 1.38442 * 118.48038 * 359.97438 * 16 12 11 18 18 F 1.35108 * 120.46969 * 180.02562 * 17 16 12 19 19 C 1.53776 * 113.61078 * 247.49132 * 3 2 1 20 20 H 1.09003 * 109.47211 * 60.00302 * 1 2 3 21 21 H 1.09000 * 109.47018 * 180.02562 * 1 2 3 22 22 H 1.08999 * 109.47534 * 300.00031 * 1 2 3 23 23 H 1.09008 * 113.61124 * 334.56080 * 5 3 2 24 24 H 1.08999 * 113.61131 * 203.66276 * 5 3 2 25 25 H 0.97005 * 119.99811 * 335.00301 * 8 6 5 26 26 H 1.07991 * 119.55525 * 180.29103 * 11 10 9 27 27 H 1.08997 * 109.47087 * 239.97954 * 13 12 11 28 28 H 0.96702 * 114.00170 * 299.99949 * 14 13 12 29 29 H 1.48503 * 109.99938 * 58.68388 * 15 13 12 30 30 H 1.48500 * 109.99833 * 180.02562 * 15 13 12 31 31 H 1.07991 * 120.75884 * 179.97438 * 16 12 11 32 32 H 1.09009 * 113.61629 * 156.33754 * 19 3 2 33 33 H 1.09007 * 113.61606 * 25.43415 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3141 2.0798 0.3227 5 6 3.3755 1.3720 0.7046 6 6 4.0061 1.0331 -0.6564 7 1 4.1098 -0.0371 -0.8352 8 7 5.2364 1.7782 -0.9350 9 6 6.1845 1.2541 -1.8081 10 7 5.9718 0.0796 -2.3797 11 6 6.8427 -0.4506 -3.2181 12 6 8.0206 0.2007 -3.5221 13 6 9.0084 -0.4190 -4.4766 14 8 9.2015 0.4510 -5.5937 15 14 8.3522 -2.0578 -5.0720 16 6 8.2867 1.4336 -2.9399 17 6 7.3523 1.9680 -2.0694 18 9 7.5699 3.1647 -1.4810 19 6 2.7534 1.6488 -1.3017 20 1 -0.3634 0.5138 -0.8900 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3634 0.5138 0.8899 23 1 3.5169 0.5959 1.4568 24 1 3.6310 2.3672 1.0685 25 1 5.3917 2.6351 -0.5077 26 1 6.6326 -1.4092 -3.6689 27 1 9.9595 -0.5721 -3.9666 28 1 8.3949 0.6319 -6.0954 29 1 7.0404 -1.8668 -5.7412 30 1 9.3176 -2.6796 -6.0137 31 1 9.2015 1.9630 -3.1613 32 1 2.8389 2.7198 -1.4863 33 1 2.3927 1.0962 -2.1693 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12343578_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:31 Heat of formation + Delta-G solvation = -42.625515 kcal Electronic energy + Delta-G solvation = -18752.773293 eV Core-core repulsion = 15503.153973 eV Total energy + Delta-G solvation = -3249.619320 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.83847 -41.47321 -40.54877 -38.22287 -37.33819 -35.01605 -33.14167 -31.19825 -27.77915 -26.89498 -26.60358 -25.63421 -24.03738 -22.85496 -20.90493 -19.24768 -18.74670 -18.34545 -17.71861 -17.33099 -16.94761 -16.75506 -16.20500 -16.12997 -15.98449 -15.57899 -15.43123 -14.93710 -14.55530 -14.28937 -13.94185 -13.59463 -13.47234 -13.41052 -13.13954 -12.66028 -12.43391 -12.19584 -12.01291 -11.47582 -11.15334 -10.74096 -10.60044 -10.55365 -10.49388 -8.73161 -4.99026 -0.03337 0.15305 1.23827 1.56635 1.94107 2.01380 2.57737 2.60469 3.06929 3.29025 3.36649 3.47354 3.56205 3.58182 3.82221 3.86459 3.99767 4.05766 4.26974 4.41093 4.42003 4.46591 4.51223 4.57587 4.71355 4.73103 4.76906 4.96422 4.99598 5.00822 5.04663 5.46401 5.98564 6.17961 6.22093 6.36746 6.99560 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.368 6.368 3 C 0.065 3.935 4 H 0.080 0.920 5 C -0.151 4.151 6 C 0.143 3.857 7 H 0.126 0.874 8 N -0.707 5.707 9 C 0.391 3.609 10 N -0.511 5.511 11 C 0.149 3.851 12 C -0.209 4.209 13 C -0.061 4.061 14 O -0.530 6.530 15 Si 0.682 3.318 16 C -0.038 4.038 17 C -0.022 4.022 18 F -0.134 7.134 19 C -0.173 4.173 20 H 0.043 0.957 21 H 0.089 0.911 22 H 0.044 0.956 23 H 0.086 0.914 24 H 0.096 0.904 25 H 0.411 0.589 26 H 0.163 0.837 27 H 0.120 0.880 28 H 0.376 0.624 29 H -0.256 1.256 30 H -0.254 1.254 31 H 0.149 0.851 32 H 0.090 0.910 33 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.440 -0.547 1.819 3.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.286 6.286 3 C 0.006 3.994 4 H 0.098 0.902 5 C -0.189 4.189 6 C 0.038 3.962 7 H 0.143 0.857 8 N -0.339 5.339 9 C 0.153 3.847 10 N -0.227 5.227 11 C -0.008 4.008 12 C -0.215 4.215 13 C -0.172 4.172 14 O -0.337 6.337 15 Si 0.582 3.418 16 C -0.064 4.064 17 C -0.049 4.049 18 F -0.113 7.113 19 C -0.213 4.213 20 H 0.062 0.938 21 H 0.107 0.893 22 H 0.062 0.938 23 H 0.104 0.896 24 H 0.114 0.886 25 H 0.249 0.751 26 H 0.180 0.820 27 H 0.138 0.862 28 H 0.224 0.776 29 H -0.181 1.181 30 H -0.178 1.178 31 H 0.167 0.833 32 H 0.109 0.891 33 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -2.898 -1.715 1.597 3.727 hybrid contribution 0.350 2.301 -0.584 2.400 sum -2.549 0.586 1.014 2.805 Atomic orbital electron populations 1.22851 0.80424 1.03178 1.00162 1.87898 1.20114 1.26054 1.94544 1.22836 0.94201 0.85742 0.96574 0.90159 1.23662 0.94439 1.03246 0.97560 1.22523 0.81055 0.98034 0.94566 0.85664 1.44670 1.18722 1.23595 1.46909 1.18477 0.86776 0.89438 0.89997 1.67310 1.32759 1.10078 1.12587 1.22350 0.88347 0.98164 0.91969 1.20867 0.98744 0.97321 1.04546 1.24820 1.02456 1.02290 0.87594 1.86606 1.37548 1.67183 1.42314 0.95107 0.79414 0.79339 0.87918 1.21273 0.98366 0.94654 0.92086 1.18016 0.97481 0.85673 1.03681 1.91490 1.94861 1.42317 1.82640 1.24031 0.96825 1.01793 0.98625 0.93825 0.89252 0.93781 0.89559 0.88566 0.75128 0.82017 0.86200 0.77590 1.18095 1.17828 0.83322 0.89130 0.90192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.50 10.63 -35.23 -0.37 -0.88 16 3 C 0.07 -0.03 4.37 -25.92 -0.11 -0.14 16 4 H 0.08 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.15 0.16 7.66 -25.92 -0.20 -0.04 16 6 C 0.14 0.04 4.21 -67.12 -0.28 -0.24 16 7 H 0.13 0.26 7.40 -51.93 -0.38 -0.13 16 8 N -0.71 -0.35 5.51 -53.06 -0.29 -0.65 16 9 C 0.39 0.81 7.49 -154.86 -1.16 -0.35 16 10 N -0.51 -1.15 9.12 -12.37 -0.11 -1.26 16 11 C 0.15 0.06 9.84 -17.57 -0.17 -0.11 16 12 C -0.21 -0.01 5.40 -104.47 -0.56 -0.57 16 13 C -0.06 0.05 2.84 36.00 0.10 0.15 16 14 O -0.53 -0.35 12.78 -35.23 -0.45 -0.80 16 15 Si 0.68 -1.08 29.82 -169.99 -5.07 -6.15 16 16 C -0.04 -0.04 9.75 -39.26 -0.38 -0.42 16 17 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 18 F -0.13 -0.33 16.65 2.25 0.04 -0.29 16 19 C -0.17 0.04 7.71 -25.92 -0.20 -0.16 16 20 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 21 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 23 H 0.09 -0.04 8.14 -51.92 -0.42 -0.46 16 24 H 0.10 -0.25 8.12 -51.93 -0.42 -0.67 16 25 H 0.41 -0.35 8.20 -40.82 -0.33 -0.69 16 26 H 0.16 -0.29 4.88 -52.49 -0.26 -0.55 16 27 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 28 H 0.38 -0.77 8.70 45.56 0.40 -0.37 16 29 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 30 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 31 H 0.15 0.01 8.06 -52.49 -0.42 -0.41 16 32 H 0.09 -0.09 8.14 -51.92 -0.42 -0.51 16 33 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 LS Contribution 286.21 15.07 4.31 4.31 Total: 0.00 -5.38 286.21 -8.09 -13.47 By element: Atomic # 1 Polarization: -2.63 SS G_CDS: -3.98 Total: -6.61 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -2.16 Total: -1.15 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -0.41 Total: -1.91 kcal Atomic # 8 Polarization: -0.85 SS G_CDS: -0.82 Total: -1.68 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.07 Total: -6.15 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -5.38 -8.09 -13.47 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12343578_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.160 kcal (2) G-P(sol) polarization free energy of solvation -5.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.537 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.089 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.465 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds