Wall clock time and date at job start Tue Mar 9 2021 13:20:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.46850 * 2 1 4 4 C 1.50697 * 109.47579 * 120.00262 * 2 1 3 5 5 C 1.37982 * 120.32613 * 244.98123 * 4 2 1 6 6 N 1.32007 * 120.90207 * 180.02562 * 5 4 2 7 7 C 1.32341 * 121.64629 * 359.72225 * 6 5 4 8 8 N 1.39140 * 119.71829 * 180.27154 * 7 6 5 9 9 C 1.46495 * 120.00119 * 0.26510 * 8 7 6 10 10 H 1.08994 * 112.85515 * 336.19785 * 9 8 7 11 11 C 1.53784 * 113.61423 * 107.50518 * 9 8 7 12 12 C 1.53777 * 87.08243 * 139.97934 * 11 9 8 13 13 H 1.09004 * 113.61829 * 89.11642 * 12 11 9 14 14 C 1.53000 * 113.69409 * 220.00930 * 12 11 9 15 15 O 1.42900 * 109.47110 * 272.53778 * 14 12 11 16 16 C 1.53781 * 87.08383 * 334.56704 * 12 11 9 17 17 C 1.39348 * 120.55873 * 0.53561 * 7 6 5 18 18 F 1.35104 * 120.46812 * 179.75154 * 17 7 6 19 19 C 1.38439 * 119.05915 * 359.48391 * 17 7 6 20 20 H 0.96699 * 113.99821 * 299.99090 * 1 2 3 21 21 H 1.09007 * 109.46916 * 240.00431 * 2 1 3 22 22 H 1.48500 * 110.00140 * 300.00158 * 3 2 1 23 23 H 1.48494 * 109.99976 * 61.32281 * 3 2 1 24 24 H 1.08006 * 119.54991 * 0.03970 * 5 4 2 25 25 H 0.97006 * 119.99496 * 180.26662 * 8 7 6 26 26 H 1.08994 * 113.61521 * 254.52884 * 11 9 8 27 27 H 1.09001 * 113.61293 * 25.43199 * 11 9 8 28 28 H 1.09002 * 109.46866 * 32.53163 * 14 12 11 29 29 H 1.08999 * 109.47653 * 152.53824 * 14 12 11 30 30 H 0.96696 * 114.00123 * 180.02562 * 15 14 12 31 31 H 1.09001 * 113.61522 * 270.88209 * 16 12 11 32 32 H 1.08998 * 113.69477 * 139.98716 * 16 12 11 33 33 H 1.08001 * 120.75662 * 180.22632 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6386 -0.0203 2.1934 6 7 3.0844 -0.6313 3.2753 7 6 2.8691 -1.9204 3.4832 8 7 3.3525 -2.5227 4.6406 9 6 4.0913 -1.7289 5.6256 10 1 4.5509 -0.8398 5.1940 11 6 3.2977 -1.4511 6.9132 12 6 4.6088 -1.6918 7.6798 13 1 5.2096 -0.7918 7.8109 14 6 4.4258 -2.4784 8.9793 15 8 4.1288 -1.5745 10.0454 16 6 5.0525 -2.5608 6.4911 17 6 2.1670 -2.6809 2.5501 18 9 1.9525 -3.9979 2.7619 19 6 1.6876 -2.0666 1.4059 20 1 -0.3933 0.4416 0.7651 21 1 1.7923 -0.5138 -0.8901 22 1 1.5613 2.4679 -1.2085 23 1 1.5878 2.4585 1.2242 24 1 2.8298 1.0344 2.0604 25 1 3.2003 -3.4682 4.7952 26 1 2.9301 -0.4277 6.9873 27 1 2.5279 -2.1945 7.1206 28 1 3.6045 -3.1857 8.8632 29 1 5.3430 -3.0210 9.2079 30 1 4.0002 -2.0049 10.9017 31 1 4.7625 -3.6075 6.5831 32 1 6.1015 -2.4342 6.2235 33 1 1.1368 -2.6290 0.6665 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12366698_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:56 Heat of formation + Delta-G solvation = -55.648825 kcal Electronic energy + Delta-G solvation = -18631.998973 eV Core-core repulsion = 15381.814920 eV Total energy + Delta-G solvation = -3250.184053 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.86082 -41.49148 -40.39725 -38.14438 -37.36749 -35.44416 -33.20279 -31.41240 -28.78194 -26.81734 -26.44574 -25.18540 -23.22248 -22.50253 -20.84664 -19.26913 -18.60285 -18.34283 -18.23366 -17.60049 -16.95627 -16.68220 -16.36843 -16.13881 -15.91292 -15.54951 -15.45351 -14.73784 -14.53086 -14.34225 -14.00076 -13.56176 -13.51590 -13.42615 -12.80422 -12.64064 -12.20799 -12.03184 -11.95347 -11.51305 -11.16148 -10.89035 -10.75670 -10.62356 -10.52478 -8.75838 -5.00783 -0.05782 0.12858 1.21957 1.54049 1.92388 1.97035 2.54943 3.03729 3.10011 3.27010 3.35430 3.43825 3.56103 3.60095 3.79113 3.84250 3.94879 4.00650 4.32248 4.37001 4.43269 4.47440 4.52390 4.60603 4.68520 4.71851 4.75714 4.97877 5.01900 5.04641 5.24047 5.47731 5.96477 6.18564 6.35673 6.63690 6.96190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.209 4.209 5 C 0.147 3.853 6 N -0.512 5.512 7 C 0.391 3.609 8 N -0.706 5.706 9 C 0.136 3.864 10 H 0.122 0.878 11 C -0.145 4.145 12 C -0.108 4.108 13 H 0.103 0.897 14 C 0.086 3.914 15 O -0.573 6.573 16 C -0.141 4.141 17 C -0.022 4.022 18 F -0.134 7.134 19 C -0.037 4.037 20 H 0.376 0.624 21 H 0.120 0.880 22 H -0.254 1.254 23 H -0.256 1.256 24 H 0.164 0.836 25 H 0.412 0.588 26 H 0.075 0.925 27 H 0.082 0.918 28 H 0.046 0.954 29 H 0.048 0.952 30 H 0.381 0.619 31 H 0.087 0.913 32 H 0.081 0.919 33 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.719 -0.885 1.110 3.067 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.584 3.416 4 C -0.214 4.214 5 C -0.010 4.010 6 N -0.229 5.229 7 C 0.153 3.847 8 N -0.338 5.338 9 C 0.031 3.969 10 H 0.140 0.860 11 C -0.184 4.184 12 C -0.127 4.127 13 H 0.121 0.879 14 C 0.009 3.991 15 O -0.379 6.379 16 C -0.179 4.179 17 C -0.048 4.048 18 F -0.113 7.113 19 C -0.063 4.063 20 H 0.224 0.776 21 H 0.138 0.862 22 H -0.178 1.178 23 H -0.181 1.181 24 H 0.180 0.820 25 H 0.249 0.751 26 H 0.093 0.907 27 H 0.101 0.899 28 H 0.064 0.936 29 H 0.066 0.934 30 H 0.228 0.772 31 H 0.105 0.895 32 H 0.099 0.901 33 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.213 0.607 0.827 3.373 hybrid contribution -1.720 -1.833 0.496 2.562 sum 1.493 -1.226 1.323 2.342 Atomic orbital electron populations 1.86613 1.17716 1.79952 1.49347 1.24827 0.83891 1.10826 0.97662 0.95067 0.91545 0.74275 0.80682 1.20852 1.05906 0.94538 1.00093 1.22407 0.91554 0.99529 0.87528 1.67301 1.25006 1.07308 1.23267 1.18481 0.90338 0.89011 0.86869 1.44628 1.58976 1.11873 1.18277 1.22521 0.92473 0.95575 0.86376 0.85995 1.23564 0.96809 1.02983 0.95094 1.22320 0.98512 0.99880 0.91968 0.87900 1.22150 0.98849 0.91251 0.86892 1.86492 1.93977 1.37288 1.20110 1.23399 1.00381 0.99358 0.94809 1.18013 1.08815 0.79529 0.98458 1.91491 1.93660 1.31231 1.94915 1.21286 0.95466 0.94437 0.95129 0.77585 0.86238 1.17837 1.18109 0.81987 0.75081 0.90652 0.89902 0.93577 0.93403 0.77233 0.89484 0.90079 0.83334 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.31 12.84 -35.23 -0.45 -0.76 16 2 C -0.06 0.06 2.82 36.00 0.10 0.16 16 3 Si 0.68 -1.23 29.91 -169.99 -5.08 -6.31 16 4 C -0.21 0.04 5.36 -104.47 -0.56 -0.52 16 5 C 0.15 0.02 9.83 -17.57 -0.17 -0.16 16 6 N -0.51 -0.92 9.13 -12.36 -0.11 -1.04 16 7 C 0.39 0.67 7.49 -154.86 -1.16 -0.49 16 8 N -0.71 -0.10 5.51 -53.06 -0.29 -0.39 16 9 C 0.14 -0.07 4.27 -67.12 -0.29 -0.35 16 10 H 0.12 0.04 7.40 -51.93 -0.38 -0.34 16 11 C -0.15 0.02 7.43 -25.92 -0.19 -0.17 16 12 C -0.11 0.08 4.01 -89.81 -0.36 -0.28 16 13 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 14 C 0.09 -0.08 6.89 37.16 0.26 0.18 16 15 O -0.57 -0.40 13.66 -35.23 -0.48 -0.88 16 16 C -0.14 0.27 7.39 -25.92 -0.19 0.08 16 17 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 18 F -0.13 -0.30 16.65 2.25 0.04 -0.27 16 19 C -0.04 -0.03 9.82 -39.26 -0.39 -0.41 16 20 H 0.38 -0.80 8.70 45.56 0.40 -0.41 16 21 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 22 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 23 H -0.26 0.00 7.01 56.52 0.40 0.40 16 24 H 0.16 -0.32 4.84 -52.48 -0.25 -0.57 16 25 H 0.41 -0.41 8.20 -40.82 -0.33 -0.75 16 26 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.08 0.00 7.90 -51.93 -0.41 -0.41 16 28 H 0.05 -0.07 7.85 -51.93 -0.41 -0.48 16 29 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.38 -1.31 9.12 45.56 0.42 -0.90 16 31 H 0.09 -0.23 8.08 -51.93 -0.42 -0.65 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.15 -0.03 8.06 -52.49 -0.42 -0.45 16 LS Contribution 285.15 15.07 4.30 4.30 Total: 0.00 -6.28 285.15 -8.45 -14.73 By element: Atomic # 1 Polarization: -3.97 SS G_CDS: -3.13 Total: -7.10 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -3.24 Total: -2.28 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -0.41 Total: -1.42 kcal Atomic # 8 Polarization: -0.71 SS G_CDS: -0.93 Total: -1.64 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.08 Total: -6.31 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -6.28 -8.45 -14.73 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12366698_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.918 kcal (2) G-P(sol) polarization free energy of solvation -6.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds