Wall clock time and date at job start Tue Mar 9 2021 13:21:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47259 * 2 1 4 4 C 1.50705 * 109.46775 * 240.00269 * 2 1 3 5 5 C 1.37987 * 120.32529 * 120.00052 * 4 2 1 6 6 N 1.32009 * 120.89826 * 179.97438 * 5 4 2 7 7 C 1.32336 * 121.64555 * 359.97438 * 6 5 4 8 8 N 1.39145 * 119.71722 * 179.97438 * 7 6 5 9 9 C 1.46505 * 119.99738 * 0.02562 * 8 7 6 10 10 H 1.08992 * 109.47276 * 325.00192 * 9 8 7 11 11 C 1.53002 * 109.46958 * 85.00105 * 9 8 7 12 12 C 1.52997 * 109.46978 * 180.02562 * 11 9 8 13 13 C 1.53006 * 109.47164 * 299.99874 * 12 11 9 14 14 H 1.08998 * 109.46505 * 299.99708 * 13 12 11 15 15 O 1.42895 * 109.47000 * 180.02562 * 13 12 11 16 16 C 1.35696 * 117.00189 * 90.00052 * 15 13 12 17 17 N 1.32223 * 119.69218 * 359.72765 * 16 15 13 18 18 C 1.31977 * 121.65903 * 179.71435 * 17 16 15 19 19 C 1.38037 * 120.86341 * 0.56072 * 18 17 16 20 20 C 1.38837 * 119.29354 * 359.72387 * 19 18 17 21 21 C 1.38459 * 118.47416 * 0.02562 * 20 19 18 22 22 Cl 1.73606 * 120.45042 * 179.97438 * 21 20 19 23 23 C 1.52997 * 109.47127 * 59.99836 * 13 12 11 24 24 C 1.52996 * 109.46998 * 204.99645 * 9 8 7 25 25 C 1.39344 * 120.56854 * 0.25859 * 7 6 5 26 26 F 1.35092 * 120.47512 * 179.71722 * 25 7 6 27 27 C 1.38446 * 119.05088 * 359.49446 * 25 7 6 28 28 H 0.96697 * 114.00304 * 59.99627 * 1 2 3 29 29 H 1.08995 * 109.47014 * 120.00535 * 2 1 3 30 30 H 1.48502 * 110.00273 * 298.68361 * 3 2 1 31 31 H 1.48504 * 110.00047 * 60.00571 * 3 2 1 32 32 H 1.07992 * 119.54740 * 359.97438 * 5 4 2 33 33 H 0.97001 * 120.00516 * 180.02562 * 8 7 6 34 34 H 1.09002 * 109.47097 * 299.99818 * 11 9 8 35 35 H 1.09001 * 109.47142 * 59.99782 * 11 9 8 36 36 H 1.09001 * 109.47375 * 59.99908 * 12 11 9 37 37 H 1.09000 * 109.47140 * 179.97438 * 12 11 9 38 38 H 1.08002 * 119.57196 * 180.28446 * 18 17 16 39 39 H 1.07996 * 120.35232 * 179.75258 * 19 18 17 40 40 H 1.08001 * 120.75980 * 179.97438 * 20 19 18 41 41 H 1.09002 * 109.47153 * 180.02562 * 23 13 12 42 42 H 1.09001 * 109.46832 * 60.00321 * 23 13 12 43 43 H 1.09004 * 109.47368 * 60.00227 * 24 9 8 44 44 H 1.09001 * 109.47372 * 300.00383 * 24 9 8 45 45 H 1.08001 * 120.75319 * 180.23941 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7250 -0.0462 -2.1433 6 7 3.1715 -0.6576 -3.2247 7 6 2.8797 -1.9235 -3.4771 8 7 3.3716 -2.5281 -4.6297 9 6 4.2092 -1.7638 -5.5574 10 1 3.8698 -0.7285 -5.5847 11 6 5.6646 -1.8112 -5.0879 12 6 6.5392 -1.0125 -6.0563 13 6 6.4351 -1.6198 -7.4569 14 1 6.7748 -2.6552 -7.4300 15 8 7.2525 -0.8742 -8.3613 16 6 8.5395 -1.2793 -8.5056 17 7 8.9799 -2.3189 -7.8175 18 6 10.2223 -2.7494 -7.9320 19 6 11.1161 -2.1171 -8.7727 20 6 10.6951 -1.0180 -9.5090 21 6 9.3844 -0.5937 -9.3709 22 17 8.8039 0.7755 -10.2666 23 6 4.9798 -1.5725 -7.9264 24 6 4.1051 -2.3718 -6.9576 25 6 2.0792 -2.6544 -2.6015 26 9 1.7778 -3.9449 -2.8639 27 6 1.6010 -2.0405 -1.4564 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 0.8899 30 1 1.5879 2.4586 -1.2242 31 1 1.5617 2.4679 1.2086 32 1 2.9843 0.9877 -1.9705 33 1 3.1600 -3.4557 -4.8190 34 1 5.7388 -1.3782 -4.0903 35 1 6.0040 -2.8467 -5.0606 36 1 6.1996 0.0229 -6.0832 37 1 7.5760 -1.0459 -5.7216 38 1 10.5451 -3.6049 -7.3572 39 1 12.1319 -2.4740 -8.8571 40 1 11.3747 -0.5052 -10.1736 41 1 4.9056 -2.0056 -8.9240 42 1 4.6402 -0.5371 -7.9532 43 1 3.0682 -2.3381 -7.2922 44 1 4.4445 -3.4072 -6.9303 45 1 0.9816 -2.5823 -0.7570 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12496378_17656566.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:21:55 Heat of formation + Delta-G solvation = -37.840772 kcal Electronic energy + Delta-G solvation = -31841.105387 eV Core-core repulsion = 27186.950426 eV Total energy + Delta-G solvation = -4654.154960 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.109 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -49.85546 -41.87715 -41.44158 -40.15968 -38.65738 -37.85896 -37.52780 -35.65053 -33.44203 -33.24302 -32.10590 -31.94636 -31.21229 -29.33677 -26.48692 -25.38522 -24.75655 -24.36639 -23.82502 -23.06061 -22.46446 -21.15318 -19.62672 -19.27690 -18.54507 -18.33733 -18.20179 -17.61418 -17.41645 -16.98036 -16.81756 -16.57719 -16.19251 -16.02856 -15.96064 -15.74907 -15.45481 -15.21590 -15.05369 -14.59077 -14.38902 -14.34835 -14.28414 -14.00855 -13.87439 -13.46450 -13.43704 -13.33864 -13.10004 -12.96354 -12.77483 -12.61280 -12.26239 -12.18106 -12.07690 -12.03195 -11.70064 -11.33498 -11.11543 -10.80667 -10.76336 -10.72861 -10.59530 -10.52379 -9.46362 -8.76494 -5.01072 -0.13708 -0.05573 0.08728 0.13377 1.09605 1.22031 1.54718 1.77056 1.92686 2.00090 2.55731 2.56468 3.04666 3.17121 3.25928 3.34294 3.54215 3.56269 3.56736 3.67360 3.78740 3.84198 3.90745 3.94232 4.00343 4.07947 4.12639 4.19873 4.30112 4.34420 4.37299 4.44500 4.46762 4.65598 4.69467 4.70134 4.73668 4.86651 4.91114 4.93893 4.98210 5.02390 5.10660 5.14690 5.22804 5.31097 5.43540 5.95609 6.14702 6.17839 6.35204 6.64566 6.96595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.061 4.061 3 Si 0.681 3.319 4 C -0.209 4.209 5 C 0.148 3.852 6 N -0.511 5.511 7 C 0.393 3.607 8 N -0.713 5.713 9 C 0.154 3.846 10 H 0.095 0.905 11 C -0.122 4.122 12 C -0.129 4.129 13 C 0.089 3.911 14 H 0.092 0.908 15 O -0.288 6.288 16 C 0.338 3.662 17 N -0.526 5.526 18 C 0.145 3.855 19 C -0.201 4.201 20 C -0.032 4.032 21 C -0.114 4.114 22 Cl -0.042 7.042 23 C -0.112 4.112 24 C -0.124 4.124 25 C -0.021 4.021 26 F -0.134 7.134 27 C -0.038 4.038 28 H 0.376 0.624 29 H 0.120 0.880 30 H -0.256 1.256 31 H -0.254 1.254 32 H 0.163 0.837 33 H 0.412 0.588 34 H 0.076 0.924 35 H 0.065 0.935 36 H 0.074 0.926 37 H 0.071 0.929 38 H 0.167 0.833 39 H 0.148 0.852 40 H 0.152 0.848 41 H 0.078 0.922 42 H 0.079 0.921 43 H 0.079 0.921 44 H 0.072 0.928 45 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.044 -1.081 -0.387 4.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.582 3.418 4 C -0.214 4.214 5 C -0.009 4.009 6 N -0.228 5.228 7 C 0.154 3.846 8 N -0.345 5.345 9 C 0.050 3.950 10 H 0.113 0.887 11 C -0.161 4.161 12 C -0.168 4.168 13 C 0.033 3.967 14 H 0.110 0.890 15 O -0.194 6.194 16 C 0.158 3.842 17 N -0.250 5.250 18 C -0.011 4.011 19 C -0.221 4.221 20 C -0.058 4.058 21 C -0.144 4.144 22 Cl -0.013 7.013 23 C -0.150 4.150 24 C -0.162 4.162 25 C -0.048 4.048 26 F -0.113 7.113 27 C -0.064 4.064 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.181 1.181 31 H -0.179 1.179 32 H 0.180 0.820 33 H 0.249 0.751 34 H 0.094 0.906 35 H 0.084 0.916 36 H 0.093 0.907 37 H 0.090 0.910 38 H 0.184 0.816 39 H 0.165 0.835 40 H 0.169 0.831 41 H 0.096 0.904 42 H 0.098 0.902 43 H 0.098 0.902 44 H 0.091 0.909 45 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.731 -0.118 -0.207 3.738 hybrid contribution -1.108 -0.944 -0.542 1.553 sum 2.623 -1.062 -0.749 2.927 Atomic orbital electron populations 1.86609 1.17714 1.79925 1.49382 1.24821 0.83887 1.10757 0.97700 0.95136 0.91578 0.74314 0.80788 1.20862 1.04926 0.95128 1.00515 1.22343 0.91607 0.99151 0.87791 1.67321 1.26473 1.07320 1.21637 1.18431 0.89892 0.89049 0.87217 1.44661 1.54491 1.14657 1.20722 1.21041 0.89898 0.96938 0.87144 0.88653 1.21862 0.93905 1.00796 0.99574 1.21889 1.00892 1.00489 0.93506 1.22502 0.89447 0.96785 0.87977 0.89003 1.86369 1.17151 1.54452 1.61478 1.19504 0.85832 0.89036 0.89819 1.67474 1.18612 1.13807 1.25118 1.22601 0.86917 0.97416 0.94172 1.22050 1.02375 0.97804 0.99893 1.21471 0.92766 0.94873 0.96679 1.20944 0.94758 0.96483 1.02185 1.98399 1.88749 1.40987 1.73152 1.21539 0.91873 1.02173 0.99401 1.21773 1.00785 1.00042 0.93573 1.18007 1.06890 0.81029 0.98830 1.91490 1.92100 1.33752 1.93926 1.21276 0.96231 0.94272 0.94620 0.77583 0.86222 1.18066 1.17851 0.82048 0.75133 0.90580 0.91586 0.90730 0.91024 0.81555 0.83455 0.83057 0.90362 0.90242 0.90225 0.90929 0.83336 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.26 12.78 -35.23 -0.45 -0.71 16 2 C -0.06 0.07 2.84 36.01 0.10 0.17 16 3 Si 0.68 -1.22 29.82 -169.99 -5.07 -6.29 16 4 C -0.21 0.07 5.40 -104.47 -0.56 -0.49 16 5 C 0.15 -0.02 9.84 -17.57 -0.17 -0.19 16 6 N -0.51 -0.71 9.20 -12.37 -0.11 -0.83 16 7 C 0.39 0.53 7.47 -154.86 -1.16 -0.63 16 8 N -0.71 0.16 5.23 -53.85 -0.28 -0.13 16 9 C 0.15 -0.12 2.47 -67.93 -0.17 -0.29 16 10 H 0.10 0.04 7.54 -51.93 -0.39 -0.35 16 11 C -0.12 0.06 5.51 -26.73 -0.15 -0.09 16 12 C -0.13 -0.01 5.54 -26.73 -0.15 -0.16 16 13 C 0.09 0.03 2.38 -26.73 -0.06 -0.03 16 14 H 0.09 0.08 6.99 -51.93 -0.36 -0.29 16 15 O -0.29 -0.68 9.24 -18.79 -0.17 -0.85 16 16 C 0.34 0.79 7.45 -17.09 -0.13 0.66 16 17 N -0.53 -0.80 8.65 -13.30 -0.12 -0.92 16 18 C 0.14 -0.12 11.17 -17.56 -0.20 -0.31 16 19 C -0.20 0.34 10.11 -39.43 -0.40 -0.05 16 20 C -0.03 0.02 9.97 -39.28 -0.39 -0.37 16 21 C -0.11 -0.19 6.36 -39.21 -0.25 -0.44 16 22 Cl -0.04 -0.08 28.54 -51.86 -1.48 -1.56 16 23 C -0.11 0.11 5.58 -26.71 -0.15 -0.04 16 24 C -0.12 0.24 5.39 -26.71 -0.14 0.09 16 25 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 26 F -0.13 -0.29 16.65 2.25 0.04 -0.25 16 27 C -0.04 -0.02 9.75 -39.26 -0.38 -0.41 16 28 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 29 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 30 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 31 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 32 H 0.16 -0.36 4.88 -52.49 -0.26 -0.62 16 33 H 0.41 -0.51 8.07 -40.82 -0.33 -0.84 16 34 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 38 H 0.17 -0.60 8.06 -52.49 -0.42 -1.02 16 39 H 0.15 -0.64 8.06 -52.49 -0.42 -1.06 16 40 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 41 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 44 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 45 H 0.15 -0.03 8.06 -52.49 -0.42 -0.45 16 LS Contribution 390.39 15.07 5.88 5.88 Total: 0.00 -6.40 390.39 -12.03 -18.43 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -5.63 Total: -9.88 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -4.64 Total: -2.90 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -0.51 Total: -1.87 kcal Atomic # 8 Polarization: -0.93 SS G_CDS: -0.62 Total: -1.56 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.07 Total: -6.29 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.48 Total: -1.56 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -6.40 -12.03 -18.43 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12496378_17656566.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.411 kcal (2) G-P(sol) polarization free energy of solvation -6.396 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.430 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds