Wall clock time and date at job start Tue Mar 9 2021 13:24:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47148 * 2 1 4 4 C 1.50700 * 109.47499 * 240.00103 * 2 1 3 5 5 C 1.37977 * 120.32808 * 119.99528 * 4 2 1 6 6 N 1.32009 * 120.89978 * 179.72404 * 5 4 2 7 7 C 1.32337 * 121.64748 * 0.25526 * 6 5 4 8 8 N 1.39148 * 119.71722 * 180.02562 * 7 6 5 9 9 C 1.46491 * 119.99997 * 0.02562 * 8 7 6 10 10 C 1.53008 * 109.47147 * 179.97438 * 9 8 7 11 11 H 1.09004 * 112.84639 * 43.79902 * 10 9 8 12 12 C 1.53780 * 113.61496 * 174.99632 * 10 9 8 13 13 C 1.53785 * 87.07947 * 139.98252 * 12 10 9 14 14 H 1.09002 * 113.61185 * 220.02123 * 13 12 10 15 15 O 1.42890 * 113.61795 * 89.19777 * 13 12 10 16 16 C 1.53778 * 113.61150 * 272.49369 * 10 9 8 17 17 C 1.39343 * 120.56594 * 0.02562 * 7 6 5 18 18 F 1.35092 * 120.47397 * 180.02562 * 17 7 6 19 19 C 1.38444 * 119.05350 * 359.97438 * 17 7 6 20 20 H 0.96699 * 114.00301 * 300.00395 * 1 2 3 21 21 H 1.09006 * 109.47199 * 119.99794 * 2 1 3 22 22 H 1.48500 * 110.00309 * 178.67758 * 3 2 1 23 23 H 1.48496 * 110.00052 * 299.99728 * 3 2 1 24 24 H 1.08002 * 119.55297 * 0.02562 * 5 4 2 25 25 H 0.96999 * 119.99756 * 180.02562 * 8 7 6 26 26 H 1.09002 * 109.47044 * 299.99129 * 9 8 7 27 27 H 1.09000 * 109.47721 * 59.99752 * 9 8 7 28 28 H 1.08995 * 113.61215 * 254.52483 * 12 10 9 29 29 H 1.08998 * 113.61236 * 25.34908 * 12 10 9 30 30 H 0.96698 * 114.00430 * 179.97438 * 15 13 12 31 31 H 1.08998 * 113.61696 * 334.57139 * 16 10 9 32 32 H 1.09005 * 113.61464 * 105.47076 * 16 10 9 33 33 H 1.08004 * 120.76039 * 179.97438 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7250 -0.0463 -2.1431 6 7 3.1757 -0.6591 -3.2219 7 6 2.8838 -1.9249 -3.4745 8 7 3.3811 -2.5314 -4.6239 9 6 4.2244 -1.7692 -5.5480 10 6 4.6344 -2.6634 -6.7199 11 1 3.8081 -3.2602 -7.1062 12 6 5.4235 -1.9233 -7.8128 13 6 6.3084 -3.1771 -7.9127 14 1 7.3678 -2.9548 -8.0407 15 8 5.8274 -4.1442 -8.8481 16 6 5.9133 -3.4758 -6.4568 17 6 2.0827 -2.6556 -2.5993 18 9 1.7862 -3.9478 -2.8587 19 6 1.5957 -2.0387 -1.4596 20 1 -0.3934 0.4417 0.7650 21 1 1.7923 -0.5138 0.8900 22 1 3.5345 1.7703 0.0322 23 1 1.5615 2.4678 -1.2085 24 1 2.9850 0.9876 -1.9701 25 1 3.1694 -3.4589 -4.8132 26 1 3.6680 -0.9103 -5.9233 27 1 5.1165 -1.4241 -5.0253 28 1 4.8422 -1.7264 -8.7135 29 1 5.9519 -1.0422 -7.4489 30 1 6.3799 -4.9349 -8.9157 31 1 6.5767 -3.0200 -5.7219 32 1 5.7273 -4.5322 -6.2628 33 1 0.9720 -2.5789 -0.7627 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12857622_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:35 Heat of formation + Delta-G solvation = -51.687692 kcal Electronic energy + Delta-G solvation = -18548.003353 eV Core-core repulsion = 15297.991068 eV Total energy + Delta-G solvation = -3250.012285 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -49.84252 -41.39534 -40.56369 -38.09173 -36.95454 -35.49307 -33.27583 -31.87201 -28.81475 -26.84726 -26.17454 -25.00777 -23.24323 -22.69354 -20.79922 -19.34219 -18.58954 -18.23618 -18.05726 -17.95868 -16.91739 -16.66383 -16.48671 -15.97649 -15.61548 -15.47001 -15.12653 -14.96617 -14.34728 -14.31238 -13.97958 -13.88858 -13.80863 -13.46161 -13.06291 -12.57220 -12.18978 -12.06972 -11.95495 -11.44723 -11.15566 -10.81138 -10.70891 -10.65458 -10.32331 -8.72480 -5.03793 -0.06355 0.15594 1.21727 1.59454 1.90759 1.98051 2.54988 2.98651 3.06836 3.19858 3.33734 3.48080 3.52786 3.64103 3.66831 3.83175 3.89139 4.12192 4.23263 4.27725 4.37443 4.51966 4.59638 4.66273 4.68457 4.74705 4.77877 4.94826 4.99066 5.08801 5.25940 5.39204 5.95827 6.18314 6.57355 6.59445 6.96698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.682 3.318 4 C -0.165 4.165 5 C 0.142 3.858 6 N -0.512 5.512 7 C 0.389 3.611 8 N -0.715 5.715 9 C 0.141 3.859 10 C -0.120 4.120 11 H 0.100 0.900 12 C -0.123 4.123 13 C 0.078 3.922 14 H 0.070 0.930 15 O -0.552 6.552 16 C -0.168 4.168 17 C -0.019 4.019 18 F -0.132 7.132 19 C -0.034 4.034 20 H 0.384 0.616 21 H 0.076 0.924 22 H -0.251 1.251 23 H -0.247 1.247 24 H 0.154 0.846 25 H 0.413 0.587 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.081 0.919 29 H 0.098 0.902 30 H 0.383 0.617 31 H 0.091 0.909 32 H 0.073 0.927 33 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.700 1.219 3.370 3.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.170 4.170 3 Si 0.583 3.417 4 C -0.170 4.170 5 C -0.015 4.015 6 N -0.229 5.229 7 C 0.150 3.850 8 N -0.348 5.348 9 C 0.017 3.983 10 C -0.138 4.138 11 H 0.118 0.882 12 C -0.161 4.161 13 C 0.018 3.982 14 H 0.088 0.912 15 O -0.357 6.357 16 C -0.205 4.205 17 C -0.045 4.045 18 F -0.111 7.111 19 C -0.060 4.060 20 H 0.231 0.769 21 H 0.094 0.906 22 H -0.176 1.176 23 H -0.172 1.172 24 H 0.171 0.829 25 H 0.250 0.750 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.099 0.901 29 H 0.117 0.883 30 H 0.231 0.769 31 H 0.109 0.891 32 H 0.092 0.908 33 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.454 2.464 1.553 3.809 hybrid contribution -0.205 -2.053 0.448 2.111 sum 2.249 0.411 2.002 3.039 Atomic orbital electron populations 1.86492 1.17208 1.81843 1.49800 1.24464 0.85727 1.10209 0.96605 0.95132 0.80851 0.77946 0.87806 1.19931 1.03765 0.94502 0.98849 1.22116 0.92776 0.98555 0.88024 1.67276 1.26673 1.07547 1.21445 1.18432 0.90221 0.88981 0.87329 1.44564 1.54453 1.14745 1.21075 1.21381 0.94227 0.94035 0.88616 1.22765 0.97713 0.97924 0.95439 0.88222 1.23008 0.97974 0.96143 0.98942 1.22668 0.96894 0.90369 0.88252 0.91187 1.86462 1.54913 1.32301 1.62063 1.23749 0.97671 1.01239 0.97870 1.17976 1.06721 0.80956 0.98884 1.91489 1.92220 1.33433 1.93976 1.21252 0.95821 0.94183 0.94772 0.76851 0.90580 1.17603 1.17159 0.82941 0.74981 0.91291 0.91298 0.90061 0.88312 0.76921 0.89079 0.90780 0.83086 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.19 12.75 -35.23 -0.45 -0.26 16 2 C -0.06 0.04 2.83 36.01 0.10 0.14 16 3 Si 0.68 -1.19 29.82 -169.99 -5.07 -6.25 16 4 C -0.17 -0.37 5.43 -104.47 -0.57 -0.94 16 5 C 0.14 0.45 9.84 -17.57 -0.17 0.28 16 6 N -0.51 -2.17 9.57 -12.37 -0.12 -2.29 16 7 C 0.39 1.40 7.49 -154.85 -1.16 0.24 16 8 N -0.72 -1.21 5.71 -60.34 -0.34 -1.55 16 9 C 0.14 0.09 5.53 -4.04 -0.02 0.07 16 10 C -0.12 0.05 3.69 -89.81 -0.33 -0.29 16 11 H 0.10 0.05 8.14 -51.93 -0.42 -0.38 16 12 C -0.12 0.07 7.47 -25.92 -0.19 -0.12 16 13 C 0.08 -0.05 5.27 -25.92 -0.14 -0.19 16 14 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 15 O -0.55 -0.29 13.59 -35.23 -0.48 -0.77 16 16 C -0.17 0.17 7.47 -25.92 -0.19 -0.02 16 17 C -0.02 -0.06 7.35 -39.09 -0.29 -0.35 16 18 F -0.13 -0.46 16.65 2.25 0.04 -0.42 16 19 C -0.03 -0.09 9.75 -39.26 -0.38 -0.47 16 20 H 0.38 -2.08 8.74 45.56 0.40 -1.68 16 21 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 22 H -0.25 -0.13 7.11 56.52 0.40 0.28 16 23 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 24 H 0.15 0.29 4.88 -52.49 -0.26 0.04 16 25 H 0.41 0.25 7.94 -40.82 -0.32 -0.07 16 26 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 27 H 0.07 0.06 7.84 -51.93 -0.41 -0.35 16 28 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.10 -0.17 8.10 -51.93 -0.42 -0.60 16 30 H 0.38 -1.32 9.12 45.56 0.42 -0.91 16 31 H 0.09 -0.12 7.89 -51.93 -0.41 -0.53 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.15 0.14 8.06 -52.48 -0.42 -0.28 16 LS Contribution 285.66 15.07 4.30 4.30 Total: 0.00 -7.07 285.66 -8.61 -15.69 By element: Atomic # 1 Polarization: -3.64 SS G_CDS: -3.15 Total: -6.79 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -3.35 Total: -1.66 kcal Atomic # 7 Polarization: -3.38 SS G_CDS: -0.46 Total: -3.84 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -0.93 Total: -1.03 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.07 Total: -6.25 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -7.07 -8.61 -15.69 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12857622_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.999 kcal (2) G-P(sol) polarization free energy of solvation -7.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.073 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.689 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds