Wall clock time and date at job start Tue Mar 9 2021 13:44:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99579 * 2 1 4 4 O 1.20819 * 120.00672 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99682 * 179.97438 * 3 2 1 6 6 H 1.09002 * 109.47152 * 59.99843 * 5 3 2 7 7 C 1.53005 * 109.47304 * 179.97438 * 5 3 2 8 8 C 1.52997 * 109.47452 * 180.02562 * 7 5 3 9 9 C 1.53002 * 109.46817 * 300.00239 * 8 7 5 10 10 H 1.09004 * 109.46733 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47037 * 299.99555 * 9 8 7 12 12 C 1.39142 * 120.00458 * 275.00247 * 11 9 8 13 13 N 1.32337 * 119.71506 * 0.02562 * 12 11 9 14 14 C 1.32007 * 121.64918 * 179.97438 * 13 12 11 15 15 C 1.37986 * 120.89907 * 359.97438 * 14 13 12 16 16 C 1.50696 * 120.33047 * 180.02562 * 15 14 13 17 17 O 1.42899 * 109.47236 * 120.00237 * 16 15 14 18 18 Si 1.86300 * 109.46949 * 0.02562 * 16 15 14 19 19 C 1.38912 * 119.34700 * 0.02562 * 15 14 13 20 20 C 1.38443 * 118.48061 * 359.74617 * 19 15 14 21 21 F 1.35101 * 120.47230 * 180.27019 * 20 19 15 22 22 C 1.53000 * 109.47233 * 60.00194 * 9 8 7 23 23 C 1.52997 * 109.47060 * 299.99657 * 22 9 8 24 24 H 1.09001 * 109.46940 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46952 * 300.00275 * 1 2 3 26 26 H 1.09000 * 109.47246 * 60.00167 * 1 2 3 27 27 H 1.09002 * 109.46935 * 59.99966 * 7 5 3 28 28 H 1.09001 * 109.46812 * 300.00308 * 7 5 3 29 29 H 1.08993 * 109.47194 * 179.97438 * 8 7 5 30 30 H 1.09002 * 109.46695 * 59.99734 * 8 7 5 31 31 H 0.97001 * 119.99395 * 95.00922 * 11 9 8 32 32 H 1.07999 * 119.55210 * 179.97438 * 14 13 12 33 33 H 1.09004 * 109.47374 * 240.00499 * 16 15 14 34 34 H 0.96701 * 114.00195 * 300.00109 * 17 16 15 35 35 H 1.48497 * 110.00295 * 179.97438 * 18 16 15 36 36 H 1.48501 * 110.00234 * 301.32339 * 18 16 15 37 37 H 1.07994 * 120.76127 * 179.97438 * 19 15 14 38 38 H 1.09002 * 109.47398 * 59.99826 * 22 9 8 39 39 H 1.09001 * 109.47194 * 180.02562 * 22 9 8 40 40 H 1.08996 * 109.47853 * 180.02562 * 23 22 9 41 41 H 1.09002 * 109.47153 * 300.00319 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7806 -0.8891 7 6 4.0001 2.7422 -0.0002 8 6 5.5280 2.8223 -0.0002 9 6 6.0750 2.1294 1.2494 10 1 7.1636 2.1861 1.2491 11 7 5.5513 2.7941 2.4452 12 6 6.1919 3.9205 2.9520 13 7 7.2737 4.3868 2.3491 14 6 7.9110 5.4526 2.7968 15 6 7.4682 6.1241 3.9180 16 6 8.2054 7.3398 4.4176 17 8 7.3271 8.4671 4.4073 18 14 9.6644 7.6800 3.3102 19 6 6.3362 5.6684 4.5817 20 6 5.6855 4.5512 4.0866 21 9 4.5778 4.0768 4.6973 22 6 5.6413 0.6621 1.2501 23 6 4.1134 0.5820 1.2501 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 3.6100 3.2369 0.8893 28 1 3.6107 3.2357 -0.8907 29 1 5.8370 3.8675 -0.0012 30 1 5.9177 2.3277 -0.8900 31 1 4.7578 2.4489 2.8836 32 1 8.7910 5.8039 2.2786 33 1 8.5546 7.1606 5.4345 34 1 6.9771 8.6850 3.5326 35 1 10.3995 8.8770 3.7918 36 1 10.5695 6.5029 3.2866 37 1 5.9699 6.1763 5.4616 38 1 6.0311 0.1675 0.3603 39 1 6.0306 0.1685 2.1405 40 1 3.8043 -0.4632 1.2511 41 1 3.7237 1.0765 2.1398 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14474852_17656566.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:33 Heat of formation + Delta-G solvation = -122.252235 kcal Electronic energy + Delta-G solvation = -26376.007136 eV Core-core repulsion = 22364.951372 eV Total energy + Delta-G solvation = -4011.055764 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.137 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.83461 -41.86632 -41.35527 -39.85662 -37.95183 -37.44095 -35.66542 -33.21936 -32.38046 -31.99337 -30.46087 -28.63262 -26.49787 -25.38943 -24.36040 -23.82433 -22.99596 -21.77103 -20.51717 -19.49521 -18.60185 -18.41251 -18.13609 -17.78706 -17.57519 -17.30214 -16.96250 -16.42213 -16.10340 -15.95221 -15.90848 -15.36961 -15.19228 -14.93168 -14.64337 -14.34816 -14.23260 -14.04502 -13.88680 -13.64733 -13.51083 -13.35547 -13.16857 -12.99268 -12.60552 -12.45201 -12.09759 -12.03415 -11.82202 -11.74735 -11.58139 -11.23044 -11.08529 -10.64814 -10.62894 -10.44616 -8.73649 -5.08771 -0.03955 0.15258 1.19956 1.23102 1.57540 1.70114 1.93242 1.98074 2.58670 3.07587 3.27132 3.40545 3.42284 3.52657 3.57101 3.60373 3.82869 3.86661 4.00424 4.03007 4.06387 4.15958 4.22607 4.25770 4.27756 4.32961 4.42254 4.44775 4.58094 4.60902 4.65765 4.73482 4.86583 4.91123 4.92149 4.99995 5.08411 5.18386 5.23327 5.39302 5.44029 5.98584 6.18585 6.53186 6.74692 6.97165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.359 6.359 3 C 0.461 3.539 4 O -0.503 6.503 5 C -0.079 4.079 6 H 0.113 0.887 7 C -0.104 4.104 8 C -0.129 4.129 9 C 0.154 3.846 10 H 0.097 0.903 11 N -0.710 5.710 12 C 0.393 3.607 13 N -0.511 5.511 14 C 0.147 3.853 15 C -0.211 4.211 16 C -0.055 4.055 17 O -0.541 6.541 18 Si 0.686 3.314 19 C -0.037 4.037 20 C -0.022 4.022 21 F -0.134 7.134 22 C -0.127 4.127 23 C -0.113 4.113 24 H 0.103 0.897 25 H 0.063 0.937 26 H 0.064 0.936 27 H 0.071 0.929 28 H 0.073 0.927 29 H 0.078 0.922 30 H 0.076 0.924 31 H 0.410 0.590 32 H 0.162 0.838 33 H 0.115 0.885 34 H 0.380 0.620 35 H -0.252 1.252 36 H -0.254 1.254 37 H 0.148 0.852 38 H 0.087 0.913 39 H 0.077 0.923 40 H 0.084 0.916 41 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.450 -2.483 -2.962 4.129 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.304 3.696 4 O -0.390 6.390 5 C -0.098 4.098 6 H 0.130 0.870 7 C -0.141 4.141 8 C -0.167 4.167 9 C 0.049 3.951 10 H 0.115 0.885 11 N -0.344 5.344 12 C 0.154 3.846 13 N -0.228 5.228 14 C -0.010 4.010 15 C -0.217 4.217 16 C -0.166 4.166 17 O -0.346 6.346 18 Si 0.588 3.412 19 C -0.064 4.064 20 C -0.048 4.048 21 F -0.113 7.113 22 C -0.165 4.165 23 C -0.151 4.151 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.090 0.910 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.248 0.752 32 H 0.179 0.821 33 H 0.132 0.868 34 H 0.227 0.773 35 H -0.177 1.177 36 H -0.179 1.179 37 H 0.166 0.834 38 H 0.106 0.894 39 H 0.096 0.904 40 H 0.103 0.897 41 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 2.561 -2.677 -3.268 4.941 hybrid contribution -1.476 -0.054 1.570 2.155 sum 1.085 -2.731 -1.699 3.394 Atomic orbital electron populations 1.23311 0.76016 1.03951 1.02698 1.86505 1.23670 1.33411 1.83944 1.23859 0.92106 0.81402 0.72247 1.90693 1.67189 1.36392 1.44761 1.21161 0.86818 0.99814 1.02011 0.86958 1.21428 0.95986 0.92856 1.03857 1.21963 0.94542 1.02423 0.97822 1.20989 0.99599 0.90753 0.83710 0.88487 1.44761 1.31311 1.27733 1.30632 1.18428 0.89750 0.88173 0.88231 1.67297 1.08020 1.15204 1.32237 1.22335 0.97032 0.89566 0.92059 1.20919 0.99584 1.01755 0.99399 1.24856 1.00554 0.84125 1.07106 1.86509 1.65802 1.46704 1.35590 0.94818 0.77286 0.81305 0.87792 1.21268 0.93394 0.92523 0.99187 1.18021 0.90016 0.99639 0.97148 1.91492 1.49845 1.87795 1.82203 1.21872 0.95019 0.95571 1.04058 1.21536 0.96038 1.01626 0.95901 0.87871 0.91807 0.91770 0.90994 0.90810 0.90375 0.90508 0.75176 0.82097 0.86773 0.77287 1.17663 1.17870 0.83392 0.89426 0.90398 0.89744 0.91682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.42 10.47 -39.25 -0.41 -0.84 16 3 C 0.46 0.83 7.26 36.01 0.26 1.09 16 4 O -0.50 -2.51 15.73 -18.74 -0.29 -2.81 16 5 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 6 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 7 C -0.10 0.05 4.34 -26.73 -0.12 -0.07 16 8 C -0.13 0.22 5.62 -26.73 -0.15 0.07 16 9 C 0.15 -0.27 2.80 -67.93 -0.19 -0.46 16 10 H 0.10 -0.10 7.54 -51.93 -0.39 -0.49 16 11 N -0.71 0.26 4.38 -53.85 -0.24 0.02 16 12 C 0.39 0.49 7.47 -154.86 -1.16 -0.66 16 13 N -0.51 -0.52 9.20 -12.37 -0.11 -0.63 16 14 C 0.15 -0.05 9.84 -17.57 -0.17 -0.23 16 15 C -0.21 0.07 5.40 -104.47 -0.56 -0.50 16 16 C -0.05 0.06 2.84 36.00 0.10 0.16 16 17 O -0.54 0.21 12.78 -35.23 -0.45 -0.24 16 18 Si 0.69 -1.37 29.82 -169.99 -5.07 -6.44 16 19 C -0.04 -0.03 9.75 -39.26 -0.38 -0.41 16 20 C -0.02 -0.04 7.35 -39.10 -0.29 -0.33 16 21 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 22 C -0.13 0.41 5.61 -26.73 -0.15 0.26 16 23 C -0.11 0.27 4.96 -26.73 -0.13 0.14 16 24 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.07 0.09 7.56 -51.93 -0.39 -0.30 16 28 H 0.07 0.03 8.10 -51.93 -0.42 -0.39 16 29 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.41 -0.26 6.34 -40.82 -0.26 -0.52 16 32 H 0.16 -0.42 4.88 -52.49 -0.26 -0.68 16 33 H 0.11 -0.08 7.96 -51.93 -0.41 -0.49 16 34 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 35 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 36 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 37 H 0.15 0.03 8.06 -52.49 -0.42 -0.40 16 38 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 39 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 40 H 0.08 -0.22 8.11 -51.93 -0.42 -0.64 16 41 H 0.06 -0.12 6.51 -51.93 -0.34 -0.46 16 LS Contribution 338.52 15.07 5.10 5.10 Total: 0.00 -7.14 338.52 -9.05 -16.18 By element: Atomic # 1 Polarization: -4.49 SS G_CDS: -5.50 Total: -9.99 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.11 Total: -0.04 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -0.35 Total: -0.61 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -1.16 Total: -3.88 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.07 Total: -6.44 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -7.14 -9.05 -16.18 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14474852_17656566.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.068 kcal (2) G-P(sol) polarization free energy of solvation -7.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.206 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds