Wall clock time and date at job start Tue Mar 9 2021 13:44:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99579 * 2 1 4 4 O 1.20819 * 120.00672 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99682 * 179.97438 * 3 2 1 6 6 H 1.09002 * 109.47152 * 59.99843 * 5 3 2 7 7 C 1.53005 * 109.47304 * 179.97438 * 5 3 2 8 8 C 1.52997 * 109.47452 * 180.02562 * 7 5 3 9 9 C 1.53002 * 109.46817 * 300.00239 * 8 7 5 10 10 H 1.09004 * 109.46733 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47037 * 299.99555 * 9 8 7 12 12 C 1.39142 * 120.00458 * 275.00247 * 11 9 8 13 13 N 1.32337 * 119.71506 * 0.02562 * 12 11 9 14 14 C 1.32007 * 121.64918 * 179.97438 * 13 12 11 15 15 C 1.37986 * 120.89907 * 359.97438 * 14 13 12 16 16 C 1.50696 * 120.33047 * 180.02562 * 15 14 13 17 17 O 1.42899 * 109.47236 * 120.00237 * 16 15 14 18 18 Si 1.86300 * 109.46949 * 0.02562 * 16 15 14 19 19 C 1.38912 * 119.34700 * 0.02562 * 15 14 13 20 20 C 1.38443 * 118.48061 * 359.74617 * 19 15 14 21 21 F 1.35101 * 120.47230 * 180.27019 * 20 19 15 22 22 C 1.53000 * 109.47233 * 60.00194 * 9 8 7 23 23 C 1.52997 * 109.47060 * 299.99657 * 22 9 8 24 24 H 1.09001 * 109.46940 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46952 * 300.00275 * 1 2 3 26 26 H 1.09000 * 109.47246 * 60.00167 * 1 2 3 27 27 H 1.09002 * 109.46935 * 59.99966 * 7 5 3 28 28 H 1.09001 * 109.46812 * 300.00308 * 7 5 3 29 29 H 1.08993 * 109.47194 * 179.97438 * 8 7 5 30 30 H 1.09002 * 109.46695 * 59.99734 * 8 7 5 31 31 H 0.97001 * 119.99395 * 95.00922 * 11 9 8 32 32 H 1.07999 * 119.55210 * 179.97438 * 14 13 12 33 33 H 1.09004 * 109.47374 * 240.00499 * 16 15 14 34 34 H 0.96701 * 114.00195 * 300.00109 * 17 16 15 35 35 H 1.48497 * 110.00295 * 179.97438 * 18 16 15 36 36 H 1.48501 * 110.00234 * 301.32339 * 18 16 15 37 37 H 1.07994 * 120.76127 * 179.97438 * 19 15 14 38 38 H 1.09002 * 109.47398 * 59.99826 * 22 9 8 39 39 H 1.09001 * 109.47194 * 180.02562 * 22 9 8 40 40 H 1.08996 * 109.47853 * 180.02562 * 23 22 9 41 41 H 1.09002 * 109.47153 * 300.00319 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7806 -0.8891 7 6 4.0001 2.7422 -0.0002 8 6 5.5280 2.8223 -0.0002 9 6 6.0750 2.1294 1.2494 10 1 7.1636 2.1861 1.2491 11 7 5.5513 2.7941 2.4452 12 6 6.1919 3.9205 2.9520 13 7 7.2737 4.3868 2.3491 14 6 7.9110 5.4526 2.7968 15 6 7.4682 6.1241 3.9180 16 6 8.2054 7.3398 4.4176 17 8 7.3271 8.4671 4.4073 18 14 9.6644 7.6800 3.3102 19 6 6.3362 5.6684 4.5817 20 6 5.6855 4.5512 4.0866 21 9 4.5778 4.0768 4.6973 22 6 5.6413 0.6621 1.2501 23 6 4.1134 0.5820 1.2501 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 3.6100 3.2369 0.8893 28 1 3.6107 3.2357 -0.8907 29 1 5.8370 3.8675 -0.0012 30 1 5.9177 2.3277 -0.8900 31 1 4.7578 2.4489 2.8836 32 1 8.7910 5.8039 2.2786 33 1 8.5546 7.1606 5.4345 34 1 6.9771 8.6850 3.5326 35 1 10.3995 8.8770 3.7918 36 1 10.5695 6.5029 3.2866 37 1 5.9699 6.1763 5.4616 38 1 6.0311 0.1675 0.3603 39 1 6.0306 0.1685 2.1405 40 1 3.8043 -0.4632 1.2511 41 1 3.7237 1.0765 2.1398 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14474852_17656566.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:32 Heat of formation + Delta-G solvation = -118.805123 kcal Electronic energy + Delta-G solvation = -26375.857658 eV Core-core repulsion = 22364.951372 eV Total energy + Delta-G solvation = -4010.906286 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.137 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -49.96830 -41.92089 -41.39234 -39.80337 -37.91828 -37.56845 -35.64252 -33.23604 -32.35347 -31.86568 -30.42730 -28.60969 -26.46240 -25.38181 -24.36430 -23.69535 -22.99270 -21.79656 -20.43608 -19.49405 -18.68569 -18.40996 -18.16731 -17.84189 -17.60180 -17.35946 -17.04214 -16.38170 -16.05108 -15.90686 -15.86954 -15.39578 -15.14964 -14.84176 -14.65371 -14.36061 -14.28488 -14.08690 -13.86181 -13.58373 -13.47581 -13.24721 -13.11642 -12.93455 -12.55780 -12.35166 -12.11367 -12.00327 -11.88584 -11.67670 -11.59195 -11.17996 -11.04912 -10.69323 -10.63075 -10.40377 -8.73080 -4.95567 -0.07071 0.12070 1.07799 1.33319 1.67265 1.69643 2.01176 2.02317 2.56390 3.04128 3.30223 3.46708 3.50890 3.64435 3.67314 3.68662 3.86557 3.95093 4.02641 4.12507 4.15689 4.24822 4.25276 4.38360 4.40896 4.44951 4.45540 4.48462 4.65767 4.69539 4.76253 4.81441 4.97929 5.01020 5.07161 5.13208 5.15142 5.28110 5.31884 5.35735 5.45109 6.04054 6.19059 6.63636 6.78677 6.96145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.459 3.541 4 O -0.543 6.543 5 C -0.074 4.074 6 H 0.137 0.863 7 C -0.098 4.098 8 C -0.121 4.121 9 C 0.154 3.846 10 H 0.095 0.905 11 N -0.709 5.709 12 C 0.386 3.614 13 N -0.519 5.519 14 C 0.149 3.851 15 C -0.209 4.209 16 C -0.061 4.061 17 O -0.558 6.558 18 Si 0.777 3.223 19 C -0.042 4.042 20 C -0.045 4.045 21 F -0.145 7.145 22 C -0.119 4.119 23 C -0.109 4.109 24 H 0.130 0.870 25 H 0.057 0.943 26 H 0.059 0.941 27 H 0.049 0.951 28 H 0.061 0.939 29 H 0.064 0.936 30 H 0.097 0.903 31 H 0.409 0.591 32 H 0.185 0.815 33 H 0.109 0.891 34 H 0.395 0.605 35 H -0.299 1.299 36 H -0.276 1.276 37 H 0.149 0.851 38 H 0.108 0.892 39 H 0.081 0.919 40 H 0.092 0.908 41 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.394 -3.480 -3.864 5.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.276 6.276 3 C 0.304 3.696 4 O -0.433 6.433 5 C -0.092 4.092 6 H 0.154 0.846 7 C -0.136 4.136 8 C -0.159 4.159 9 C 0.050 3.950 10 H 0.113 0.887 11 N -0.342 5.342 12 C 0.147 3.853 13 N -0.236 5.236 14 C -0.008 4.008 15 C -0.214 4.214 16 C -0.171 4.171 17 O -0.365 6.365 18 Si 0.682 3.318 19 C -0.068 4.068 20 C -0.071 4.071 21 F -0.124 7.124 22 C -0.156 4.156 23 C -0.146 4.146 24 H 0.148 0.852 25 H 0.076 0.924 26 H 0.078 0.922 27 H 0.068 0.932 28 H 0.080 0.920 29 H 0.083 0.917 30 H 0.115 0.885 31 H 0.248 0.752 32 H 0.201 0.799 33 H 0.127 0.873 34 H 0.245 0.755 35 H -0.226 1.226 36 H -0.203 1.203 37 H 0.167 0.833 38 H 0.126 0.874 39 H 0.099 0.901 40 H 0.111 0.889 41 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 3.472 -3.708 -4.183 6.580 hybrid contribution -1.791 0.289 1.872 2.607 sum 1.681 -3.419 -2.311 4.456 Atomic orbital electron populations 1.23507 0.75272 1.05590 1.02243 1.86507 1.24538 1.33039 1.83557 1.24492 0.93211 0.80961 0.70918 1.90676 1.68247 1.37624 1.46772 1.21246 0.84797 0.99528 1.03660 0.84580 1.21335 0.96839 0.93233 1.02178 1.21904 0.93359 1.01909 0.98747 1.21090 0.99374 0.91590 0.82979 0.88720 1.44886 1.31102 1.27295 1.30895 1.18568 0.89952 0.88575 0.88177 1.67364 1.08088 1.15767 1.32412 1.22721 0.97270 0.88960 0.91870 1.20975 0.99192 1.01921 0.99316 1.25033 1.01001 0.83726 1.07373 1.86473 1.66044 1.46745 1.37274 0.93758 0.74508 0.77301 0.86198 1.21397 0.93754 0.92309 0.99337 1.18218 0.90345 1.00572 0.98013 1.91455 1.50460 1.88029 1.82478 1.21846 0.94113 0.94458 1.05209 1.21517 0.96639 1.01719 0.94756 0.85192 0.92386 0.92183 0.93249 0.92001 0.91746 0.88497 0.75241 0.79875 0.87323 0.75467 1.22645 1.20254 0.83291 0.87411 0.90071 0.88908 0.92675 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.36 -0.86 10.47 -51.41 -0.54 -1.40 16 3 C 0.46 1.97 7.26 71.24 0.52 2.48 16 4 O -0.54 -6.36 15.73 21.98 0.35 -6.02 16 5 C -0.07 0.20 2.63 -11.54 -0.03 0.17 16 6 H 0.14 -0.98 8.14 -2.39 -0.02 -1.00 16 7 C -0.10 0.02 4.34 30.60 0.13 0.16 16 8 C -0.12 0.45 5.62 30.59 0.17 0.62 16 9 C 0.15 -0.61 2.80 44.99 0.13 -0.49 16 10 H 0.09 -0.27 7.54 -2.39 -0.02 -0.29 16 11 N -0.71 0.04 4.38 -324.29 -1.42 -1.38 16 12 C 0.39 1.28 7.47 133.08 0.99 2.27 16 13 N -0.52 -1.07 9.20 -193.04 -1.78 -2.85 16 14 C 0.15 -0.16 9.84 84.61 0.83 0.67 16 15 C -0.21 0.10 5.40 -19.76 -0.11 -0.01 16 16 C -0.06 0.13 2.84 71.23 0.20 0.33 16 17 O -0.56 0.43 12.78 -148.98 -1.90 -1.47 16 18 Si 0.78 -3.43 29.82 68.60 2.05 -1.39 16 19 C -0.04 -0.11 9.75 22.48 0.22 0.11 16 20 C -0.05 -0.22 7.35 22.58 0.17 -0.06 16 21 F -0.15 -1.05 16.65 44.97 0.75 -0.30 16 22 C -0.12 0.92 5.61 30.59 0.17 1.09 16 23 C -0.11 0.59 4.96 30.59 0.15 0.74 16 24 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 25 H 0.06 0.03 8.13 -2.39 -0.02 0.01 16 26 H 0.06 0.01 8.13 -2.39 -0.02 -0.01 16 27 H 0.05 0.22 7.56 -2.39 -0.02 0.20 16 28 H 0.06 0.13 8.10 -2.39 -0.02 0.11 16 29 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 30 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 31 H 0.41 -0.04 6.34 -92.71 -0.59 -0.62 16 32 H 0.18 -1.19 4.88 -2.91 -0.01 -1.20 16 33 H 0.11 -0.11 7.96 -2.38 -0.02 -0.13 16 34 H 0.40 -3.39 8.70 -74.06 -0.64 -4.03 16 35 H -0.30 -1.05 7.11 99.48 0.71 -0.35 16 36 H -0.28 0.17 7.11 99.48 0.71 0.88 16 37 H 0.15 0.25 8.06 -2.91 -0.02 0.23 16 38 H 0.11 -1.21 8.14 -2.39 -0.02 -1.23 16 39 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 40 H 0.09 -0.61 8.11 -2.39 -0.02 -0.63 16 41 H 0.05 -0.17 6.51 -2.39 -0.02 -0.19 16 Total: 0.00 -18.24 338.52 2.13 -16.11 By element: Atomic # 1 Polarization: -10.44 SS G_CDS: -0.12 Total: -10.56 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: 4.74 Total: 9.26 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -3.20 Total: -4.23 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -2.10 Total: -8.89 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 0.75 Total: -0.30 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.05 Total: -1.39 kcal Total: -18.24 2.13 -16.11 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14474852_17656566.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.691 kcal (2) G-P(sol) polarization free energy of solvation -18.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.930 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.115 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds