Wall clock time and date at job start Tue Mar 9 2021 13:44:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34235 * 117.00262 * 2 1 4 4 O 1.20829 * 119.99500 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00059 * 179.97438 * 3 2 1 6 6 H 1.08996 * 109.47573 * 300.00180 * 5 3 2 7 7 C 1.53002 * 109.46938 * 60.00615 * 5 3 2 8 8 C 1.52999 * 109.47061 * 179.97438 * 7 5 3 9 9 C 1.53002 * 109.47121 * 299.99595 * 8 7 5 10 10 H 1.08996 * 109.46998 * 300.00246 * 9 8 7 11 11 N 1.46500 * 109.46954 * 180.02562 * 9 8 7 12 12 C 1.38999 * 119.99869 * 85.00205 * 11 9 8 13 13 N 1.32407 * 119.70489 * 180.26908 * 12 11 9 14 14 C 1.31968 * 121.62158 * 180.24893 * 13 12 11 15 15 C 1.38027 * 120.85911 * 359.47139 * 14 13 12 16 16 C 1.50696 * 120.33644 * 180.23663 * 15 14 13 17 17 O 1.42906 * 109.46965 * 245.00071 * 16 15 14 18 18 Si 1.86298 * 109.47352 * 5.00382 * 16 15 14 19 19 C 1.38884 * 119.32744 * 0.26587 * 15 14 13 20 20 C 1.38308 * 118.50641 * 359.97438 * 19 15 14 21 21 C 1.52993 * 109.46915 * 60.00087 * 9 8 7 22 22 C 1.53000 * 109.47492 * 300.00064 * 21 9 8 23 23 H 1.08996 * 109.46914 * 299.99709 * 1 2 3 24 24 H 1.08996 * 109.46742 * 60.00137 * 1 2 3 25 25 H 1.09003 * 109.47004 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47011 * 299.99595 * 7 5 3 27 27 H 1.08996 * 109.47343 * 59.99425 * 7 5 3 28 28 H 1.09005 * 109.47137 * 179.97438 * 8 7 5 29 29 H 1.08996 * 109.47386 * 59.99604 * 8 7 5 30 30 H 0.96998 * 120.00288 * 264.99389 * 11 9 8 31 31 H 1.08002 * 119.57383 * 179.75957 * 14 13 12 32 32 H 1.09001 * 109.47002 * 125.00774 * 16 15 14 33 33 H 0.96700 * 113.99338 * 179.97438 * 17 16 15 34 34 H 1.48496 * 110.00068 * 178.67948 * 18 16 15 35 35 H 1.48506 * 109.99840 * 300.00139 * 18 16 15 36 36 H 1.07993 * 120.74916 * 179.97438 * 19 15 14 37 37 H 1.07996 * 120.44897 * 180.02562 * 20 19 15 38 38 H 1.09004 * 109.47500 * 60.00257 * 21 9 8 39 39 H 1.09000 * 109.47104 * 180.02562 * 21 9 8 40 40 H 1.09001 * 109.47547 * 179.97438 * 22 21 9 41 41 H 1.08996 * 109.47077 * 300.00242 * 22 21 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9558 0.7809 0.8907 7 6 4.1138 0.5811 -1.2484 8 6 5.6417 0.6617 -1.2482 9 6 6.0750 2.1290 -1.2486 10 1 5.6853 2.6227 -2.1387 11 7 7.5380 2.2061 -1.2490 12 6 8.2372 2.1377 -2.4483 13 7 9.5597 2.2026 -2.4414 14 6 10.2610 2.1463 -3.5579 15 6 9.6358 2.0059 -4.7804 16 6 10.4485 1.9375 -6.0476 17 8 10.1627 3.0787 -6.8589 18 14 12.2621 1.9167 -5.6219 19 6 8.2500 1.9289 -4.8309 20 6 7.5415 1.9957 -3.6449 21 6 5.5276 2.8227 0.0003 22 6 3.9997 2.7422 0.0002 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 3.8048 -0.4642 -1.2484 27 1 3.7244 1.0750 -2.1386 28 1 6.0318 0.1670 -2.1378 29 1 6.0314 0.1680 -0.3580 30 1 8.0187 2.3050 -0.4123 31 1 11.3385 2.2062 -3.5142 32 1 10.1932 1.0299 -6.5944 33 1 10.6521 3.1010 -7.6926 34 1 13.0736 1.8173 -6.8614 35 1 12.6228 3.1492 -4.8760 36 1 7.7371 1.8193 -5.7749 37 1 6.4631 1.9385 -3.6476 38 1 5.9173 2.3291 0.8906 39 1 5.8359 3.8682 -0.0002 40 1 3.6096 3.2360 0.8902 41 1 3.6099 3.2359 -0.8900 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14475162_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:55 Heat of formation + Delta-G solvation = -78.708004 kcal Electronic energy + Delta-G solvation = -23344.425043 eV Core-core repulsion = 19804.711474 eV Total energy + Delta-G solvation = -3539.713569 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.82426 -41.31616 -39.69871 -37.95535 -37.46857 -36.01790 -33.49564 -32.38294 -31.86155 -30.48243 -28.56479 -26.34484 -24.94140 -24.38700 -23.79370 -22.46687 -21.71937 -20.99880 -18.73468 -18.54421 -18.46036 -18.12380 -17.75726 -17.41117 -16.63882 -16.36933 -15.94859 -15.58984 -15.33788 -15.14151 -14.98639 -14.87987 -14.22546 -14.10785 -14.03885 -13.85772 -13.81184 -13.76275 -13.43471 -13.06920 -12.67365 -12.59346 -12.36290 -12.21746 -11.93404 -11.82641 -11.76353 -11.57983 -11.29776 -11.01798 -10.66803 -10.53316 -10.24690 -8.65929 -4.95036 0.31503 0.49591 1.17687 1.30930 1.60312 1.66955 1.97302 2.06987 2.86109 3.37298 3.41032 3.44281 3.56942 3.66256 3.79401 3.87509 3.92095 4.01116 4.07457 4.12038 4.14656 4.15745 4.17251 4.22573 4.26965 4.35675 4.46409 4.54293 4.58724 4.62393 4.73205 4.80894 4.89298 4.91697 4.95990 5.07180 5.10102 5.16902 5.36379 5.39257 5.57416 6.04288 6.46609 6.57843 6.72155 7.22377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.109 4.109 8 C -0.134 4.134 9 C 0.151 3.849 10 H 0.085 0.915 11 N -0.719 5.719 12 C 0.409 3.591 13 N -0.539 5.539 14 C 0.158 3.842 15 C -0.189 4.189 16 C -0.060 4.060 17 O -0.538 6.538 18 Si 0.677 3.323 19 C -0.005 4.005 20 C -0.240 4.240 21 C -0.125 4.125 22 C -0.101 4.101 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.083 0.917 27 H 0.071 0.929 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.406 0.594 31 H 0.155 0.845 32 H 0.074 0.926 33 H 0.378 0.622 34 H -0.260 1.260 35 H -0.253 1.253 36 H 0.134 0.866 37 H 0.134 0.866 38 H 0.075 0.925 39 H 0.079 0.921 40 H 0.080 0.920 41 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.437 -4.532 0.036 4.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.147 4.147 8 C -0.173 4.173 9 C 0.046 3.954 10 H 0.103 0.897 11 N -0.351 5.351 12 C 0.174 3.826 13 N -0.256 5.256 14 C 0.001 3.999 15 C -0.194 4.194 16 C -0.171 4.171 17 O -0.345 6.345 18 Si 0.578 3.422 19 C -0.031 4.031 20 C -0.265 4.265 21 C -0.163 4.163 22 C -0.139 4.139 23 H 0.082 0.918 24 H 0.082 0.918 25 H 0.121 0.879 26 H 0.102 0.898 27 H 0.090 0.910 28 H 0.094 0.906 29 H 0.093 0.907 30 H 0.242 0.758 31 H 0.172 0.828 32 H 0.092 0.908 33 H 0.226 0.774 34 H -0.185 1.185 35 H -0.178 1.178 36 H 0.152 0.848 37 H 0.152 0.848 38 H 0.093 0.907 39 H 0.098 0.902 40 H 0.099 0.901 41 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.075 -3.618 1.231 3.823 hybrid contribution -0.811 0.555 -1.538 1.825 sum -0.886 -3.063 -0.307 3.204 Atomic orbital electron populations 1.23315 0.75956 1.03986 1.02709 1.86506 1.23707 1.33364 1.83894 1.23801 0.92021 0.81416 0.72196 1.90696 1.67196 1.36386 1.44881 1.21175 0.86969 0.99530 1.02343 0.86963 1.21513 0.95456 1.01688 0.96053 1.22059 0.94722 0.96728 1.03766 1.21079 0.78835 0.95836 0.99671 0.89722 1.44557 1.05199 1.79450 1.05849 1.18384 0.88134 0.89611 0.86496 1.67178 1.06077 1.21104 1.31230 1.22196 0.99118 0.92023 0.86578 1.19901 0.94757 1.10395 0.94338 1.24526 1.09919 0.90503 0.92112 1.86604 1.68441 1.44749 1.34740 0.95182 0.74251 0.88525 0.84237 1.21173 0.92938 0.91026 0.97936 1.21469 1.01024 1.12132 0.91835 1.21793 0.95175 1.01821 0.97507 1.21401 0.94549 0.93403 1.04522 0.91762 0.91767 0.87857 0.89805 0.91011 0.90600 0.90732 0.75830 0.82823 0.90818 0.77379 1.18525 1.17789 0.84842 0.84835 0.90670 0.90205 0.90102 0.90440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.28 10.47 -39.27 -0.41 -0.69 16 3 C 0.46 0.56 7.25 36.00 0.26 0.82 16 4 O -0.50 -2.14 15.73 -18.75 -0.29 -2.43 16 5 C -0.08 0.14 2.63 -91.77 -0.24 -0.10 16 6 H 0.11 -0.34 8.14 -51.93 -0.42 -0.77 16 7 C -0.11 0.29 5.14 -26.73 -0.14 0.15 16 8 C -0.13 0.36 5.42 -26.73 -0.14 0.22 16 9 C 0.15 -0.33 2.14 -67.93 -0.15 -0.48 16 10 H 0.08 -0.16 6.45 -51.93 -0.33 -0.49 16 11 N -0.72 0.32 5.25 -53.93 -0.28 0.04 16 12 C 0.41 0.78 7.63 -155.02 -1.18 -0.40 16 13 N -0.54 -1.78 10.39 -12.44 -0.13 -1.91 16 14 C 0.16 0.36 9.84 -17.57 -0.17 0.18 16 15 C -0.19 -0.33 5.39 -104.46 -0.56 -0.89 16 16 C -0.06 0.00 2.81 36.00 0.10 0.10 16 17 O -0.54 -0.72 12.82 -35.23 -0.45 -1.17 16 18 Si 0.68 -0.49 29.88 -169.99 -5.08 -5.56 16 19 C 0.00 -0.01 9.84 -39.32 -0.39 -0.39 16 20 C -0.24 -0.25 8.83 -39.22 -0.35 -0.59 16 21 C -0.12 0.35 5.39 -26.73 -0.14 0.21 16 22 C -0.10 0.18 4.49 -26.73 -0.12 0.06 16 23 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 24 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 25 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 26 H 0.08 -0.22 8.11 -51.93 -0.42 -0.64 16 27 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.08 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.41 -0.38 8.73 -40.82 -0.36 -0.74 16 31 H 0.16 0.07 4.87 -52.49 -0.26 -0.19 16 32 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 33 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 34 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 35 H -0.25 -0.62 7.05 56.52 0.40 -0.22 16 36 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 37 H 0.13 -0.11 6.07 -52.49 -0.32 -0.43 16 38 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.08 -0.08 8.10 -51.93 -0.42 -0.51 16 41 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 LS Contribution 334.02 15.07 5.03 5.03 Total: 0.00 -7.79 334.02 -9.72 -17.50 By element: Atomic # 1 Polarization: -4.77 SS G_CDS: -5.95 Total: -10.71 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.16 Total: -0.09 kcal Atomic # 7 Polarization: -1.46 SS G_CDS: -0.41 Total: -1.87 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -1.16 Total: -4.30 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.08 Total: -5.56 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -7.79 -9.72 -17.50 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14475162_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.204 kcal (2) G-P(sol) polarization free energy of solvation -7.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.717 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.708 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds