Wall clock time and date at job start Tue Mar 9 2021 12:55:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.30276 * 126.28118 * 2 1 4 4 N 1.28665 * 109.37789 * 180.02562 * 3 2 1 5 5 C 1.30268 * 109.38645 * 0.02562 * 4 3 2 6 6 C 1.50695 * 126.28450 * 179.97438 * 5 4 3 7 7 H 1.09001 * 112.85075 * 168.82469 * 6 5 4 8 8 C 1.53780 * 113.61363 * 300.01658 * 6 5 4 9 9 C 1.53781 * 87.08010 * 140.06722 * 8 6 5 10 10 H 1.08995 * 113.61444 * 89.20280 * 9 8 6 11 11 N 1.46502 * 113.61622 * 220.02025 * 9 8 6 12 12 C 1.38997 * 120.00434 * 205.00197 * 11 9 8 13 13 N 1.32400 * 119.70737 * 180.02562 * 12 11 9 14 14 C 1.31969 * 121.62008 * 180.02562 * 13 12 11 15 15 C 1.38023 * 120.86049 * 0.02562 * 14 13 12 16 16 C 1.50696 * 120.33856 * 179.97438 * 15 14 13 17 17 O 1.42903 * 109.47131 * 119.99650 * 16 15 14 18 18 Si 1.86305 * 109.47185 * 0.02562 * 16 15 14 19 19 C 1.38885 * 119.32718 * 0.27377 * 15 14 13 20 20 C 1.38295 * 118.50402 * 359.45938 * 19 15 14 21 21 C 1.53780 * 87.08315 * 334.56886 * 9 8 6 22 22 O 1.34364 * 107.43502 * 0.23361 * 5 4 3 23 23 H 1.08999 * 109.47534 * 89.97195 * 1 2 3 24 24 H 1.09001 * 109.46968 * 209.97484 * 1 2 3 25 25 H 1.09005 * 109.47214 * 329.96928 * 1 2 3 26 26 H 1.09000 * 113.61513 * 25.52334 * 8 6 5 27 27 H 1.08995 * 113.69603 * 254.62688 * 8 6 5 28 28 H 0.97000 * 119.99606 * 25.00086 * 11 9 8 29 29 H 1.07998 * 119.57071 * 180.02562 * 14 13 12 30 30 H 1.08999 * 109.47358 * 240.00010 * 16 15 14 31 31 H 0.96700 * 114.00311 * 300.00591 * 17 16 15 32 32 H 1.48499 * 109.99670 * 58.67633 * 18 16 15 33 33 H 1.48497 * 110.00233 * 179.97438 * 18 16 15 34 34 H 1.07999 * 120.74579 * 179.70295 * 19 15 14 35 35 H 1.08001 * 120.45287 * 180.28195 * 20 19 15 36 36 H 1.09002 * 113.61641 * 139.98218 * 21 9 8 37 37 H 1.09001 * 113.61625 * 270.88748 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 -0.0005 5 6 3.5654 -0.6254 -0.0015 6 6 4.8176 -1.4637 -0.0029 7 1 4.6213 -2.5182 0.1912 8 6 5.7208 -1.2198 -1.2234 9 6 6.9157 -1.3199 -0.2605 10 1 7.2938 -2.3348 -0.1379 11 7 7.9758 -0.3475 -0.5376 12 6 9.2826 -0.6134 -0.1458 13 7 10.2360 0.2698 -0.3988 14 6 11.4891 0.0559 -0.0443 15 6 11.8522 -1.1054 0.6072 16 6 13.2867 -1.3378 1.0062 17 8 13.3674 -1.4938 2.4243 18 14 14.3209 0.1208 0.4828 19 6 10.8831 -2.0606 0.8858 20 6 9.5775 -1.8060 0.5073 21 6 5.9528 -0.8804 0.8551 22 8 2.3022 -1.0831 -0.0067 23 1 -0.3634 0.0005 -1.0276 24 1 -0.3633 -0.8902 0.5135 25 1 -0.3634 0.8897 0.5143 26 1 5.5987 -0.2314 -1.6664 27 1 5.6862 -2.0215 -1.9611 28 1 7.7656 0.4820 -0.9944 29 1 12.2402 0.7993 -0.2668 30 1 13.6576 -2.2399 0.5196 31 1 13.0531 -0.7272 2.9230 32 1 13.8054 1.3617 1.1148 33 1 15.7377 -0.0958 0.8710 34 1 11.1426 -2.9796 1.3902 35 1 8.7981 -2.5249 0.7124 36 1 6.1046 -1.4089 1.7963 37 1 5.8940 0.2008 0.9803 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_14942246_13915762.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:08 Heat of formation + Delta-G solvation = 84.608634 kcal Electronic energy + Delta-G solvation = -21777.149946 eV Core-core repulsion = 18331.434026 eV Total energy + Delta-G solvation = -3445.715920 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.121 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -45.23781 -41.55461 -40.40658 -38.00117 -37.15712 -35.68974 -33.80838 -33.33250 -31.38894 -29.63923 -27.15702 -27.08987 -25.90931 -24.88143 -23.78528 -23.39750 -22.34083 -20.92220 -19.00988 -18.55399 -18.43316 -18.32666 -17.54304 -16.79608 -16.54907 -16.41959 -16.21404 -15.72487 -15.41991 -15.21735 -14.82240 -14.48314 -14.28508 -14.02132 -13.90166 -13.86199 -13.78430 -13.37135 -13.31410 -12.85414 -12.72196 -12.57155 -12.36848 -12.15165 -11.91318 -11.84432 -11.17073 -10.76231 -10.52060 -10.43358 -10.35340 -8.73597 -4.93800 0.09417 0.24377 0.42732 1.16539 1.32029 1.35830 1.62110 1.99246 2.04083 2.70999 2.81919 3.06321 3.19705 3.38248 3.39847 3.46447 3.52315 3.60625 3.77645 3.86252 3.98622 4.06743 4.18775 4.20219 4.26206 4.31515 4.34156 4.47657 4.49412 4.55534 4.58242 4.62112 4.68404 4.73640 4.76580 4.96771 5.03253 5.30920 5.50960 5.96630 6.42807 6.50427 7.15842 7.30637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.163 3.837 3 N -0.288 5.288 4 N -0.280 5.280 5 C 0.172 3.828 6 C -0.021 4.021 7 H 0.128 0.872 8 C -0.129 4.129 9 C 0.137 3.863 10 H 0.119 0.881 11 N -0.709 5.709 12 C 0.409 3.591 13 N -0.538 5.538 14 C 0.157 3.843 15 C -0.234 4.234 16 C -0.059 4.059 17 O -0.532 6.532 18 Si 0.677 3.323 19 C -0.005 4.005 20 C -0.240 4.240 21 C -0.139 4.139 22 O -0.225 6.225 23 H 0.101 0.899 24 H 0.094 0.906 25 H 0.108 0.892 26 H 0.101 0.899 27 H 0.091 0.909 28 H 0.410 0.590 29 H 0.155 0.845 30 H 0.117 0.883 31 H 0.375 0.625 32 H -0.258 1.258 33 H -0.256 1.256 34 H 0.136 0.864 35 H 0.134 0.866 36 H 0.086 0.914 37 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.138 -4.251 -1.697 5.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.047 4.047 3 N -0.135 5.135 4 N -0.127 5.127 5 C -0.039 4.039 6 C -0.042 4.042 7 H 0.146 0.854 8 C -0.169 4.169 9 C 0.030 3.970 10 H 0.137 0.863 11 N -0.340 5.340 12 C 0.173 3.827 13 N -0.255 5.255 14 C 0.000 4.000 15 C -0.239 4.239 16 C -0.169 4.169 17 O -0.338 6.338 18 Si 0.579 3.421 19 C -0.031 4.031 20 C -0.264 4.264 21 C -0.179 4.179 22 O -0.105 6.105 23 H 0.119 0.881 24 H 0.113 0.887 25 H 0.127 0.873 26 H 0.119 0.881 27 H 0.110 0.890 28 H 0.246 0.754 29 H 0.172 0.828 30 H 0.134 0.866 31 H 0.223 0.777 32 H -0.183 1.183 33 H -0.181 1.181 34 H 0.154 0.846 35 H 0.152 0.848 36 H 0.105 0.895 37 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -2.359 -2.305 -1.998 3.856 hybrid contribution -0.917 -1.570 1.379 2.282 sum -3.276 -3.876 -0.619 5.112 Atomic orbital electron populations 1.20408 0.79960 1.05956 1.05489 1.28115 0.97959 0.79501 0.99155 1.74456 0.95940 1.25511 1.17612 1.74329 1.12387 1.08999 1.16956 1.27662 0.84689 0.91624 0.99909 1.20984 0.84164 0.98441 1.00602 0.85442 1.23502 0.92613 1.04731 0.96009 1.22369 0.85326 0.93921 0.95375 0.86328 1.44437 1.03162 1.22772 1.63669 1.18419 0.85742 0.89209 0.89299 1.67164 1.00894 1.32280 1.25152 1.22224 0.91686 0.94446 0.91661 1.20939 0.97560 0.97668 1.07730 1.24750 0.96333 1.11813 0.84053 1.86588 1.87074 1.43858 1.16319 0.95173 0.78958 0.75936 0.92072 1.21191 0.91278 0.97854 0.92771 1.21472 0.98213 0.98856 1.07905 1.23731 0.92048 1.03679 0.98401 1.84787 1.17557 1.38468 1.69681 0.88090 0.88722 0.87320 0.88093 0.89022 0.75355 0.82794 0.86555 0.77701 1.18298 1.18079 0.84621 0.84826 0.89535 0.87631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.19 10.51 36.01 0.38 0.57 16 2 C 0.16 0.26 8.48 -12.94 -0.11 0.15 16 3 N -0.29 -1.30 12.22 32.55 0.40 -0.90 16 4 N -0.28 -1.16 11.84 32.55 0.39 -0.78 16 5 C 0.17 0.26 7.54 -12.95 -0.10 0.16 16 6 C -0.02 0.05 4.29 -90.96 -0.39 -0.34 16 7 H 0.13 -0.58 8.14 -51.93 -0.42 -1.00 16 8 C -0.13 0.39 7.38 -25.92 -0.19 0.20 16 9 C 0.14 -0.41 4.03 -67.12 -0.27 -0.68 16 10 H 0.12 -0.53 6.10 -51.93 -0.32 -0.85 16 11 N -0.71 0.49 5.53 -53.14 -0.29 0.20 16 12 C 0.41 0.49 7.65 -155.02 -1.19 -0.70 16 13 N -0.54 -1.41 10.39 -12.44 -0.13 -1.54 16 14 C 0.16 0.17 9.84 -17.57 -0.17 0.00 16 15 C -0.23 -0.08 5.39 -104.46 -0.56 -0.65 16 16 C -0.06 0.02 2.84 36.00 0.10 0.12 16 17 O -0.53 -0.59 12.78 -35.23 -0.45 -1.04 16 18 Si 0.68 -0.57 29.82 -169.99 -5.07 -5.63 16 19 C -0.01 0.00 9.77 -39.32 -0.38 -0.38 16 20 C -0.24 0.02 9.29 -39.23 -0.36 -0.34 16 21 C -0.14 0.31 7.42 -25.92 -0.19 0.12 16 22 O -0.23 -0.40 10.87 5.37 0.06 -0.34 16 23 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 24 H 0.09 -0.44 8.14 -51.93 -0.42 -0.87 16 25 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 26 H 0.10 -0.16 8.07 -51.93 -0.42 -0.58 16 27 H 0.09 -0.38 8.14 -51.93 -0.42 -0.81 16 28 H 0.41 -0.22 8.85 -40.82 -0.36 -0.58 16 29 H 0.16 -0.11 4.88 -52.49 -0.26 -0.37 16 30 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 31 H 0.38 -0.54 8.70 45.56 0.40 -0.15 16 32 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 33 H -0.26 -0.63 7.11 56.52 0.40 -0.22 16 34 H 0.14 -0.14 8.06 -52.49 -0.42 -0.56 16 35 H 0.13 -0.32 6.03 -52.49 -0.32 -0.64 16 36 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 37 H 0.11 -0.01 7.79 -51.93 -0.40 -0.41 16 LS Contribution 317.38 15.07 4.78 4.78 Total: 0.00 -8.93 317.38 -8.01 -16.93 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -4.25 Total: -9.91 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -3.44 Total: -1.78 kcal Atomic # 7 Polarization: -3.38 SS G_CDS: 0.36 Total: -3.02 kcal Atomic # 8 Polarization: -0.99 SS G_CDS: -0.39 Total: -1.38 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.07 Total: -5.63 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -8.93 -8.01 -16.93 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14942246_13915762.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.541 kcal (2) G-P(sol) polarization free energy of solvation -8.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.933 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds