Wall clock time and date at job start Tue Mar 9 2021 12:55:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.30276 * 126.28118 * 2 1 4 4 N 1.28665 * 109.37789 * 180.02562 * 3 2 1 5 5 C 1.30268 * 109.38645 * 0.02562 * 4 3 2 6 6 C 1.50695 * 126.28450 * 179.97438 * 5 4 3 7 7 H 1.09001 * 112.85075 * 168.82469 * 6 5 4 8 8 C 1.53780 * 113.61363 * 300.01658 * 6 5 4 9 9 C 1.53781 * 87.08010 * 140.06722 * 8 6 5 10 10 H 1.08995 * 113.61444 * 89.20280 * 9 8 6 11 11 N 1.46502 * 113.61622 * 220.02025 * 9 8 6 12 12 C 1.38997 * 120.00434 * 205.00197 * 11 9 8 13 13 N 1.32400 * 119.70737 * 180.02562 * 12 11 9 14 14 C 1.31969 * 121.62008 * 180.02562 * 13 12 11 15 15 C 1.38023 * 120.86049 * 0.02562 * 14 13 12 16 16 C 1.50696 * 120.33856 * 179.97438 * 15 14 13 17 17 O 1.42903 * 109.47131 * 119.99650 * 16 15 14 18 18 Si 1.86305 * 109.47185 * 0.02562 * 16 15 14 19 19 C 1.38885 * 119.32718 * 0.27377 * 15 14 13 20 20 C 1.38295 * 118.50402 * 359.45938 * 19 15 14 21 21 C 1.53780 * 87.08315 * 334.56886 * 9 8 6 22 22 O 1.34364 * 107.43502 * 0.23361 * 5 4 3 23 23 H 1.08999 * 109.47534 * 89.97195 * 1 2 3 24 24 H 1.09001 * 109.46968 * 209.97484 * 1 2 3 25 25 H 1.09005 * 109.47214 * 329.96928 * 1 2 3 26 26 H 1.09000 * 113.61513 * 25.52334 * 8 6 5 27 27 H 1.08995 * 113.69603 * 254.62688 * 8 6 5 28 28 H 0.97000 * 119.99606 * 25.00086 * 11 9 8 29 29 H 1.07998 * 119.57071 * 180.02562 * 14 13 12 30 30 H 1.08999 * 109.47358 * 240.00010 * 16 15 14 31 31 H 0.96700 * 114.00311 * 300.00591 * 17 16 15 32 32 H 1.48499 * 109.99670 * 58.67633 * 18 16 15 33 33 H 1.48497 * 110.00233 * 179.97438 * 18 16 15 34 34 H 1.07999 * 120.74579 * 179.70295 * 19 15 14 35 35 H 1.08001 * 120.45287 * 180.28195 * 20 19 15 36 36 H 1.09002 * 113.61641 * 139.98218 * 21 9 8 37 37 H 1.09001 * 113.61625 * 270.88748 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 -0.0005 5 6 3.5654 -0.6254 -0.0015 6 6 4.8176 -1.4637 -0.0029 7 1 4.6213 -2.5182 0.1912 8 6 5.7208 -1.2198 -1.2234 9 6 6.9157 -1.3199 -0.2605 10 1 7.2938 -2.3348 -0.1379 11 7 7.9758 -0.3475 -0.5376 12 6 9.2826 -0.6134 -0.1458 13 7 10.2360 0.2698 -0.3988 14 6 11.4891 0.0559 -0.0443 15 6 11.8522 -1.1054 0.6072 16 6 13.2867 -1.3378 1.0062 17 8 13.3674 -1.4938 2.4243 18 14 14.3209 0.1208 0.4828 19 6 10.8831 -2.0606 0.8858 20 6 9.5775 -1.8060 0.5073 21 6 5.9528 -0.8804 0.8551 22 8 2.3022 -1.0831 -0.0067 23 1 -0.3634 0.0005 -1.0276 24 1 -0.3633 -0.8902 0.5135 25 1 -0.3634 0.8897 0.5143 26 1 5.5987 -0.2314 -1.6664 27 1 5.6862 -2.0215 -1.9611 28 1 7.7656 0.4820 -0.9944 29 1 12.2402 0.7993 -0.2668 30 1 13.6576 -2.2399 0.5196 31 1 13.0531 -0.7272 2.9230 32 1 13.8054 1.3617 1.1148 33 1 15.7377 -0.0958 0.8710 34 1 11.1426 -2.9796 1.3902 35 1 8.7981 -2.5249 0.7124 36 1 6.1046 -1.4089 1.7963 37 1 5.8940 0.2008 0.9803 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_14942246_13915762.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:08 Heat of formation + Delta-G solvation = 80.151155 kcal Electronic energy + Delta-G solvation = -21777.343237 eV Core-core repulsion = 18331.434026 eV Total energy + Delta-G solvation = -3445.909211 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.121 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -45.33532 -41.50743 -40.27202 -38.01413 -37.28517 -35.63861 -33.77583 -33.32315 -31.34184 -29.56284 -27.13059 -26.88712 -25.90732 -24.85444 -23.80440 -23.42674 -22.32075 -20.75609 -18.95849 -18.58078 -18.48297 -18.34257 -17.55628 -16.66052 -16.46935 -16.40151 -16.20965 -15.67548 -15.36019 -15.16470 -14.74992 -14.32879 -14.26414 -13.97654 -13.77221 -13.63547 -13.61982 -13.47368 -13.32544 -12.99072 -12.61272 -12.46629 -12.32728 -12.09141 -11.91695 -11.82853 -11.08586 -10.75706 -10.52480 -10.50295 -10.37317 -8.68841 -4.90909 0.04736 0.25035 0.43567 1.18151 1.23494 1.34893 1.61123 1.96869 2.13136 2.77910 2.83019 3.22472 3.37730 3.46011 3.50353 3.60141 3.68719 3.73041 3.80569 3.97493 4.03913 4.11895 4.29073 4.37339 4.39937 4.49946 4.51092 4.62181 4.65596 4.66643 4.67790 4.79769 4.85541 4.89795 4.99977 5.02810 5.16186 5.35917 5.57647 6.04996 6.50558 6.52928 7.16696 7.19334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.168 3.832 3 N -0.335 5.335 4 N -0.319 5.319 5 C 0.176 3.824 6 C -0.019 4.019 7 H 0.159 0.841 8 C -0.124 4.124 9 C 0.143 3.857 10 H 0.144 0.856 11 N -0.710 5.710 12 C 0.395 3.605 13 N -0.569 5.569 14 C 0.144 3.856 15 C -0.234 4.234 16 C -0.060 4.060 17 O -0.548 6.548 18 Si 0.752 3.248 19 C -0.011 4.011 20 C -0.238 4.238 21 C -0.139 4.139 22 O -0.230 6.230 23 H 0.117 0.883 24 H 0.115 0.885 25 H 0.115 0.885 26 H 0.081 0.919 27 H 0.111 0.889 28 H 0.405 0.595 29 H 0.164 0.836 30 H 0.128 0.872 31 H 0.384 0.616 32 H -0.288 1.288 33 H -0.300 1.300 34 H 0.149 0.851 35 H 0.159 0.841 36 H 0.099 0.901 37 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.842 -6.273 -1.760 7.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.043 4.043 3 N -0.181 5.181 4 N -0.164 5.164 5 C -0.036 4.036 6 C -0.039 4.039 7 H 0.176 0.824 8 C -0.163 4.163 9 C 0.037 3.963 10 H 0.161 0.839 11 N -0.340 5.340 12 C 0.159 3.841 13 N -0.287 5.287 14 C -0.013 4.013 15 C -0.240 4.240 16 C -0.170 4.170 17 O -0.356 6.356 18 Si 0.658 3.342 19 C -0.037 4.037 20 C -0.262 4.262 21 C -0.178 4.178 22 O -0.110 6.110 23 H 0.136 0.864 24 H 0.133 0.867 25 H 0.133 0.867 26 H 0.100 0.900 27 H 0.129 0.871 28 H 0.241 0.759 29 H 0.180 0.820 30 H 0.146 0.854 31 H 0.233 0.767 32 H -0.215 1.215 33 H -0.228 1.228 34 H 0.167 0.833 35 H 0.177 0.823 36 H 0.118 0.882 37 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -3.086 -4.318 -2.068 5.695 hybrid contribution -0.722 -0.917 1.427 1.843 sum -3.807 -5.235 -0.641 6.504 Atomic orbital electron populations 1.20702 0.76913 1.07243 1.06885 1.28990 0.99368 0.78883 0.97103 1.74374 0.96581 1.27233 1.19928 1.74243 1.12725 1.10642 1.18793 1.28390 0.85595 0.91377 0.98237 1.21323 0.82398 0.99339 1.00808 0.82357 1.23453 0.92258 1.04406 0.96202 1.22525 0.84610 0.94396 0.94739 0.83884 1.44588 1.03101 1.23052 1.63285 1.18697 0.86032 0.89651 0.89719 1.67140 1.01725 1.33464 1.26360 1.22417 0.91648 0.95111 0.92112 1.20968 0.97885 0.97538 1.07565 1.24847 0.96126 1.12474 0.83566 1.86559 1.87236 1.44777 1.17050 0.94281 0.75157 0.73792 0.90940 1.21425 0.91375 0.98220 0.92690 1.21724 0.98823 0.98685 1.06990 1.23674 0.92531 1.02229 0.99409 1.84809 1.17725 1.38555 1.69951 0.86437 0.86678 0.86685 0.89994 0.87098 0.75902 0.81975 0.85437 0.76668 1.21490 1.22840 0.83344 0.82338 0.88205 0.90333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.41 10.51 71.24 0.75 1.16 16 2 C 0.17 0.61 8.48 88.34 0.75 1.36 16 3 N -0.33 -3.58 12.22 -165.50 -2.02 -5.61 16 4 N -0.32 -3.23 11.84 -165.51 -1.96 -5.19 16 5 C 0.18 0.62 7.54 88.34 0.67 1.29 16 6 C -0.02 0.10 4.29 -11.02 -0.05 0.05 16 7 H 0.16 -1.84 8.14 -2.39 -0.02 -1.86 16 8 C -0.12 0.81 7.38 31.12 0.23 1.04 16 9 C 0.14 -0.99 4.03 45.52 0.18 -0.81 16 10 H 0.14 -1.68 6.10 -2.39 -0.01 -1.69 16 11 N -0.71 0.84 5.53 -322.05 -1.78 -0.94 16 12 C 0.39 0.93 7.65 133.07 1.02 1.95 16 13 N -0.57 -3.41 10.39 -193.27 -2.01 -5.42 16 14 C 0.14 0.39 9.84 84.62 0.83 1.23 16 15 C -0.23 -0.11 5.39 -19.76 -0.11 -0.22 16 16 C -0.06 0.05 2.84 71.23 0.20 0.26 16 17 O -0.55 -1.10 12.78 -148.98 -1.90 -3.01 16 18 Si 0.75 -0.79 29.82 68.60 2.05 1.26 16 19 C -0.01 0.01 9.77 22.44 0.22 0.23 16 20 C -0.24 0.33 9.29 22.50 0.21 0.54 16 21 C -0.14 0.65 7.42 31.12 0.23 0.89 16 22 O -0.23 -0.82 10.87 -3.70 -0.04 -0.86 16 23 H 0.12 -1.17 8.14 -2.39 -0.02 -1.18 16 24 H 0.11 -1.25 8.14 -2.39 -0.02 -1.27 16 25 H 0.11 -0.92 8.14 -2.38 -0.02 -0.94 16 26 H 0.08 -0.18 8.07 -2.39 -0.02 -0.20 16 27 H 0.11 -1.13 8.14 -2.39 -0.02 -1.15 16 28 H 0.41 0.11 8.85 -92.71 -0.82 -0.71 16 29 H 0.16 -0.11 4.88 -2.91 -0.01 -0.12 16 30 H 0.13 -0.40 7.96 -2.39 -0.02 -0.42 16 31 H 0.38 -1.05 8.70 -74.06 -0.64 -1.70 16 32 H -0.29 -1.07 7.11 99.48 0.71 -0.37 16 33 H -0.30 -1.92 7.11 99.48 0.71 -1.21 16 34 H 0.15 -0.54 8.06 -2.91 -0.02 -0.56 16 35 H 0.16 -1.16 6.03 -2.91 -0.02 -1.18 16 36 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 37 H 0.08 0.11 7.79 -2.39 -0.02 0.09 16 Total: 0.00 -23.21 317.38 -2.83 -26.04 By element: Atomic # 1 Polarization: -14.94 SS G_CDS: -0.29 Total: -15.23 kcal Atomic # 6 Polarization: 3.83 SS G_CDS: 5.13 Total: 8.96 kcal Atomic # 7 Polarization: -9.39 SS G_CDS: -7.77 Total: -17.16 kcal Atomic # 8 Polarization: -1.92 SS G_CDS: -1.94 Total: -3.86 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: 2.05 Total: 1.26 kcal Total: -23.21 -2.83 -26.04 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_14942246_13915762.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.195 kcal (2) G-P(sol) polarization free energy of solvation -23.213 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.830 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.043 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.151 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds