Wall clock time and date at job start Tue Mar 9 2021 13:23:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.38413 * 119.99862 * 2 1 4 4 N 1.32493 * 119.21365 * 0.02562 * 3 2 1 5 5 C 1.32279 * 120.73637 * 179.97438 * 4 3 2 6 6 C 1.38600 * 119.19926 * 0.02562 * 5 4 3 7 7 C 1.50697 * 120.72125 * 179.97438 * 6 5 4 8 8 O 1.42903 * 109.46995 * 65.00516 * 7 6 5 9 9 Si 1.86305 * 109.47230 * 185.00254 * 7 6 5 10 10 C 1.38600 * 118.55842 * 0.25308 * 6 5 4 11 11 N 1.32284 * 119.19751 * 359.51191 * 10 6 5 12 12 C 1.46504 * 120.00370 * 180.02562 * 2 1 3 13 13 H 1.08994 * 109.46858 * 240.79203 * 12 2 1 14 14 C 1.52999 * 109.46870 * 0.79473 * 12 2 1 15 15 C 1.52999 * 109.47331 * 59.99836 * 14 12 2 16 16 C 1.53004 * 109.46915 * 60.00177 * 15 14 12 17 17 H 1.08998 * 109.47284 * 59.99690 * 16 15 14 18 18 O 1.42897 * 109.47211 * 180.02562 * 16 15 14 19 19 C 1.52999 * 109.46977 * 300.00040 * 16 15 14 20 20 C 1.52995 * 109.47229 * 120.79228 * 12 2 1 21 21 H 1.08996 * 109.47696 * 84.10201 * 1 2 3 22 22 H 1.09006 * 109.46891 * 204.10316 * 1 2 3 23 23 H 1.08999 * 109.47590 * 324.09654 * 1 2 3 24 24 H 1.08004 * 120.39936 * 180.02562 * 5 4 3 25 25 H 1.09000 * 109.47347 * 305.00483 * 7 6 5 26 26 H 0.96695 * 114.00103 * 59.99737 * 8 7 6 27 27 H 1.48496 * 109.99779 * 58.68445 * 9 7 6 28 28 H 1.48498 * 109.99925 * 180.02562 * 9 7 6 29 29 H 1.07999 * 120.40509 * 179.72292 * 10 6 5 30 30 H 1.08998 * 109.46828 * 180.02562 * 14 12 2 31 31 H 1.09002 * 109.47220 * 300.00273 * 14 12 2 32 32 H 1.09000 * 109.47012 * 179.97438 * 15 14 12 33 33 H 1.08991 * 109.47526 * 300.00341 * 15 14 12 34 34 H 0.96701 * 113.99817 * 179.97438 * 18 16 15 35 35 H 1.09002 * 109.47220 * 179.97438 * 19 16 15 36 36 H 1.09002 * 109.47281 * 300.00094 * 19 16 15 37 37 H 1.09003 * 109.47270 * 60.00029 * 20 12 2 38 38 H 1.08998 * 109.47150 * 179.97438 * 20 12 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1570 1.1987 0.0000 4 7 1.4788 2.3369 0.0005 5 6 2.1095 3.4997 0.0010 6 6 3.4954 3.5172 0.0005 7 6 4.2488 4.8223 0.0005 8 8 3.9944 5.5191 1.2219 9 14 6.0747 4.4853 -0.1535 10 6 4.1733 2.3083 -0.0059 11 7 3.4817 1.1806 -0.0015 12 6 2.1976 -1.2687 -0.0006 13 1 2.8135 -1.3329 0.8964 14 6 1.2035 -2.4316 -0.0211 15 6 0.3389 -2.3413 -1.2801 16 6 1.2334 -2.4132 -2.5193 17 1 1.7785 -3.3571 -2.5197 18 8 0.4260 -2.3283 -3.6953 19 6 2.2275 -1.2503 -2.4988 20 6 3.0921 -1.3406 -1.2397 21 1 -0.3634 0.1056 -1.0221 22 1 -0.3633 -0.9381 0.4197 23 1 -0.3634 0.8324 0.6026 24 1 1.5512 4.4242 0.0019 25 1 3.9196 5.4319 -0.8410 26 1 4.2630 5.0346 2.0144 27 1 6.3486 3.7331 -1.4042 28 1 6.8289 5.7645 -0.1540 29 1 5.2531 2.2871 -0.0110 30 1 1.7485 -3.3755 -0.0211 31 1 0.5661 -2.3804 0.8617 32 1 -0.3690 -3.1700 -1.2949 33 1 -0.2061 -1.3974 -1.2798 34 1 0.9282 -2.3671 -4.5208 35 1 2.8652 -1.3018 -3.3814 36 1 1.6825 -0.3063 -2.4984 37 1 3.8003 -0.5121 -1.2251 38 1 3.6375 -2.2843 -1.2399 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15557738_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:09 Heat of formation + Delta-G solvation = 6.124127 kcal Electronic energy + Delta-G solvation = -21344.415752 eV Core-core repulsion = 18189.863202 eV Total energy + Delta-G solvation = -3154.552550 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.24827 -40.70944 -38.17593 -37.47885 -35.17750 -34.59307 -32.92745 -31.94776 -30.30933 -27.94722 -26.06191 -25.44833 -23.79842 -23.50229 -22.25784 -20.90879 -18.98296 -18.42240 -18.10825 -17.93271 -17.21171 -16.55600 -16.38281 -15.94403 -15.74644 -15.51860 -15.32303 -14.69611 -14.63585 -14.44674 -14.06538 -13.92796 -13.78036 -13.41973 -13.05018 -12.92442 -12.76470 -12.24250 -12.16845 -12.06884 -11.76839 -11.72652 -11.62521 -11.21162 -10.98405 -10.68576 -10.50079 -9.92004 -8.83707 -5.11348 0.11338 0.20551 1.23034 1.55928 1.63041 1.92391 2.86790 3.09832 3.20965 3.39918 3.45263 3.63653 3.65624 3.75143 3.80940 3.99503 4.02711 4.14204 4.21710 4.26739 4.28335 4.39151 4.43060 4.50723 4.54584 4.61382 4.77163 4.80193 4.84669 4.97444 5.01385 5.09065 5.15570 5.23220 5.31565 5.36925 5.82552 5.89937 6.43520 6.52522 6.68195 7.29612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.091 3.909 2 N -0.575 5.575 3 C 0.569 3.431 4 N -0.567 5.567 5 C 0.223 3.777 6 C -0.297 4.297 7 C -0.045 4.045 8 O -0.541 6.541 9 Si 0.679 3.321 10 C 0.197 3.803 11 N -0.560 5.560 12 C 0.165 3.835 13 H 0.080 0.920 14 C -0.125 4.125 15 C -0.143 4.143 16 C 0.106 3.894 17 H 0.053 0.947 18 O -0.569 6.569 19 C -0.147 4.147 20 C -0.137 4.137 21 H 0.060 0.940 22 H 0.083 0.917 23 H 0.074 0.926 24 H 0.168 0.832 25 H 0.114 0.886 26 H 0.379 0.621 27 H -0.256 1.256 28 H -0.251 1.251 29 H 0.165 0.835 30 H 0.085 0.915 31 H 0.079 0.921 32 H 0.072 0.928 33 H 0.096 0.904 34 H 0.378 0.622 35 H 0.061 0.939 36 H 0.066 0.934 37 H 0.095 0.905 38 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.084 -2.377 1.808 3.641 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 N -0.291 5.291 3 C 0.214 3.786 4 N -0.288 5.288 5 C 0.054 3.946 6 C -0.306 4.306 7 C -0.157 4.157 8 O -0.346 6.346 9 Si 0.581 3.419 10 C 0.030 3.970 11 N -0.281 5.281 12 C 0.062 3.938 13 H 0.098 0.902 14 C -0.163 4.163 15 C -0.180 4.180 16 C 0.048 3.952 17 H 0.071 0.929 18 O -0.375 6.375 19 C -0.185 4.185 20 C -0.175 4.175 21 H 0.078 0.922 22 H 0.101 0.899 23 H 0.093 0.907 24 H 0.185 0.815 25 H 0.132 0.868 26 H 0.226 0.774 27 H -0.181 1.181 28 H -0.176 1.176 29 H 0.182 0.818 30 H 0.103 0.897 31 H 0.098 0.902 32 H 0.090 0.910 33 H 0.114 0.886 34 H 0.225 0.775 35 H 0.080 0.920 36 H 0.085 0.915 37 H 0.113 0.887 38 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 1.461 -2.877 1.374 3.507 hybrid contribution 0.436 0.881 -0.803 1.269 sum 1.897 -1.996 0.571 2.812 Atomic orbital electron populations 1.22018 0.77898 1.03300 1.01881 1.46153 1.05599 1.01324 1.76036 1.19298 0.85163 0.86284 0.87857 1.68012 1.40776 0.97845 1.22190 1.22832 0.90941 0.95194 0.85604 1.21663 0.97153 0.97457 1.14288 1.24682 1.09546 0.91409 0.90111 1.86509 1.86999 1.46032 1.15056 0.95024 0.75735 0.83555 0.87569 1.22763 0.99594 0.86632 0.88055 1.67961 1.06927 1.30947 1.22302 1.21022 0.92699 0.81146 0.98896 0.90166 1.21838 0.98111 0.98071 0.98263 1.22146 0.98470 1.05197 0.92143 1.21798 0.91125 0.96611 0.85696 0.92903 1.86507 1.37969 1.96987 1.16018 1.22190 0.98106 0.99813 0.98379 1.22008 0.98503 1.03883 0.93116 0.92173 0.89870 0.90703 0.81468 0.86830 0.77405 1.18062 1.17558 0.81836 0.89665 0.90241 0.90955 0.88645 0.77494 0.92023 0.91550 0.88676 0.90894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.00 8.23 59.85 0.49 0.49 16 2 N -0.58 -0.60 2.34 -176.28 -0.41 -1.02 16 3 C 0.57 1.51 7.89 -322.81 -2.55 -1.03 16 4 N -0.57 -1.68 9.22 -13.93 -0.13 -1.81 16 5 C 0.22 0.28 10.99 -17.23 -0.19 0.09 16 6 C -0.30 0.01 5.36 -104.36 -0.56 -0.55 16 7 C -0.05 0.05 2.83 36.00 0.10 0.15 16 8 O -0.54 0.30 12.85 -35.23 -0.45 -0.16 16 9 Si 0.68 -1.23 29.88 -169.99 -5.08 -6.31 16 10 C 0.20 0.03 9.92 -17.22 -0.17 -0.15 16 11 N -0.56 -1.09 7.45 -13.93 -0.10 -1.20 16 12 C 0.17 -0.06 2.93 -67.93 -0.20 -0.26 16 13 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 14 C -0.13 0.23 4.91 -26.73 -0.13 0.10 16 15 C -0.14 0.06 4.91 -26.73 -0.13 -0.07 16 16 C 0.11 0.02 3.47 -26.73 -0.09 -0.07 16 17 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 18 O -0.57 -0.88 13.32 -35.23 -0.47 -1.35 16 19 C -0.15 -0.06 5.39 -26.73 -0.14 -0.21 16 20 C -0.14 0.02 5.23 -26.73 -0.14 -0.12 16 21 H 0.06 0.04 6.70 -51.93 -0.35 -0.31 16 22 H 0.08 -0.15 4.95 -51.93 -0.26 -0.40 16 23 H 0.07 0.05 7.54 -51.93 -0.39 -0.34 16 24 H 0.17 -0.06 8.06 -52.48 -0.42 -0.49 16 25 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 26 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 27 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 28 H -0.25 -0.39 7.11 56.52 0.40 0.02 16 29 H 0.17 -0.41 5.07 -52.49 -0.27 -0.68 16 30 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 31 H 0.08 -0.20 6.89 -51.93 -0.36 -0.56 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.10 0.02 3.66 -51.93 -0.19 -0.17 16 34 H 0.38 -0.76 9.08 45.56 0.41 -0.35 16 35 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.07 0.18 7.60 -51.93 -0.39 -0.21 16 37 H 0.09 0.13 5.86 -51.93 -0.30 -0.18 16 38 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 292.27 15.07 4.40 4.40 Total: 0.00 -6.83 292.27 -10.22 -17.05 By element: Atomic # 1 Polarization: -3.71 SS G_CDS: -4.27 Total: -7.98 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -3.71 Total: -1.63 kcal Atomic # 7 Polarization: -3.38 SS G_CDS: -0.64 Total: -4.02 kcal Atomic # 8 Polarization: -0.59 SS G_CDS: -0.92 Total: -1.51 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.08 Total: -6.31 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -6.83 -10.22 -17.05 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15557738_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.177 kcal (2) G-P(sol) polarization free energy of solvation -6.830 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.053 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds