Wall clock time and date at job start Tue Mar 9 2021 13:23:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.38413 * 119.99862 * 2 1 4 4 N 1.32493 * 119.21365 * 0.02562 * 3 2 1 5 5 C 1.32279 * 120.73637 * 179.97438 * 4 3 2 6 6 C 1.38600 * 119.19926 * 0.02562 * 5 4 3 7 7 C 1.50697 * 120.72125 * 179.97438 * 6 5 4 8 8 O 1.42903 * 109.46995 * 65.00516 * 7 6 5 9 9 Si 1.86305 * 109.47230 * 185.00254 * 7 6 5 10 10 C 1.38600 * 118.55842 * 0.25308 * 6 5 4 11 11 N 1.32284 * 119.19751 * 359.51191 * 10 6 5 12 12 C 1.46504 * 120.00370 * 180.02562 * 2 1 3 13 13 H 1.08994 * 109.46858 * 240.79203 * 12 2 1 14 14 C 1.52999 * 109.46870 * 0.79473 * 12 2 1 15 15 C 1.52999 * 109.47331 * 59.99836 * 14 12 2 16 16 C 1.53004 * 109.46915 * 60.00177 * 15 14 12 17 17 H 1.08998 * 109.47284 * 59.99690 * 16 15 14 18 18 O 1.42897 * 109.47211 * 180.02562 * 16 15 14 19 19 C 1.52999 * 109.46977 * 300.00040 * 16 15 14 20 20 C 1.52995 * 109.47229 * 120.79228 * 12 2 1 21 21 H 1.08996 * 109.47696 * 84.10201 * 1 2 3 22 22 H 1.09006 * 109.46891 * 204.10316 * 1 2 3 23 23 H 1.08999 * 109.47590 * 324.09654 * 1 2 3 24 24 H 1.08004 * 120.39936 * 180.02562 * 5 4 3 25 25 H 1.09000 * 109.47347 * 305.00483 * 7 6 5 26 26 H 0.96695 * 114.00103 * 59.99737 * 8 7 6 27 27 H 1.48496 * 109.99779 * 58.68445 * 9 7 6 28 28 H 1.48498 * 109.99925 * 180.02562 * 9 7 6 29 29 H 1.07999 * 120.40509 * 179.72292 * 10 6 5 30 30 H 1.08998 * 109.46828 * 180.02562 * 14 12 2 31 31 H 1.09002 * 109.47220 * 300.00273 * 14 12 2 32 32 H 1.09000 * 109.47012 * 179.97438 * 15 14 12 33 33 H 1.08991 * 109.47526 * 300.00341 * 15 14 12 34 34 H 0.96701 * 113.99817 * 179.97438 * 18 16 15 35 35 H 1.09002 * 109.47220 * 179.97438 * 19 16 15 36 36 H 1.09002 * 109.47281 * 300.00094 * 19 16 15 37 37 H 1.09003 * 109.47270 * 60.00029 * 20 12 2 38 38 H 1.08998 * 109.47150 * 179.97438 * 20 12 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1570 1.1987 0.0000 4 7 1.4788 2.3369 0.0005 5 6 2.1095 3.4997 0.0010 6 6 3.4954 3.5172 0.0005 7 6 4.2488 4.8223 0.0005 8 8 3.9944 5.5191 1.2219 9 14 6.0747 4.4853 -0.1535 10 6 4.1733 2.3083 -0.0059 11 7 3.4817 1.1806 -0.0015 12 6 2.1976 -1.2687 -0.0006 13 1 2.8135 -1.3329 0.8964 14 6 1.2035 -2.4316 -0.0211 15 6 0.3389 -2.3413 -1.2801 16 6 1.2334 -2.4132 -2.5193 17 1 1.7785 -3.3571 -2.5197 18 8 0.4260 -2.3283 -3.6953 19 6 2.2275 -1.2503 -2.4988 20 6 3.0921 -1.3406 -1.2397 21 1 -0.3634 0.1056 -1.0221 22 1 -0.3633 -0.9381 0.4197 23 1 -0.3634 0.8324 0.6026 24 1 1.5512 4.4242 0.0019 25 1 3.9196 5.4319 -0.8410 26 1 4.2630 5.0346 2.0144 27 1 6.3486 3.7331 -1.4042 28 1 6.8289 5.7645 -0.1540 29 1 5.2531 2.2871 -0.0110 30 1 1.7485 -3.3755 -0.0211 31 1 0.5661 -2.3804 0.8617 32 1 -0.3690 -3.1700 -1.2949 33 1 -0.2061 -1.3974 -1.2798 34 1 0.9282 -2.3671 -4.5208 35 1 2.8652 -1.3018 -3.3814 36 1 1.6825 -0.3063 -2.4984 37 1 3.8003 -0.5121 -1.2251 38 1 3.6375 -2.2843 -1.2399 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15557738_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:09 Heat of formation + Delta-G solvation = 7.980138 kcal Electronic energy + Delta-G solvation = -21344.335269 eV Core-core repulsion = 18189.863202 eV Total energy + Delta-G solvation = -3154.472067 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.28990 -40.70007 -38.16200 -37.48107 -35.20488 -34.65199 -32.93620 -31.92975 -30.29737 -27.95497 -26.07704 -25.46998 -23.76762 -23.50298 -22.26906 -20.89314 -19.00889 -18.45762 -18.13223 -17.90978 -17.21109 -16.56452 -16.35431 -15.94945 -15.72592 -15.52013 -15.32715 -14.71523 -14.65890 -14.47034 -14.09679 -13.91820 -13.74828 -13.39674 -13.03440 -12.90236 -12.68813 -12.27856 -12.18838 -12.05278 -11.84134 -11.75279 -11.61777 -11.20953 -10.98256 -10.69647 -10.47370 -9.98231 -8.87031 -5.00582 0.06427 0.14588 1.31584 1.61610 1.64519 1.98045 2.79833 3.12115 3.24757 3.43109 3.55725 3.67623 3.69089 3.74435 3.82003 4.01899 4.05854 4.18111 4.24336 4.29945 4.32224 4.42663 4.46128 4.54556 4.55605 4.64263 4.79727 4.82718 4.89637 5.00182 5.07202 5.12397 5.13975 5.25052 5.32379 5.36583 5.81198 5.87895 6.38180 6.78098 6.79123 7.22542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.096 3.904 2 N -0.577 5.577 3 C 0.552 3.448 4 N -0.589 5.589 5 C 0.210 3.790 6 C -0.290 4.290 7 C -0.048 4.048 8 O -0.555 6.555 9 Si 0.770 3.230 10 C 0.193 3.807 11 N -0.568 5.568 12 C 0.164 3.836 13 H 0.080 0.920 14 C -0.117 4.117 15 C -0.143 4.143 16 C 0.105 3.895 17 H 0.065 0.935 18 O -0.590 6.590 19 C -0.138 4.138 20 C -0.133 4.133 21 H 0.049 0.951 22 H 0.102 0.898 23 H 0.064 0.936 24 H 0.177 0.823 25 H 0.111 0.889 26 H 0.394 0.606 27 H -0.284 1.284 28 H -0.296 1.296 29 H 0.189 0.811 30 H 0.100 0.900 31 H 0.089 0.911 32 H 0.072 0.928 33 H 0.086 0.914 34 H 0.390 0.610 35 H 0.063 0.937 36 H 0.039 0.961 37 H 0.080 0.920 38 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.656 -3.215 2.337 4.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.293 5.293 3 C 0.197 3.803 4 N -0.312 5.312 5 C 0.042 3.958 6 C -0.298 4.298 7 C -0.159 4.159 8 O -0.363 6.363 9 Si 0.676 3.324 10 C 0.025 3.975 11 N -0.291 5.291 12 C 0.061 3.939 13 H 0.098 0.902 14 C -0.155 4.155 15 C -0.180 4.180 16 C 0.047 3.953 17 H 0.083 0.917 18 O -0.398 6.398 19 C -0.176 4.176 20 C -0.171 4.171 21 H 0.068 0.932 22 H 0.120 0.880 23 H 0.083 0.917 24 H 0.194 0.806 25 H 0.128 0.872 26 H 0.244 0.756 27 H -0.211 1.211 28 H -0.223 1.223 29 H 0.205 0.795 30 H 0.119 0.881 31 H 0.108 0.892 32 H 0.091 0.909 33 H 0.104 0.896 34 H 0.240 0.760 35 H 0.082 0.918 36 H 0.058 0.942 37 H 0.099 0.901 38 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 2.019 -3.728 1.918 4.653 hybrid contribution 0.277 1.203 -1.007 1.593 sum 2.295 -2.525 0.911 3.531 Atomic orbital electron populations 1.22002 0.77645 1.03830 1.01151 1.46324 1.05881 1.01396 1.75655 1.19576 0.85659 0.86719 0.88370 1.68009 1.41539 0.98467 1.23184 1.23103 0.91794 0.95182 0.85714 1.21728 0.96688 0.97903 1.13526 1.24809 1.10223 0.90764 0.90111 1.86477 1.87257 1.46698 1.15830 0.93971 0.72871 0.80259 0.85347 1.23199 1.00692 0.86284 0.87288 1.68020 1.06693 1.31653 1.22701 1.21119 0.93021 0.81061 0.98666 0.90189 1.21814 0.97794 0.97991 0.97853 1.22157 0.98605 1.04652 0.92615 1.21882 0.91088 0.96788 0.85544 0.91718 1.86474 1.39182 1.97044 1.17127 1.22089 0.98008 0.98648 0.98888 1.21966 0.98211 1.04045 0.92892 0.93235 0.88008 0.91717 0.80558 0.87197 0.75581 1.21116 1.22342 0.79457 0.88130 0.89245 0.90940 0.89608 0.76039 0.91804 0.94235 0.90128 0.89340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.09 8.23 127.77 1.05 1.14 16 2 N -0.58 -1.65 2.34 -711.64 -1.67 -3.32 16 3 C 0.55 3.49 7.89 261.49 2.06 5.55 16 4 N -0.59 -4.27 9.22 -197.98 -1.83 -6.10 16 5 C 0.21 0.72 10.99 84.71 0.93 1.65 16 6 C -0.29 -0.05 5.36 -19.69 -0.11 -0.16 16 7 C -0.05 0.10 2.83 71.23 0.20 0.31 16 8 O -0.55 0.79 12.85 -148.98 -1.91 -1.12 16 9 Si 0.77 -2.99 29.88 68.60 2.05 -0.94 16 10 C 0.19 0.05 9.92 84.71 0.84 0.89 16 11 N -0.57 -2.49 7.45 -197.98 -1.48 -3.97 16 12 C 0.16 -0.14 2.93 44.99 0.13 -0.01 16 13 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 14 C -0.12 0.54 4.91 30.59 0.15 0.69 16 15 C -0.14 0.15 4.91 30.60 0.15 0.30 16 16 C 0.11 0.03 3.47 30.60 0.11 0.14 16 17 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 18 O -0.59 -2.04 13.32 -148.98 -1.98 -4.02 16 19 C -0.14 -0.19 5.39 30.59 0.16 -0.02 16 20 C -0.13 0.04 5.23 30.59 0.16 0.20 16 21 H 0.05 0.15 6.70 -2.39 -0.02 0.13 16 22 H 0.10 -0.35 4.95 -2.38 -0.01 -0.36 16 23 H 0.06 0.19 7.54 -2.39 -0.02 0.17 16 24 H 0.18 0.05 8.06 -2.91 -0.02 0.02 16 25 H 0.11 -0.15 7.96 -2.39 -0.02 -0.17 16 26 H 0.39 -3.55 8.70 -74.06 -0.64 -4.19 16 27 H -0.28 -0.27 7.11 99.48 0.71 0.43 16 28 H -0.30 -1.11 7.11 99.48 0.71 -0.41 16 29 H 0.19 -1.09 5.07 -2.91 -0.01 -1.11 16 30 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 31 H 0.09 -0.56 6.89 -2.39 -0.02 -0.58 16 32 H 0.07 -0.07 8.14 -2.39 -0.02 -0.08 16 33 H 0.09 0.09 3.66 -2.39 -0.01 0.08 16 34 H 0.39 -1.43 9.08 -74.06 -0.67 -2.10 16 35 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 36 H 0.04 0.28 7.60 -2.39 -0.02 0.26 16 37 H 0.08 0.25 5.86 -2.39 -0.01 0.23 16 38 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 Total: 0.00 -16.59 292.27 -1.15 -17.74 By element: Atomic # 1 Polarization: -8.76 SS G_CDS: -0.18 Total: -8.94 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 5.85 Total: 10.67 kcal Atomic # 7 Polarization: -8.41 SS G_CDS: -4.97 Total: -13.38 kcal Atomic # 8 Polarization: -1.24 SS G_CDS: -3.90 Total: -5.14 kcal Atomic # 14 Polarization: -2.99 SS G_CDS: 2.05 Total: -0.94 kcal Total: -16.59 -1.15 -17.74 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15557738_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.716 kcal (2) G-P(sol) polarization free energy of solvation -16.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.736 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.980 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds