Wall clock time and date at job start Tue Mar 9 2021 13:23:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30836 * 125.96161 * 2 1 4 4 C 1.33235 * 109.82758 * 180.02562 * 3 2 1 5 5 C 1.50701 * 125.52709 * 180.02562 * 4 3 2 6 6 H 1.08999 * 109.47083 * 0.02562 * 5 4 3 7 7 C 1.52997 * 109.47108 * 120.00210 * 5 4 3 8 8 C 1.52997 * 109.47190 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.47200 * 299.99927 * 8 7 5 10 10 H 1.09005 * 109.47150 * 299.99884 * 9 8 7 11 11 N 1.46496 * 109.47219 * 180.02562 * 9 8 7 12 12 C 1.38610 * 120.00077 * 85.00115 * 11 9 8 13 13 N 1.29692 * 124.95236 * 180.27488 * 12 11 9 14 14 C 1.32113 * 116.86761 * 180.22528 * 13 12 11 15 15 C 1.50702 * 122.71268 * 179.75709 * 14 13 12 16 16 O 1.42900 * 109.46941 * 293.25151 * 15 14 13 17 17 Si 1.86308 * 109.46960 * 53.24789 * 15 14 13 18 18 C 1.33332 * 114.58184 * 359.48683 * 14 13 12 19 19 C 1.50695 * 125.95359 * 180.28866 * 18 14 13 20 20 S 1.70964 * 124.95078 * 359.97399 * 12 11 9 21 21 C 1.53001 * 109.47198 * 59.99658 * 9 8 7 22 22 C 1.52992 * 109.47231 * 300.00603 * 21 9 8 23 23 N 1.30718 * 108.94957 * 0.26891 * 4 3 2 24 24 N 1.34422 * 125.96201 * 180.02562 * 2 1 3 25 25 H 1.08999 * 109.46868 * 89.99198 * 1 2 3 26 26 H 1.08998 * 109.47444 * 209.99612 * 1 2 3 27 27 H 1.09008 * 109.47065 * 329.99982 * 1 2 3 28 28 H 1.09002 * 109.47155 * 300.00149 * 7 5 4 29 29 H 1.08998 * 109.47581 * 60.00291 * 7 5 4 30 30 H 1.09006 * 109.47676 * 180.02562 * 8 7 5 31 31 H 1.09001 * 109.47687 * 59.99897 * 8 7 5 32 32 H 0.97002 * 120.00052 * 264.99815 * 11 9 8 33 33 H 1.08994 * 109.47506 * 173.24738 * 15 14 13 34 34 H 0.96705 * 114.00009 * 59.99810 * 16 15 14 35 35 H 1.48496 * 109.99748 * 179.97438 * 17 15 14 36 36 H 1.48495 * 110.00042 * 301.32394 * 17 15 14 37 37 H 1.08997 * 109.47428 * 84.88466 * 19 18 14 38 38 H 1.09005 * 109.47242 * 204.88428 * 19 18 14 39 39 H 1.09005 * 109.47322 * 324.88233 * 19 18 14 40 40 H 1.08999 * 109.46499 * 60.00190 * 21 9 8 41 41 H 1.08996 * 109.47268 * 179.97438 * 21 9 8 42 42 H 1.08998 * 109.47084 * 179.97438 * 22 21 9 43 43 H 1.09001 * 109.47458 * 299.99569 * 22 21 9 44 44 H 0.97000 * 126.82018 * 359.97182 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0590 0.0000 4 6 3.5552 0.6888 -0.0006 5 6 4.7372 1.6236 -0.0002 6 1 4.3848 2.6550 0.0011 7 6 5.5850 1.3733 1.2486 8 6 6.7847 2.3228 1.2493 9 6 7.6320 2.0750 -0.0003 10 1 7.9849 1.0436 -0.0013 11 7 8.7810 2.9837 0.0007 12 6 9.9347 2.6415 0.6887 13 7 11.0032 3.3733 0.7578 14 6 12.0148 2.8883 1.4556 15 6 13.3196 3.6248 1.6178 16 8 13.9815 3.7051 0.3540 17 14 12.9873 5.3437 2.2551 18 6 11.7862 1.6972 2.0094 19 6 12.7552 0.9157 2.8586 20 16 10.1538 1.1965 1.5758 21 6 6.7843 2.3251 -1.2492 22 6 5.5846 1.3757 -1.2498 23 7 3.6194 -0.6168 -0.0067 24 7 2.2964 -1.0880 -0.0005 25 1 -0.3633 0.0001 -1.0277 26 1 -0.3634 -0.8900 0.5137 27 1 -0.3634 0.8901 0.5139 28 1 4.9815 1.5503 2.1389 29 1 5.9375 0.3419 1.2478 30 1 7.3890 2.1443 2.1388 31 1 6.4319 3.3542 1.2504 32 1 8.7346 3.8249 -0.4801 33 1 13.9526 3.0907 2.3263 34 1 13.4748 4.1688 -0.3267 35 1 14.2662 6.0801 2.4200 36 1 12.0991 6.0715 1.3137 37 1 12.6867 1.2537 3.8926 38 1 12.5104 -0.1453 2.8063 39 1 13.7693 1.0731 2.4912 40 1 6.4314 3.3565 -1.2481 41 1 7.3880 2.1490 -2.1394 42 1 4.9804 1.5543 -2.1393 43 1 5.9373 0.3444 -1.2509 44 1 2.0093 -2.0146 -0.0005 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15608010_15704122.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:44 Heat of formation + Delta-G solvation = 86.479635 kcal Electronic energy + Delta-G solvation = -26265.956335 eV Core-core repulsion = 22540.579600 eV Total energy + Delta-G solvation = -3725.376736 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.136 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -43.19970 -40.99322 -40.10283 -37.61608 -36.41787 -34.12654 -33.37204 -32.98025 -31.99748 -30.62848 -28.98030 -28.48915 -25.72468 -24.93045 -24.16898 -23.60842 -22.46648 -21.60703 -20.88054 -20.15071 -19.05018 -18.89376 -17.89062 -17.36642 -16.97520 -16.73809 -16.30172 -15.92037 -15.69780 -15.43942 -15.33928 -15.23028 -14.92763 -14.38400 -14.20179 -14.08134 -14.00875 -13.87310 -13.73430 -13.62584 -13.45634 -13.36788 -12.93824 -12.83513 -12.46752 -12.36017 -12.24781 -12.16109 -11.77752 -11.66285 -11.55473 -11.05473 -11.01087 -10.90554 -10.56710 -10.42613 -10.34832 -9.91217 -8.55623 -4.80665 0.09936 0.26379 0.56950 0.86596 1.40112 1.60993 1.84456 1.86758 1.92156 1.95673 2.25647 2.85097 3.38969 3.46389 3.50957 3.56338 3.67004 3.72869 3.94352 4.00836 4.05861 4.11742 4.21015 4.25067 4.27881 4.29893 4.33821 4.41800 4.53458 4.60521 4.62569 4.70475 4.70844 4.81253 4.92609 4.97331 4.99802 5.00642 5.01770 5.15034 5.23193 5.26899 5.30569 5.44686 5.67127 6.01659 6.34915 6.50859 7.02336 7.09499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.285 3.715 3 N -0.539 5.539 4 C 0.235 3.765 5 C 0.006 3.994 6 H 0.101 0.899 7 C -0.106 4.106 8 C -0.135 4.135 9 C 0.151 3.849 10 H 0.084 0.916 11 N -0.691 5.691 12 C 0.322 3.678 13 N -0.550 5.550 14 C 0.075 3.925 15 C -0.036 4.036 16 O -0.526 6.526 17 Si 0.698 3.302 18 C -0.245 4.245 19 C -0.072 4.072 20 S 0.105 5.895 21 C -0.122 4.122 22 C -0.105 4.105 23 N -0.310 5.310 24 N -0.483 5.483 25 H 0.094 0.906 26 H 0.084 0.916 27 H 0.100 0.900 28 H 0.072 0.928 29 H 0.074 0.926 30 H 0.073 0.927 31 H 0.075 0.925 32 H 0.412 0.588 33 H 0.121 0.879 34 H 0.380 0.620 35 H -0.258 1.258 36 H -0.251 1.251 37 H 0.076 0.924 38 H 0.067 0.933 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.078 0.922 42 H 0.074 0.926 43 H 0.075 0.925 44 H 0.441 0.559 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.297 -2.952 1.741 7.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.006 3.994 3 N -0.269 5.269 4 C -0.048 4.048 5 C -0.016 4.016 6 H 0.119 0.881 7 C -0.145 4.145 8 C -0.174 4.174 9 C 0.046 3.954 10 H 0.102 0.898 11 N -0.330 5.330 12 C -0.050 4.050 13 N -0.276 5.276 14 C -0.056 4.056 15 C -0.148 4.148 16 O -0.333 6.333 17 Si 0.597 3.403 18 C -0.368 4.368 19 C -0.131 4.131 20 S 0.353 5.647 21 C -0.160 4.160 22 C -0.144 4.144 23 N -0.139 5.139 24 N -0.202 5.202 25 H 0.112 0.888 26 H 0.103 0.897 27 H 0.118 0.882 28 H 0.091 0.909 29 H 0.093 0.907 30 H 0.092 0.908 31 H 0.094 0.906 32 H 0.250 0.750 33 H 0.139 0.861 34 H 0.228 0.772 35 H -0.183 1.183 36 H -0.175 1.175 37 H 0.095 0.905 38 H 0.086 0.914 39 H 0.097 0.903 40 H 0.096 0.904 41 H 0.096 0.904 42 H 0.092 0.908 43 H 0.094 0.906 44 H 0.287 0.713 Dipole moment (debyes) X Y Z Total from point charges -5.974 -2.933 1.827 6.901 hybrid contribution 0.144 -0.103 -1.422 1.433 sum -5.830 -3.036 0.405 6.586 Atomic orbital electron populations 1.20438 0.83457 1.05251 1.04792 1.24454 0.96735 0.82817 0.95356 1.70398 1.01389 1.29557 1.25516 1.24132 0.93071 0.90096 0.97479 1.19625 0.88608 0.96971 0.96348 0.88082 1.21523 0.95650 1.00419 0.96939 1.22060 0.96491 1.00861 0.97974 1.21212 0.84808 0.93333 0.96085 0.89846 1.44064 1.09847 1.24110 1.55028 1.23277 0.90793 0.94445 0.96448 1.66054 1.00053 1.34804 1.26716 1.19971 0.95505 0.93181 0.96894 1.24624 0.90105 1.10270 0.89845 1.86563 1.46497 1.79422 1.20781 0.94762 0.81443 0.74352 0.89731 1.25096 0.98928 1.00441 1.12384 1.20192 0.96460 0.98589 0.97879 1.83980 1.11800 1.20227 1.48657 1.21753 0.96351 1.01019 0.96904 1.21506 0.95450 1.00365 0.97106 1.77983 0.96631 1.12334 1.26928 1.48031 1.04353 1.10171 1.57604 0.88798 0.89697 0.88172 0.90914 0.90719 0.90825 0.90586 0.75043 0.86093 0.77207 1.18256 1.17524 0.90508 0.91366 0.90309 0.90441 0.90359 0.90750 0.90612 0.71335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.31 10.51 36.01 0.38 0.69 16 2 C 0.28 0.07 8.24 -155.70 -1.28 -1.21 16 3 N -0.54 -1.55 11.19 -8.16 -0.09 -1.64 16 4 C 0.24 0.53 6.65 -156.85 -1.04 -0.51 16 5 C 0.01 0.00 2.66 -91.77 -0.24 -0.25 16 6 H 0.10 -0.04 8.14 -51.93 -0.42 -0.47 16 7 C -0.11 0.10 5.19 -26.73 -0.14 -0.04 16 8 C -0.13 0.21 5.51 -26.73 -0.15 0.06 16 9 C 0.15 -0.23 2.40 -67.93 -0.16 -0.39 16 10 H 0.08 -0.08 7.25 -51.93 -0.38 -0.45 16 11 N -0.69 0.08 5.23 -55.78 -0.29 -0.21 16 12 C 0.32 0.69 8.22 -87.68 -0.72 -0.03 16 13 N -0.55 -2.01 9.76 -11.36 -0.11 -2.12 16 14 C 0.07 0.22 5.20 -84.18 -0.44 -0.22 16 15 C -0.04 -0.07 2.84 36.01 0.10 0.03 16 16 O -0.53 -1.91 12.88 -35.23 -0.45 -2.36 16 17 Si 0.70 1.03 32.61 -169.99 -5.54 -4.51 16 18 C -0.25 -0.47 6.57 -36.02 -0.24 -0.71 16 19 C -0.07 0.03 9.71 36.00 0.35 0.38 16 20 S 0.10 0.13 21.68 -107.50 -2.33 -2.20 16 21 C -0.12 0.29 5.39 -26.73 -0.14 0.14 16 22 C -0.11 0.13 5.19 -26.73 -0.14 -0.01 16 23 N -0.31 -0.76 12.80 32.42 0.41 -0.35 16 24 N -0.48 0.03 7.45 32.62 0.24 0.27 16 25 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 26 H 0.08 -0.50 8.14 -51.93 -0.42 -0.92 16 27 H 0.10 -0.37 8.14 -51.92 -0.42 -0.79 16 28 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.07 -0.06 8.04 -51.93 -0.42 -0.48 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.41 -0.32 8.73 -40.82 -0.36 -0.67 16 33 H 0.12 0.04 6.33 -51.93 -0.33 -0.29 16 34 H 0.38 0.72 8.70 45.56 0.40 1.12 16 35 H -0.26 -0.98 7.11 56.52 0.40 -0.58 16 36 H -0.25 -1.15 7.11 56.52 0.40 -0.75 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.08 -0.05 7.17 -51.93 -0.37 -0.42 16 40 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 41 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 44 H 0.44 -1.50 8.96 -182.34 -1.63 -3.13 16 LS Contribution 373.09 15.07 5.62 5.62 Total: 0.00 -8.78 373.09 -14.19 -22.98 By element: Atomic # 1 Polarization: -5.63 SS G_CDS: -7.78 Total: -13.42 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -3.87 Total: -2.06 kcal Atomic # 7 Polarization: -4.21 SS G_CDS: 0.16 Total: -4.04 kcal Atomic # 8 Polarization: -1.91 SS G_CDS: -0.45 Total: -2.36 kcal Atomic # 14 Polarization: 1.03 SS G_CDS: -5.54 Total: -4.51 kcal Atomic # 16 Polarization: 0.13 SS G_CDS: -2.33 Total: -2.20 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -8.78 -14.19 -22.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15608010_15704122.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.455 kcal (2) G-P(sol) polarization free energy of solvation -8.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.975 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.480 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds