Wall clock time and date at job start Tue Mar 9 2021 13:32:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86296 * 109.47097 * 2 1 4 4 C 1.50703 * 109.46994 * 120.00028 * 2 1 3 5 5 C 1.37986 * 120.32676 * 244.99907 * 4 2 1 6 6 N 1.32001 * 120.90097 * 179.97438 * 5 4 2 7 7 C 1.32335 * 121.64780 * 0.02562 * 6 5 4 8 8 N 1.39145 * 119.71867 * 179.97438 * 7 6 5 9 9 C 1.46505 * 120.00074 * 359.97438 * 8 7 6 10 10 H 1.08996 * 112.90367 * 26.82966 * 9 8 7 11 11 C 1.53776 * 113.61620 * 158.08599 * 9 8 7 12 12 C 1.53788 * 87.08062 * 89.11365 * 11 9 8 13 13 H 1.09004 * 113.60858 * 139.98375 * 12 11 9 14 14 N 1.46491 * 113.61487 * 270.80057 * 12 11 9 15 15 C 1.34952 * 126.03758 * 154.77197 * 14 12 11 16 16 C 1.35310 * 107.74669 * 179.97438 * 15 14 12 17 17 C 1.39866 * 107.92381 * 359.97438 * 16 15 14 18 18 N 1.30835 * 108.20210 * 359.74586 * 17 16 15 19 19 C 1.53783 * 87.07932 * 25.43527 * 12 11 9 20 20 C 1.39340 * 120.56637 * 0.25546 * 7 6 5 21 21 F 1.35098 * 120.47869 * 179.72422 * 20 7 6 22 22 C 1.38449 * 119.05047 * 359.49229 * 20 7 6 23 23 H 0.96701 * 114.00323 * 299.99694 * 1 2 3 24 24 H 1.08999 * 109.47017 * 239.99967 * 2 1 3 25 25 H 1.48501 * 110.00088 * 178.68111 * 3 2 1 26 26 H 1.48500 * 110.00069 * 300.00017 * 3 2 1 27 27 H 1.08003 * 119.54856 * 0.02562 * 5 4 2 28 28 H 0.97004 * 120.00487 * 180.02562 * 8 7 6 29 29 H 1.09004 * 113.61382 * 334.56751 * 11 9 8 30 30 H 1.08996 * 113.61864 * 203.66339 * 11 9 8 31 31 H 1.08000 * 126.12064 * 359.97438 * 15 14 12 32 32 H 1.08004 * 126.04138 * 179.97438 * 16 15 14 33 33 H 1.08006 * 125.89955 * 180.02562 * 17 16 15 34 34 H 1.08999 * 113.61752 * 89.11528 * 19 12 11 35 35 H 1.09002 * 113.60842 * 219.93456 * 19 12 11 36 36 H 1.08007 * 120.75324 * 180.24519 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6381 -0.0202 2.1938 6 7 3.0829 -0.6310 3.2762 7 6 2.8720 -1.9212 3.4815 8 7 3.3595 -2.5245 4.6367 9 6 4.1033 -1.7320 5.6191 10 1 3.8316 -0.6765 5.6059 11 6 4.1125 -2.3482 7.0279 12 6 5.3800 -3.1079 6.6019 13 1 6.1390 -3.1631 7.3823 14 7 5.1054 -4.4067 5.9825 15 6 5.9068 -5.0569 5.1128 16 6 5.2964 -6.2171 4.7779 17 6 4.0807 -6.2785 5.4668 18 7 3.9678 -5.1965 6.1936 19 6 5.6210 -1.9779 5.5870 20 6 2.1708 -2.6819 2.5482 21 9 1.9613 -4.0001 2.7570 22 6 1.6877 -2.0666 1.4059 23 1 -0.3934 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8900 25 1 3.5345 1.7703 0.0321 26 1 1.5614 2.4679 -1.2085 27 1 2.8293 1.0344 2.0608 28 1 3.2076 -3.4700 4.7913 29 1 3.2600 -2.9979 7.2260 30 1 4.2852 -1.6212 7.8215 31 1 6.8638 -4.7127 4.7494 32 1 5.6802 -6.9640 4.0986 33 1 3.3617 -7.0825 5.4120 34 1 6.2061 -1.1495 5.9865 35 1 5.9876 -2.3285 4.6222 36 1 1.1373 -2.6292 0.6663 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567480_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:53 Heat of formation + Delta-G solvation = 91.630395 kcal Electronic energy + Delta-G solvation = -23341.773626 eV Core-core repulsion = 19745.590409 eV Total energy + Delta-G solvation = -3596.183217 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.82203 -42.47867 -41.38216 -39.95131 -37.95027 -35.50680 -33.20617 -32.41647 -31.09238 -30.84625 -27.06578 -26.83419 -25.93604 -24.64628 -23.03677 -22.27770 -21.81048 -20.29223 -19.55106 -18.58435 -18.22213 -18.06364 -17.52189 -17.03350 -16.90431 -16.22196 -16.07986 -15.81438 -15.41231 -15.35024 -15.07989 -14.75543 -14.61094 -14.32231 -13.98073 -13.83014 -13.78798 -13.48375 -13.31711 -13.02851 -12.60157 -12.21257 -12.09926 -11.85097 -11.53841 -11.25767 -10.70660 -10.66015 -10.46141 -10.33656 -9.53536 -8.76971 -5.10254 -0.06365 0.11838 0.92895 1.21568 1.42415 1.57327 1.87845 1.92458 1.98979 2.53979 2.96724 3.06321 3.13283 3.28569 3.41012 3.55005 3.58835 3.81128 3.84251 3.89622 3.98867 4.07973 4.38481 4.39448 4.43505 4.46216 4.56006 4.62149 4.65302 4.71727 4.81349 4.84957 4.87727 4.97647 5.10533 5.40107 5.70740 5.95836 6.07492 6.19987 6.52218 6.74696 6.95499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.685 3.315 4 C -0.210 4.210 5 C 0.148 3.852 6 N -0.511 5.511 7 C 0.391 3.609 8 N -0.698 5.698 9 C 0.135 3.865 10 H 0.114 0.886 11 C -0.146 4.146 12 C 0.126 3.874 13 H 0.105 0.895 14 N -0.360 5.360 15 C 0.060 3.940 16 C -0.272 4.272 17 C 0.049 3.951 18 N -0.302 5.302 19 C -0.159 4.159 20 C -0.019 4.019 21 F -0.132 7.132 22 C -0.037 4.037 23 H 0.380 0.620 24 H 0.115 0.885 25 H -0.254 1.254 26 H -0.251 1.251 27 H 0.164 0.836 28 H 0.417 0.583 29 H 0.095 0.905 30 H 0.116 0.884 31 H 0.171 0.829 32 H 0.148 0.852 33 H 0.185 0.815 34 H 0.115 0.885 35 H 0.079 0.921 36 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.987 3.024 1.836 4.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.166 4.166 3 Si 0.586 3.414 4 C -0.215 4.215 5 C -0.009 4.009 6 N -0.228 5.228 7 C 0.153 3.847 8 N -0.332 5.332 9 C 0.029 3.971 10 H 0.132 0.868 11 C -0.184 4.184 12 C 0.024 3.976 13 H 0.123 0.877 14 N -0.143 5.143 15 C -0.086 4.086 16 C -0.301 4.301 17 C -0.137 4.137 18 N -0.123 5.123 19 C -0.200 4.200 20 C -0.046 4.046 21 F -0.111 7.111 22 C -0.063 4.063 23 H 0.227 0.773 24 H 0.132 0.868 25 H -0.179 1.179 26 H -0.176 1.176 27 H 0.180 0.820 28 H 0.257 0.743 29 H 0.114 0.886 30 H 0.135 0.865 31 H 0.188 0.812 32 H 0.166 0.834 33 H 0.201 0.799 34 H 0.133 0.867 35 H 0.098 0.902 36 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.415 4.602 2.523 5.778 hybrid contribution 0.245 -2.393 -1.302 2.735 sum 2.661 2.210 1.221 3.668 Atomic orbital electron populations 1.86515 1.17058 1.81689 1.49276 1.24866 0.85246 1.09925 0.96604 0.94887 0.81114 0.77608 0.87786 1.20927 1.05769 0.94630 1.00221 1.22311 0.91764 0.99183 0.87654 1.67276 1.24989 1.07213 1.23343 1.18437 0.90402 0.88962 0.86914 1.44448 1.58215 1.12341 1.18211 1.21828 0.90667 0.97086 0.87543 0.86838 1.23561 0.97887 0.99677 0.97274 1.22258 0.99851 0.79215 0.96322 0.87733 1.48442 1.15100 1.15955 1.34776 1.22476 0.97820 0.94022 0.94306 1.21565 0.98048 1.00686 1.09843 1.23973 0.97882 0.96710 0.95096 1.77320 1.05590 1.05213 1.24180 1.23973 0.98462 0.97739 0.99777 1.18024 1.08592 0.79577 0.98380 1.91506 1.93669 1.30976 1.94931 1.21286 0.95514 0.94459 0.95085 0.77298 0.86761 1.17875 1.17566 0.81990 0.74279 0.88608 0.86539 0.81196 0.83413 0.79851 0.86666 0.90188 0.83294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.15 12.84 -35.23 -0.45 -0.30 16 2 C -0.05 0.05 2.82 36.01 0.10 0.15 16 3 Si 0.68 -1.30 29.83 -169.99 -5.07 -6.38 16 4 C -0.21 -0.02 5.36 -104.47 -0.56 -0.58 16 5 C 0.15 0.00 9.84 -17.57 -0.17 -0.17 16 6 N -0.51 -0.94 9.17 -12.37 -0.11 -1.05 16 7 C 0.39 1.04 7.49 -154.86 -1.16 -0.12 16 8 N -0.70 -1.33 5.26 -53.06 -0.28 -1.60 16 9 C 0.14 -0.06 4.31 -67.12 -0.29 -0.34 16 10 H 0.11 -0.05 7.49 -51.93 -0.39 -0.44 16 11 C -0.15 0.21 7.44 -25.92 -0.19 0.01 16 12 C 0.13 -0.15 4.89 -67.12 -0.33 -0.48 16 13 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 14 N -0.36 -0.41 2.78 -54.07 -0.15 -0.56 16 15 C 0.06 0.03 11.01 -17.22 -0.19 -0.15 16 16 C -0.27 -0.29 10.80 -40.02 -0.43 -0.72 16 17 C 0.05 0.09 12.03 -17.37 -0.21 -0.12 16 18 N -0.30 -0.86 10.38 30.62 0.32 -0.55 16 19 C -0.16 0.31 7.54 -25.92 -0.20 0.11 16 20 C -0.02 -0.06 7.35 -39.09 -0.29 -0.34 16 21 F -0.13 -0.54 16.65 2.25 0.04 -0.50 16 22 C -0.04 -0.05 9.82 -39.26 -0.39 -0.44 16 23 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 24 H 0.12 -0.06 7.96 -51.93 -0.41 -0.48 16 25 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 26 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 27 H 0.16 -0.43 4.91 -52.48 -0.26 -0.69 16 28 H 0.42 1.22 5.92 -40.82 -0.24 0.98 16 29 H 0.10 0.07 7.51 -51.93 -0.39 -0.32 16 30 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 31 H 0.17 -0.34 8.06 -52.49 -0.42 -0.76 16 32 H 0.15 -0.08 8.06 -52.48 -0.42 -0.50 16 33 H 0.18 -0.12 8.06 -52.48 -0.42 -0.54 16 34 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 35 H 0.08 -0.04 7.81 -51.93 -0.41 -0.45 16 36 H 0.15 0.07 8.06 -52.48 -0.42 -0.35 16 LS Contribution 308.79 15.07 4.65 4.65 Total: 0.00 -7.02 308.79 -9.22 -16.24 By element: Atomic # 1 Polarization: -2.91 SS G_CDS: -3.86 Total: -6.77 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -4.30 Total: -3.19 kcal Atomic # 7 Polarization: -3.53 SS G_CDS: -0.23 Total: -3.76 kcal Atomic # 8 Polarization: 0.15 SS G_CDS: -0.45 Total: -0.30 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.07 Total: -6.38 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -7.02 -9.22 -16.24 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567480_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.869 kcal (2) G-P(sol) polarization free energy of solvation -7.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.239 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds