Wall clock time and date at job start Tue Mar 9 2021 13:32:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86296 * 109.47097 * 2 1 4 4 C 1.50703 * 109.46994 * 120.00028 * 2 1 3 5 5 C 1.37986 * 120.32676 * 244.99907 * 4 2 1 6 6 N 1.32001 * 120.90097 * 179.97438 * 5 4 2 7 7 C 1.32335 * 121.64780 * 0.02562 * 6 5 4 8 8 N 1.39145 * 119.71867 * 179.97438 * 7 6 5 9 9 C 1.46505 * 120.00074 * 359.97438 * 8 7 6 10 10 H 1.08996 * 112.90367 * 26.82966 * 9 8 7 11 11 C 1.53776 * 113.61620 * 158.08599 * 9 8 7 12 12 C 1.53788 * 87.08062 * 89.11365 * 11 9 8 13 13 H 1.09004 * 113.60858 * 139.98375 * 12 11 9 14 14 N 1.46491 * 113.61487 * 270.80057 * 12 11 9 15 15 C 1.34952 * 126.03758 * 154.77197 * 14 12 11 16 16 C 1.35310 * 107.74669 * 179.97438 * 15 14 12 17 17 C 1.39866 * 107.92381 * 359.97438 * 16 15 14 18 18 N 1.30835 * 108.20210 * 359.74586 * 17 16 15 19 19 C 1.53783 * 87.07932 * 25.43527 * 12 11 9 20 20 C 1.39340 * 120.56637 * 0.25546 * 7 6 5 21 21 F 1.35098 * 120.47869 * 179.72422 * 20 7 6 22 22 C 1.38449 * 119.05047 * 359.49229 * 20 7 6 23 23 H 0.96701 * 114.00323 * 299.99694 * 1 2 3 24 24 H 1.08999 * 109.47017 * 239.99967 * 2 1 3 25 25 H 1.48501 * 110.00088 * 178.68111 * 3 2 1 26 26 H 1.48500 * 110.00069 * 300.00017 * 3 2 1 27 27 H 1.08003 * 119.54856 * 0.02562 * 5 4 2 28 28 H 0.97004 * 120.00487 * 180.02562 * 8 7 6 29 29 H 1.09004 * 113.61382 * 334.56751 * 11 9 8 30 30 H 1.08996 * 113.61864 * 203.66339 * 11 9 8 31 31 H 1.08000 * 126.12064 * 359.97438 * 15 14 12 32 32 H 1.08004 * 126.04138 * 179.97438 * 16 15 14 33 33 H 1.08006 * 125.89955 * 180.02562 * 17 16 15 34 34 H 1.08999 * 113.61752 * 89.11528 * 19 12 11 35 35 H 1.09002 * 113.60842 * 219.93456 * 19 12 11 36 36 H 1.08007 * 120.75324 * 180.24519 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6381 -0.0202 2.1938 6 7 3.0829 -0.6310 3.2762 7 6 2.8720 -1.9212 3.4815 8 7 3.3595 -2.5245 4.6367 9 6 4.1033 -1.7320 5.6191 10 1 3.8316 -0.6765 5.6059 11 6 4.1125 -2.3482 7.0279 12 6 5.3800 -3.1079 6.6019 13 1 6.1390 -3.1631 7.3823 14 7 5.1054 -4.4067 5.9825 15 6 5.9068 -5.0569 5.1128 16 6 5.2964 -6.2171 4.7779 17 6 4.0807 -6.2785 5.4668 18 7 3.9678 -5.1965 6.1936 19 6 5.6210 -1.9779 5.5870 20 6 2.1708 -2.6819 2.5482 21 9 1.9613 -4.0001 2.7570 22 6 1.6877 -2.0666 1.4059 23 1 -0.3934 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8900 25 1 3.5345 1.7703 0.0321 26 1 1.5614 2.4679 -1.2085 27 1 2.8293 1.0344 2.0608 28 1 3.2076 -3.4700 4.7913 29 1 3.2600 -2.9979 7.2260 30 1 4.2852 -1.6212 7.8215 31 1 6.8638 -4.7127 4.7494 32 1 5.6802 -6.9640 4.0986 33 1 3.3617 -7.0825 5.4120 34 1 6.2061 -1.1495 5.9865 35 1 5.9876 -2.3285 4.6222 36 1 1.1373 -2.6292 0.6663 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17567480_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:53 Heat of formation + Delta-G solvation = 94.471510 kcal Electronic energy + Delta-G solvation = -23341.650426 eV Core-core repulsion = 19745.590409 eV Total energy + Delta-G solvation = -3596.060017 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -50.03996 -42.47712 -41.44445 -39.90335 -37.92051 -35.53097 -33.28113 -32.44588 -31.13602 -30.87774 -26.97844 -26.77970 -25.92805 -24.69562 -23.08892 -22.29601 -21.84080 -20.27635 -19.59166 -18.60381 -18.32185 -18.03675 -17.56069 -17.11010 -16.91529 -16.23807 -16.08597 -15.81237 -15.44688 -15.41471 -15.11050 -14.82511 -14.60288 -14.35146 -14.07433 -13.77596 -13.75160 -13.50890 -13.20715 -12.94728 -12.57018 -12.18786 -12.13112 -11.79774 -11.56907 -11.23975 -10.78895 -10.74356 -10.43416 -10.37552 -9.56235 -8.84164 -4.97500 -0.14899 0.03066 0.89733 1.30973 1.48302 1.66927 1.82436 1.93907 2.00349 2.46655 2.96319 3.07327 3.17726 3.31803 3.45455 3.64470 3.65112 3.80283 3.89272 3.94572 4.02032 4.10005 4.37000 4.43465 4.48660 4.62279 4.65349 4.67037 4.71566 4.78165 4.83932 4.92867 4.93048 4.93452 5.08460 5.36060 5.67033 5.93277 6.08098 6.12321 6.69172 6.77501 6.85441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.062 4.062 3 Si 0.779 3.221 4 C -0.206 4.206 5 C 0.151 3.849 6 N -0.518 5.518 7 C 0.381 3.619 8 N -0.703 5.703 9 C 0.124 3.876 10 H 0.115 0.885 11 C -0.139 4.139 12 C 0.117 3.883 13 H 0.123 0.877 14 N -0.362 5.362 15 C 0.056 3.944 16 C -0.287 4.287 17 C 0.034 3.966 18 N -0.331 5.331 19 C -0.144 4.144 20 C -0.047 4.047 21 F -0.146 7.146 22 C -0.039 4.039 23 H 0.396 0.604 24 H 0.110 0.890 25 H -0.278 1.278 26 H -0.296 1.296 27 H 0.191 0.809 28 H 0.410 0.590 29 H 0.071 0.929 30 H 0.144 0.856 31 H 0.194 0.806 32 H 0.159 0.841 33 H 0.197 0.803 34 H 0.143 0.857 35 H 0.066 0.934 36 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.823 4.459 2.172 5.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.172 4.172 3 Si 0.684 3.316 4 C -0.211 4.211 5 C -0.006 4.006 6 N -0.235 5.235 7 C 0.143 3.857 8 N -0.336 5.336 9 C 0.018 3.982 10 H 0.133 0.867 11 C -0.177 4.177 12 C 0.015 3.985 13 H 0.140 0.860 14 N -0.144 5.144 15 C -0.091 4.091 16 C -0.317 4.317 17 C -0.151 4.151 18 N -0.153 5.153 19 C -0.184 4.184 20 C -0.073 4.073 21 F -0.125 7.125 22 C -0.065 4.065 23 H 0.246 0.754 24 H 0.128 0.872 25 H -0.205 1.205 26 H -0.224 1.224 27 H 0.207 0.793 28 H 0.249 0.751 29 H 0.090 0.910 30 H 0.162 0.838 31 H 0.211 0.789 32 H 0.177 0.823 33 H 0.213 0.787 34 H 0.161 0.839 35 H 0.085 0.915 36 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 3.238 6.024 2.899 7.429 hybrid contribution -0.041 -2.799 -1.464 3.159 sum 3.197 3.226 1.435 4.763 Atomic orbital electron populations 1.86482 1.17255 1.82192 1.50498 1.25068 0.85231 1.10981 0.95898 0.93805 0.78001 0.74406 0.85417 1.21030 1.05453 0.94050 1.00565 1.22783 0.90642 1.00292 0.86867 1.67349 1.25379 1.06751 1.24042 1.18592 0.90588 0.89359 0.87182 1.44599 1.58365 1.12194 1.18447 1.22047 0.91636 0.96872 0.87615 0.86694 1.23598 0.96894 0.99693 0.97488 1.22535 1.00362 0.78567 0.96991 0.85970 1.48655 1.14591 1.16444 1.34727 1.22916 0.98503 0.93817 0.93837 1.21821 0.98044 1.01466 1.10323 1.24317 0.98622 0.96969 0.95207 1.77261 1.06868 1.05927 1.25231 1.23953 0.97385 0.98055 0.99001 1.18270 1.10250 0.79290 0.99526 1.91460 1.93948 1.31963 1.95123 1.21440 0.95242 0.95181 0.94663 0.75410 0.87249 1.20488 1.22391 0.79283 0.75125 0.91032 0.83801 0.78871 0.82334 0.78667 0.83896 0.91484 0.82949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.56 12.84 -148.98 -1.91 -1.35 16 2 C -0.06 0.13 2.82 71.24 0.20 0.33 16 3 Si 0.78 -3.67 29.83 68.60 2.05 -1.63 16 4 C -0.21 0.00 5.36 -19.76 -0.11 -0.10 16 5 C 0.15 -0.11 9.84 84.61 0.83 0.73 16 6 N -0.52 -1.84 9.17 -193.04 -1.77 -3.61 16 7 C 0.38 2.40 7.49 133.08 1.00 3.40 16 8 N -0.70 -3.46 5.26 -321.79 -1.69 -5.15 16 9 C 0.12 -0.11 4.31 45.52 0.20 0.09 16 10 H 0.12 -0.16 7.49 -2.39 -0.02 -0.18 16 11 C -0.14 0.41 7.44 31.12 0.23 0.64 16 12 C 0.12 -0.33 4.89 45.52 0.22 -0.11 16 13 H 0.12 -0.78 8.14 -2.38 -0.02 -0.80 16 14 N -0.36 -1.02 2.78 -324.99 -0.90 -1.92 16 15 C 0.06 0.09 11.01 83.54 0.92 1.01 16 16 C -0.29 -0.89 10.80 21.99 0.24 -0.66 16 17 C 0.03 0.17 12.03 85.24 1.02 1.20 16 18 N -0.33 -2.40 10.38 -57.02 -0.59 -2.99 16 19 C -0.14 0.69 7.54 31.12 0.23 0.93 16 20 C -0.05 -0.35 7.35 22.59 0.17 -0.18 16 21 F -0.15 -1.54 16.65 44.97 0.75 -0.80 16 22 C -0.04 -0.14 9.82 22.48 0.22 0.08 16 23 H 0.40 -3.56 8.70 -74.06 -0.64 -4.21 16 24 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 25 H -0.28 0.13 7.11 99.48 0.71 0.84 16 26 H -0.30 -0.90 7.11 99.48 0.71 -0.19 16 27 H 0.19 -1.35 4.91 -2.91 -0.01 -1.36 16 28 H 0.41 3.16 5.92 -92.71 -0.55 2.61 16 29 H 0.07 0.19 7.51 -2.38 -0.02 0.17 16 30 H 0.14 -1.29 8.14 -2.39 -0.02 -1.31 16 31 H 0.19 -0.86 8.06 -2.91 -0.02 -0.88 16 32 H 0.16 -0.04 8.06 -2.91 -0.02 -0.07 16 33 H 0.20 0.12 8.06 -2.91 -0.02 0.10 16 34 H 0.14 -1.50 8.14 -2.39 -0.02 -1.51 16 35 H 0.07 -0.10 7.81 -2.39 -0.02 -0.12 16 36 H 0.15 0.33 8.06 -2.91 -0.02 0.30 16 Total: 0.00 -18.14 308.79 1.28 -16.85 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -0.02 Total: -6.76 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: 5.38 Total: 7.35 kcal Atomic # 7 Polarization: -8.72 SS G_CDS: -4.96 Total: -13.68 kcal Atomic # 8 Polarization: 0.56 SS G_CDS: -1.91 Total: -1.35 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 0.75 Total: -0.80 kcal Atomic # 14 Polarization: -3.67 SS G_CDS: 2.05 Total: -1.63 kcal Total: -18.14 1.28 -16.85 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567480_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.326 kcal (2) G-P(sol) polarization free energy of solvation -18.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.854 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds