Wall clock time and date at job start Tue Mar 9 2021 13:34:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33324 * 125.95530 * 2 1 4 4 C 1.50702 * 122.70785 * 0.23440 * 3 2 1 5 5 O 1.42902 * 109.47513 * 44.75986 * 4 3 2 6 6 Si 1.86293 * 109.47147 * 164.76406 * 4 3 2 7 7 N 1.32114 * 114.58178 * 179.97438 * 3 2 1 8 8 C 1.29694 * 116.86629 * 0.02562 * 7 3 2 9 9 N 1.38604 * 124.94858 * 179.97438 * 8 7 3 10 10 C 1.46506 * 119.99974 * 180.02562 * 9 8 7 11 11 C 1.52994 * 109.47146 * 179.97438 * 10 9 8 12 12 H 1.09004 * 112.85313 * 45.33373 * 11 10 9 13 13 C 1.53784 * 113.61515 * 176.52739 * 11 10 9 14 14 C 1.53790 * 87.08090 * 89.11711 * 13 11 10 15 15 O 1.42898 * 113.61192 * 270.80370 * 14 13 11 16 16 C 1.52998 * 113.61402 * 139.98268 * 14 13 11 17 17 F 1.39899 * 109.46924 * 60.00022 * 16 14 13 18 18 F 1.39898 * 109.46872 * 180.02562 * 16 14 13 19 19 F 1.39901 * 109.47089 * 300.00271 * 16 14 13 20 20 C 1.53784 * 113.61822 * 274.13751 * 11 10 9 21 21 S 1.70967 * 110.10113 * 359.97438 * 8 7 3 22 22 H 1.09002 * 109.46466 * 84.23915 * 1 2 3 23 23 H 1.08992 * 109.47544 * 204.23907 * 1 2 3 24 24 H 1.09001 * 109.47039 * 324.24681 * 1 2 3 25 25 H 1.09000 * 109.46655 * 284.76041 * 4 3 2 26 26 H 0.96699 * 113.99949 * 180.02562 * 5 4 3 27 27 H 1.48502 * 110.00014 * 299.99538 * 6 4 3 28 28 H 1.48496 * 110.00285 * 61.31312 * 6 4 3 29 29 H 0.97006 * 120.00411 * 359.97438 * 9 8 7 30 30 H 1.08993 * 109.46912 * 300.00057 * 10 9 8 31 31 H 1.09003 * 109.46681 * 60.00116 * 10 9 8 32 32 H 1.08994 * 113.61928 * 203.66234 * 13 11 10 33 33 H 1.09002 * 113.61311 * 334.48958 * 13 11 10 34 34 H 0.96699 * 113.99289 * 179.97438 * 15 14 13 35 35 H 1.08996 * 113.61123 * 25.42853 * 20 11 10 36 36 H 1.08992 * 113.61733 * 156.33528 * 20 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2899 1.0792 0.0000 4 6 1.7415 2.4829 0.0052 5 8 0.6803 2.5764 0.9576 6 14 3.0956 3.6769 0.4651 7 7 3.5850 0.8187 0.0005 8 6 3.9315 -0.4311 0.0005 9 7 5.2384 -0.8928 0.0005 10 6 5.5065 -2.3331 -0.0002 11 6 7.0179 -2.5705 -0.0007 12 1 7.5458 -1.9389 0.7138 13 6 7.4082 -4.0556 0.0840 14 6 7.3506 -4.0772 -1.4527 15 8 6.0586 -4.3973 -1.9726 16 6 8.4701 -4.8977 -2.0965 17 9 8.3885 -6.2233 -1.6569 18 9 8.3357 -4.8583 -3.4884 19 9 9.7098 -4.3612 -1.7326 20 6 7.6419 -2.5652 -1.4062 21 16 2.5412 -1.4262 0.0004 22 1 -0.3632 0.1032 -1.0225 23 1 -0.3634 -0.9370 0.4219 24 1 -0.3633 0.8340 0.6005 25 1 1.3622 2.7284 -0.9868 26 1 0.2790 3.4543 1.0145 27 1 3.6213 3.3528 1.8157 28 1 4.1912 3.6123 -0.5352 29 1 5.9756 -0.2623 0.0001 30 1 5.0677 -2.7847 0.8895 31 1 5.0679 -2.7838 -0.8905 32 1 8.4076 -4.2222 0.4857 33 1 6.6514 -4.6796 0.5594 34 1 6.0160 -4.4120 -2.9385 35 1 7.0730 -1.9870 -2.1342 36 1 8.7050 -2.3250 -1.4110 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17664668_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:32 Heat of formation + Delta-G solvation = -150.953150 kcal Electronic energy + Delta-G solvation = -25732.911838 eV Core-core repulsion = 21317.764136 eV Total energy + Delta-G solvation = -4415.147701 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.075 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -51.28408 -48.83088 -48.76519 -41.37515 -40.98552 -37.97508 -37.03000 -35.79511 -33.02213 -30.31785 -29.07762 -27.22093 -26.91649 -25.61858 -24.16658 -23.57375 -21.14022 -20.20261 -19.96558 -19.57916 -19.39754 -19.26662 -18.27583 -17.51663 -17.18251 -16.66076 -16.48147 -16.12948 -15.79127 -15.64673 -15.58780 -15.42973 -15.21068 -15.11682 -14.94507 -14.88395 -14.53327 -14.40843 -14.31225 -14.01750 -13.80456 -13.55839 -13.40725 -13.11250 -12.96321 -12.54388 -12.34107 -12.25301 -11.88945 -11.69657 -11.28683 -10.98514 -10.84239 -10.39104 -10.08032 -8.74177 -4.91956 -0.11958 0.03818 0.63993 1.33228 1.48439 1.64319 1.75202 1.78646 2.23363 2.39981 2.54703 2.62724 2.84492 3.15582 3.27679 3.39783 3.44959 3.64087 3.93656 4.07592 4.22177 4.32208 4.33594 4.40371 4.43907 4.51978 4.68613 4.73863 4.77621 4.78671 4.84474 4.97790 5.07547 5.34165 5.48433 6.16469 6.22441 6.75408 6.94944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C -0.240 4.240 3 C 0.073 3.927 4 C -0.037 4.037 5 O -0.554 6.554 6 Si 0.811 3.189 7 N -0.587 5.587 8 C 0.306 3.694 9 N -0.687 5.687 10 C 0.133 3.867 11 C -0.103 4.103 12 H 0.115 0.885 13 C -0.106 4.106 14 C 0.063 3.937 15 O -0.517 6.517 16 C 0.430 3.570 17 F -0.186 7.186 18 F -0.188 7.188 19 F -0.178 7.178 20 C -0.148 4.148 21 S 0.129 5.871 22 H 0.078 0.922 23 H 0.067 0.933 24 H 0.102 0.898 25 H 0.102 0.898 26 H 0.408 0.592 27 H -0.323 1.323 28 H -0.306 1.306 29 H 0.413 0.587 30 H 0.075 0.925 31 H 0.088 0.912 32 H 0.125 0.875 33 H 0.101 0.899 34 H 0.402 0.598 35 H 0.093 0.907 36 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.889 1.897 -0.536 2.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.363 4.363 3 C -0.056 4.056 4 C -0.150 4.150 5 O -0.364 6.364 6 Si 0.720 3.280 7 N -0.316 5.316 8 C -0.065 4.065 9 N -0.328 5.328 10 C 0.010 3.990 11 C -0.122 4.122 12 H 0.133 0.867 13 C -0.144 4.144 14 C 0.020 3.980 15 O -0.326 6.326 16 C 0.376 3.624 17 F -0.167 7.167 18 F -0.170 7.170 19 F -0.159 7.159 20 C -0.186 4.186 21 S 0.377 5.623 22 H 0.096 0.904 23 H 0.086 0.914 24 H 0.120 0.880 25 H 0.120 0.880 26 H 0.261 0.739 27 H -0.252 1.252 28 H -0.235 1.235 29 H 0.252 0.748 30 H 0.093 0.907 31 H 0.106 0.894 32 H 0.144 0.856 33 H 0.120 0.880 34 H 0.255 0.745 35 H 0.111 0.889 36 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -0.770 0.407 0.349 0.938 hybrid contribution 0.741 0.043 -1.049 1.285 sum -0.029 0.450 -0.699 0.832 Atomic orbital electron populations 1.20346 0.85096 1.04096 1.03514 1.25527 1.02565 0.92695 1.15525 1.19428 0.86377 0.96712 1.03078 1.24048 0.99015 0.95062 0.96825 1.86324 1.50668 1.39127 1.60320 0.95409 0.75378 0.82599 0.74595 1.65646 1.18212 1.18005 1.29737 1.23495 0.93074 0.91303 0.98621 1.44040 1.00957 1.08048 1.79788 1.21582 0.96025 0.77854 1.03552 1.22212 0.93791 0.97880 0.98279 0.86723 1.23196 1.05596 0.96324 0.89253 1.23797 0.81844 0.94712 0.97682 1.86584 1.25107 1.92189 1.28767 1.21591 0.84728 0.79360 0.76762 1.93206 1.96325 1.37972 1.89191 1.93177 1.95759 1.96374 1.31641 1.93181 1.45597 1.85758 1.91377 1.23859 1.04174 0.92141 0.98390 1.83837 0.95441 1.09483 1.73502 0.90365 0.91390 0.87973 0.88010 0.73918 1.25240 1.23499 0.74849 0.90718 0.89436 0.85645 0.88047 0.74531 0.88866 0.86486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.15 9.98 71.24 0.71 0.56 16 2 C -0.24 -1.72 6.49 24.58 0.16 -1.56 16 3 C 0.07 0.69 6.03 41.41 0.25 0.94 16 4 C -0.04 -0.10 2.72 71.24 0.19 0.09 16 5 O -0.55 0.25 10.23 -148.98 -1.52 -1.28 16 6 Si 0.81 3.01 31.87 68.60 2.19 5.20 16 7 N -0.59 -7.02 8.60 -189.87 -1.63 -8.65 16 8 C 0.31 2.29 8.24 179.32 1.48 3.76 16 9 N -0.69 -0.92 5.71 -351.01 -2.01 -2.93 16 10 C 0.13 -0.44 5.13 86.38 0.44 0.00 16 11 C -0.10 0.73 3.93 -10.27 -0.04 0.68 16 12 H 0.11 -1.03 8.14 -2.39 -0.02 -1.05 16 13 C -0.11 0.71 6.86 31.12 0.21 0.92 16 14 C 0.06 -0.30 1.36 -10.17 -0.01 -0.31 16 15 O -0.52 2.27 11.43 -148.98 -1.70 0.57 16 16 C 0.43 -0.33 2.85 71.98 0.21 -0.12 16 17 F -0.19 -0.50 17.18 44.97 0.77 0.27 16 18 F -0.19 -0.14 16.65 44.97 0.75 0.61 16 19 F -0.18 0.00 15.76 44.97 0.71 0.71 16 20 C -0.15 1.00 6.93 31.22 0.22 1.21 16 21 S 0.13 0.63 22.32 -56.49 -1.26 -0.63 16 22 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 23 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 24 H 0.10 0.20 5.70 -2.39 -0.01 0.19 16 25 H 0.10 -0.19 7.96 -2.39 -0.02 -0.21 16 26 H 0.41 -4.76 8.74 -74.06 -0.65 -5.40 16 27 H -0.32 -4.48 7.11 99.48 0.71 -3.77 16 28 H -0.31 -3.57 7.11 99.48 0.71 -2.87 16 29 H 0.41 0.02 8.60 -92.70 -0.80 -0.77 16 30 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 31 H 0.09 -0.20 6.09 -2.39 -0.01 -0.22 16 32 H 0.13 -1.08 7.88 -2.39 -0.02 -1.10 16 33 H 0.10 -0.65 8.10 -2.39 -0.02 -0.67 16 34 H 0.40 -3.70 8.42 -74.06 -0.62 -4.33 16 35 H 0.09 -0.57 8.10 -2.39 -0.02 -0.59 16 36 H 0.12 -0.90 7.14 -2.39 -0.02 -0.92 16 Total: 0.00 -21.16 323.80 -0.75 -21.90 By element: Atomic # 1 Polarization: -21.11 SS G_CDS: -0.85 Total: -21.96 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: 3.82 Total: 6.19 kcal Atomic # 7 Polarization: -7.94 SS G_CDS: -3.64 Total: -11.58 kcal Atomic # 8 Polarization: 2.52 SS G_CDS: -3.23 Total: -0.71 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 2.23 Total: 1.59 kcal Atomic # 14 Polarization: 3.01 SS G_CDS: 2.19 Total: 5.20 kcal Atomic # 16 Polarization: 0.63 SS G_CDS: -1.26 Total: -0.63 kcal Total: -21.16 -0.75 -21.90 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17664668_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.048 kcal (2) G-P(sol) polarization free energy of solvation -21.157 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.748 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.905 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds