Wall clock time and date at job start Tue Mar 9 2021 13:34:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.46850 * 2 1 4 4 C 1.50702 * 109.46655 * 240.00793 * 2 1 3 5 5 C 1.37979 * 120.32980 * 119.97906 * 4 2 1 6 6 N 1.32007 * 120.90321 * 179.74155 * 5 4 2 7 7 C 1.32342 * 121.64570 * 0.56652 * 6 5 4 8 8 N 1.39140 * 119.71650 * 179.71176 * 7 6 5 9 9 C 1.46493 * 120.00511 * 359.72515 * 8 7 6 10 10 C 1.52998 * 109.47640 * 180.02562 * 9 8 7 11 11 H 1.09002 * 112.84870 * 43.80041 * 10 9 8 12 12 C 1.53776 * 113.61906 * 174.99895 * 10 9 8 13 13 C 1.53774 * 87.08408 * 89.19897 * 12 10 9 14 14 O 1.42903 * 113.61673 * 270.88945 * 13 12 10 15 15 C 1.53000 * 113.61561 * 140.06618 * 13 12 10 16 16 F 1.39903 * 109.46774 * 181.53048 * 15 13 12 17 17 F 1.39896 * 109.46912 * 301.52777 * 15 13 12 18 18 F 1.39893 * 109.47116 * 61.53444 * 15 13 12 19 19 C 1.53777 * 87.08184 * 25.43089 * 13 12 10 20 20 C 1.39344 * 120.56012 * 359.43098 * 7 6 5 21 21 F 1.35101 * 120.47102 * 180.25907 * 20 7 6 22 22 C 1.38446 * 119.05833 * 0.28109 * 20 7 6 23 23 H 0.96693 * 114.00620 * 59.99768 * 1 2 3 24 24 H 1.08998 * 109.47274 * 120.00274 * 2 1 3 25 25 H 1.48497 * 110.00153 * 298.68566 * 3 2 1 26 26 H 1.48500 * 110.00013 * 60.00917 * 3 2 1 27 27 H 1.08005 * 119.54838 * 0.02562 * 5 4 2 28 28 H 0.97009 * 119.99459 * 179.72221 * 8 7 6 29 29 H 1.09004 * 109.47181 * 59.99641 * 9 8 7 30 30 H 1.09007 * 109.47065 * 300.00194 * 9 8 7 31 31 H 1.09002 * 113.61135 * 334.64990 * 12 10 9 32 32 H 1.08996 * 113.61949 * 203.75068 * 12 10 9 33 33 H 0.96700 * 114.00311 * 179.97438 * 14 13 12 34 34 H 1.09007 * 113.61025 * 89.11391 * 19 13 12 35 35 H 1.08997 * 113.62410 * 220.02130 * 19 13 12 36 36 H 1.07994 * 120.75482 * 180.02562 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.7245 -0.0461 -2.1435 6 7 3.1748 -0.6586 -3.2226 7 6 2.8777 -1.9226 -3.4785 8 7 3.3693 -2.5270 -4.6313 9 6 4.2070 -1.7628 -5.5589 10 6 4.6104 -2.6546 -6.7349 11 1 3.7820 -3.2509 -7.1175 12 6 5.3928 -1.9122 -7.8309 13 6 6.6698 -2.2723 -7.0535 14 8 7.0328 -1.3029 -6.0684 15 6 7.8414 -2.6742 -7.9516 16 9 8.9416 -3.0159 -7.1578 17 9 7.4727 -3.7728 -8.7354 18 9 8.1812 -1.6014 -8.7827 19 6 5.8904 -3.4686 -6.4823 20 6 2.0816 -2.6551 -2.6001 21 9 1.7837 -3.9469 -2.8604 22 6 1.5998 -2.0400 -1.4572 23 1 -0.3934 0.4417 -0.7649 24 1 1.7924 -0.5139 0.8899 25 1 1.5877 2.4586 -1.2241 26 1 1.5616 2.4678 1.2086 27 1 2.9844 0.9879 -1.9705 28 1 3.1574 -3.4545 -4.8207 29 1 5.1016 -1.4177 -5.0405 30 1 3.6478 -0.9038 -5.9299 31 1 5.1890 -0.8419 -7.8641 32 1 5.3295 -2.3866 -8.8102 33 1 7.8350 -1.5240 -5.5757 34 1 5.9630 -4.3687 -7.0929 35 1 6.0881 -3.6549 -5.4268 36 1 0.9808 -2.5820 -0.7576 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17664668_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:36 Heat of formation + Delta-G solvation = -199.009959 kcal Electronic energy + Delta-G solvation = -27604.807924 eV Core-core repulsion = 22784.507720 eV Total energy + Delta-G solvation = -4820.300204 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.093 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -51.23449 -49.87061 -48.78589 -48.68686 -41.57709 -41.12249 -38.28004 -37.02579 -35.83442 -33.25369 -31.94887 -29.76872 -27.44386 -27.33801 -26.07487 -24.64066 -23.37142 -22.88501 -20.82461 -20.17472 -19.54437 -19.46473 -19.14957 -18.52079 -18.30505 -17.59874 -17.31278 -17.00773 -16.48014 -16.21930 -16.10172 -15.94733 -15.73670 -15.55672 -15.46874 -15.29956 -15.14919 -14.87878 -14.87028 -14.64478 -14.57851 -14.31385 -14.11368 -13.96800 -13.64576 -13.36305 -13.21175 -12.70378 -12.62102 -12.24934 -12.04415 -11.85712 -11.44750 -11.14919 -10.78347 -10.63654 -10.53260 -8.76484 -5.01080 -0.06487 0.12838 1.21809 1.47177 1.54692 1.89022 1.92599 2.28644 2.52718 2.56338 2.58134 2.78373 3.02721 3.17163 3.21113 3.32384 3.39799 3.46068 3.55802 3.66811 3.84113 4.01626 4.16524 4.26121 4.31535 4.44146 4.48934 4.52902 4.58921 4.66647 4.71889 4.77396 4.97180 5.02600 5.36390 5.91607 6.02386 6.14656 6.34819 6.95595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.061 4.061 3 Si 0.682 3.318 4 C -0.209 4.209 5 C 0.149 3.851 6 N -0.510 5.510 7 C 0.391 3.609 8 N -0.717 5.717 9 C 0.144 3.856 10 C -0.115 4.115 11 H 0.098 0.902 12 C -0.108 4.108 13 C 0.063 3.937 14 O -0.506 6.506 15 C 0.432 3.568 16 F -0.183 7.183 17 F -0.175 7.175 18 F -0.175 7.175 19 C -0.154 4.154 20 C -0.021 4.021 21 F -0.134 7.134 22 C -0.038 4.038 23 H 0.376 0.624 24 H 0.120 0.880 25 H -0.256 1.256 26 H -0.254 1.254 27 H 0.163 0.837 28 H 0.412 0.588 29 H 0.091 0.909 30 H 0.072 0.928 31 H 0.100 0.900 32 H 0.112 0.888 33 H 0.391 0.609 34 H 0.107 0.893 35 H 0.093 0.907 36 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.988 -0.119 0.078 0.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.582 3.418 4 C -0.214 4.214 5 C -0.008 4.008 6 N -0.227 5.227 7 C 0.152 3.848 8 N -0.350 5.350 9 C 0.021 3.979 10 C -0.134 4.134 11 H 0.116 0.884 12 C -0.145 4.145 13 C 0.019 3.981 14 O -0.313 6.313 15 C 0.378 3.622 16 F -0.164 7.164 17 F -0.157 7.157 18 F -0.156 7.156 19 C -0.191 4.191 20 C -0.048 4.048 21 F -0.113 7.113 22 C -0.064 4.064 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.181 1.181 26 H -0.178 1.178 27 H 0.180 0.820 28 H 0.249 0.751 29 H 0.109 0.891 30 H 0.090 0.910 31 H 0.118 0.882 32 H 0.130 0.870 33 H 0.242 0.758 34 H 0.126 0.874 35 H 0.111 0.889 36 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.018 1.218 -0.350 1.626 hybrid contribution -0.863 -1.679 -0.089 1.890 sum 0.156 -0.461 -0.439 0.655 Atomic orbital electron populations 1.86607 1.17720 1.79929 1.49388 1.24826 0.83885 1.10782 0.97685 0.95123 0.91580 0.74289 0.80782 1.20869 1.04987 0.95131 1.00447 1.22349 0.91567 0.99141 0.87777 1.67337 1.26223 1.07375 1.21770 1.18409 0.90124 0.89124 0.87108 1.44529 1.54957 1.14706 1.20854 1.21255 0.95346 0.93023 0.88256 1.22419 0.97339 0.97617 0.95991 0.88403 1.23107 0.89653 1.03941 0.97827 1.23628 0.90342 0.93564 0.90544 1.86642 1.49072 1.45263 1.50357 1.21306 0.84829 0.75236 0.80863 1.93191 1.57173 1.92437 1.73634 1.93187 1.91304 1.55015 1.76156 1.93228 1.93238 1.55568 1.73556 1.23799 0.95012 0.96627 1.03692 1.18004 1.06982 0.80916 0.98874 1.91490 1.92198 1.33637 1.93978 1.21273 0.96190 0.94277 0.94672 0.77579 0.86206 1.18077 1.17846 0.82010 0.75148 0.89115 0.90978 0.88157 0.86952 0.75821 0.87422 0.88860 0.83321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.17 12.78 -35.23 -0.45 -0.62 16 2 C -0.06 0.08 2.84 36.01 0.10 0.18 16 3 Si 0.68 -1.33 29.82 -169.99 -5.07 -6.40 16 4 C -0.21 0.10 5.40 -104.47 -0.56 -0.46 16 5 C 0.15 -0.03 9.84 -17.57 -0.17 -0.20 16 6 N -0.51 -0.73 9.57 -12.37 -0.12 -0.85 16 7 C 0.39 0.47 7.49 -154.86 -1.16 -0.69 16 8 N -0.72 0.49 5.71 -60.34 -0.34 0.14 16 9 C 0.14 -0.20 5.28 -4.05 -0.02 -0.22 16 10 C -0.11 0.36 3.94 -89.81 -0.35 0.01 16 11 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 12 C -0.11 0.29 6.88 -25.93 -0.18 0.12 16 13 C 0.06 -0.13 1.34 -89.81 -0.12 -0.25 16 14 O -0.51 0.93 11.44 -35.23 -0.40 0.53 16 15 C 0.43 -0.12 2.84 37.16 0.11 -0.02 16 16 F -0.18 -0.05 16.69 2.25 0.04 -0.02 16 17 F -0.18 -0.03 15.75 2.25 0.04 0.01 16 18 F -0.17 -0.25 17.20 2.25 0.04 -0.21 16 19 C -0.15 0.48 6.91 -25.92 -0.18 0.30 16 20 C -0.02 -0.03 7.35 -39.09 -0.29 -0.31 16 21 F -0.13 -0.24 16.65 2.25 0.04 -0.21 16 22 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 23 H 0.38 -0.90 8.70 45.56 0.40 -0.51 16 24 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 25 H -0.26 0.02 7.11 56.52 0.40 0.42 16 26 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 27 H 0.16 -0.38 4.88 -52.48 -0.26 -0.64 16 28 H 0.41 -0.76 7.95 -40.82 -0.32 -1.09 16 29 H 0.09 -0.03 6.13 -51.93 -0.32 -0.34 16 30 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 31 H 0.10 -0.24 8.10 -51.93 -0.42 -0.66 16 32 H 0.11 -0.40 7.83 -51.93 -0.41 -0.81 16 33 H 0.39 -1.75 8.47 45.56 0.39 -1.36 16 34 H 0.11 -0.38 7.18 -51.92 -0.37 -0.75 16 35 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 36 H 0.15 -0.06 8.06 -52.49 -0.42 -0.48 16 LS Contribution 319.30 15.07 4.81 4.81 Total: 0.00 -6.33 319.30 -7.25 -13.58 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -2.62 Total: -8.81 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -3.21 Total: -1.96 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.46 Total: -0.71 kcal Atomic # 8 Polarization: 0.76 SS G_CDS: -0.85 Total: -0.09 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.15 Total: -0.42 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.07 Total: -6.40 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -6.33 -7.25 -13.58 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17664668_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -185.432 kcal (2) G-P(sol) polarization free energy of solvation -6.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -191.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.578 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.010 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds