Wall clock time and date at job start Tue Mar 9 2021 13:34:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.46850 * 2 1 4 4 C 1.50702 * 109.46655 * 240.00793 * 2 1 3 5 5 C 1.37979 * 120.32980 * 119.97906 * 4 2 1 6 6 N 1.32007 * 120.90321 * 179.74155 * 5 4 2 7 7 C 1.32342 * 121.64570 * 0.56652 * 6 5 4 8 8 N 1.39140 * 119.71650 * 179.71176 * 7 6 5 9 9 C 1.46493 * 120.00511 * 359.72515 * 8 7 6 10 10 C 1.52998 * 109.47640 * 180.02562 * 9 8 7 11 11 H 1.09002 * 112.84870 * 43.80041 * 10 9 8 12 12 C 1.53776 * 113.61906 * 174.99895 * 10 9 8 13 13 C 1.53774 * 87.08408 * 89.19897 * 12 10 9 14 14 O 1.42903 * 113.61673 * 270.88945 * 13 12 10 15 15 C 1.53000 * 113.61561 * 140.06618 * 13 12 10 16 16 F 1.39903 * 109.46774 * 181.53048 * 15 13 12 17 17 F 1.39896 * 109.46912 * 301.52777 * 15 13 12 18 18 F 1.39893 * 109.47116 * 61.53444 * 15 13 12 19 19 C 1.53777 * 87.08184 * 25.43089 * 13 12 10 20 20 C 1.39344 * 120.56012 * 359.43098 * 7 6 5 21 21 F 1.35101 * 120.47102 * 180.25907 * 20 7 6 22 22 C 1.38446 * 119.05833 * 0.28109 * 20 7 6 23 23 H 0.96693 * 114.00620 * 59.99768 * 1 2 3 24 24 H 1.08998 * 109.47274 * 120.00274 * 2 1 3 25 25 H 1.48497 * 110.00153 * 298.68566 * 3 2 1 26 26 H 1.48500 * 110.00013 * 60.00917 * 3 2 1 27 27 H 1.08005 * 119.54838 * 0.02562 * 5 4 2 28 28 H 0.97009 * 119.99459 * 179.72221 * 8 7 6 29 29 H 1.09004 * 109.47181 * 59.99641 * 9 8 7 30 30 H 1.09007 * 109.47065 * 300.00194 * 9 8 7 31 31 H 1.09002 * 113.61135 * 334.64990 * 12 10 9 32 32 H 1.08996 * 113.61949 * 203.75068 * 12 10 9 33 33 H 0.96700 * 114.00311 * 179.97438 * 14 13 12 34 34 H 1.09007 * 113.61025 * 89.11391 * 19 13 12 35 35 H 1.08997 * 113.62410 * 220.02130 * 19 13 12 36 36 H 1.07994 * 120.75482 * 180.02562 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.7245 -0.0461 -2.1435 6 7 3.1748 -0.6586 -3.2226 7 6 2.8777 -1.9226 -3.4785 8 7 3.3693 -2.5270 -4.6313 9 6 4.2070 -1.7628 -5.5589 10 6 4.6104 -2.6546 -6.7349 11 1 3.7820 -3.2509 -7.1175 12 6 5.3928 -1.9122 -7.8309 13 6 6.6698 -2.2723 -7.0535 14 8 7.0328 -1.3029 -6.0684 15 6 7.8414 -2.6742 -7.9516 16 9 8.9416 -3.0159 -7.1578 17 9 7.4727 -3.7728 -8.7354 18 9 8.1812 -1.6014 -8.7827 19 6 5.8904 -3.4686 -6.4823 20 6 2.0816 -2.6551 -2.6001 21 9 1.7837 -3.9469 -2.8604 22 6 1.5998 -2.0400 -1.4572 23 1 -0.3934 0.4417 -0.7649 24 1 1.7924 -0.5139 0.8899 25 1 1.5877 2.4586 -1.2241 26 1 1.5616 2.4678 1.2086 27 1 2.9844 0.9879 -1.9705 28 1 3.1574 -3.4545 -4.8207 29 1 5.1016 -1.4177 -5.0405 30 1 3.6478 -0.9038 -5.9299 31 1 5.1890 -0.8419 -7.8641 32 1 5.3295 -2.3866 -8.8102 33 1 7.8350 -1.5240 -5.5757 34 1 5.9630 -4.3687 -7.0929 35 1 6.0881 -3.6549 -5.4268 36 1 0.9808 -2.5820 -0.7576 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17664668_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:35 Heat of formation + Delta-G solvation = -198.155491 kcal Electronic energy + Delta-G solvation = -27604.770872 eV Core-core repulsion = 22784.507720 eV Total energy + Delta-G solvation = -4820.263152 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.093 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -51.23281 -49.94345 -48.77762 -48.71621 -41.50495 -40.99957 -38.23961 -36.92735 -35.70835 -33.25710 -31.91440 -29.68118 -27.38029 -27.11014 -26.02399 -24.61596 -23.26814 -22.86799 -20.67619 -20.07896 -19.53639 -19.45458 -19.09309 -18.48796 -18.31473 -17.59319 -17.14313 -17.03008 -16.35826 -16.14009 -16.03900 -15.90748 -15.69673 -15.56390 -15.48300 -15.24836 -15.16076 -14.89587 -14.88884 -14.59261 -14.45377 -14.30472 -14.05505 -13.93728 -13.53631 -13.29008 -13.04394 -12.65180 -12.43738 -12.08127 -12.04512 -11.70009 -11.31964 -11.04011 -10.75626 -10.64310 -10.52041 -8.74203 -4.88205 -0.07172 0.12286 1.32781 1.54588 1.64089 1.96229 2.00400 2.48005 2.55820 2.60809 2.70511 2.93008 3.03318 3.25338 3.38736 3.42678 3.49017 3.58341 3.62577 3.83433 3.87353 4.04365 4.39382 4.45974 4.51887 4.52736 4.56959 4.74309 4.76004 4.79324 4.87540 4.93394 4.99671 5.16795 5.40008 5.96543 6.20299 6.31916 6.50873 6.98251 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.067 4.067 3 Si 0.763 3.237 4 C -0.204 4.204 5 C 0.147 3.853 6 N -0.527 5.527 7 C 0.382 3.618 8 N -0.712 5.712 9 C 0.150 3.850 10 C -0.106 4.106 11 H 0.112 0.888 12 C -0.109 4.109 13 C 0.064 3.936 14 O -0.516 6.516 15 C 0.429 3.571 16 F -0.188 7.188 17 F -0.178 7.178 18 F -0.187 7.187 19 C -0.147 4.147 20 C -0.037 4.037 21 F -0.140 7.140 22 C -0.041 4.041 23 H 0.386 0.614 24 H 0.130 0.870 25 H -0.278 1.278 26 H -0.301 1.301 27 H 0.182 0.818 28 H 0.417 0.583 29 H 0.081 0.919 30 H 0.062 0.938 31 H 0.096 0.904 32 H 0.122 0.878 33 H 0.401 0.599 34 H 0.115 0.885 35 H 0.094 0.906 36 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.993 -0.294 0.061 1.038 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.176 4.176 3 Si 0.668 3.332 4 C -0.210 4.210 5 C -0.010 4.010 6 N -0.244 5.244 7 C 0.143 3.857 8 N -0.346 5.346 9 C 0.026 3.974 10 C -0.125 4.125 11 H 0.130 0.870 12 C -0.147 4.147 13 C 0.021 3.979 14 O -0.325 6.325 15 C 0.375 3.625 16 F -0.169 7.169 17 F -0.159 7.159 18 F -0.168 7.168 19 C -0.184 4.184 20 C -0.063 4.063 21 F -0.119 7.119 22 C -0.067 4.067 23 H 0.236 0.764 24 H 0.147 0.853 25 H -0.204 1.204 26 H -0.229 1.229 27 H 0.198 0.802 28 H 0.254 0.746 29 H 0.099 0.901 30 H 0.080 0.920 31 H 0.114 0.886 32 H 0.140 0.860 33 H 0.253 0.747 34 H 0.133 0.867 35 H 0.112 0.888 36 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.038 1.013 -0.385 1.500 hybrid contribution -0.869 -1.584 -0.056 1.808 sum 0.169 -0.572 -0.441 0.741 Atomic orbital electron populations 1.86580 1.18535 1.80333 1.50229 1.25022 0.83313 1.11532 0.97736 0.94177 0.90243 0.71858 0.76895 1.20898 1.04711 0.94779 1.00571 1.22682 0.91113 0.99878 0.87295 1.67382 1.26911 1.07606 1.22541 1.18569 0.90277 0.89243 0.87618 1.44575 1.54624 1.14947 1.20412 1.21180 0.94571 0.93088 0.88510 1.22321 0.97749 0.97316 0.95119 0.87031 1.23188 0.89210 1.03914 0.98356 1.23723 0.89667 0.94124 0.90421 1.86625 1.49764 1.45659 1.50433 1.21643 0.85202 0.74833 0.80851 1.93177 1.57622 1.92458 1.73682 1.93176 1.91295 1.55140 1.76333 1.93200 1.93412 1.56175 1.74040 1.23791 0.94388 0.96413 1.03812 1.18122 1.07852 0.80855 0.99521 1.91466 1.92345 1.34039 1.94088 1.21422 0.96051 0.94705 0.94503 0.76424 0.85265 1.20444 1.22852 0.80201 0.74552 0.90123 0.91960 0.88558 0.85974 0.74701 0.86706 0.88760 0.82813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.23 12.78 -148.98 -1.90 -2.14 16 2 C -0.07 0.20 2.84 71.24 0.20 0.40 16 3 Si 0.76 -3.21 29.82 68.60 2.05 -1.17 16 4 C -0.20 0.26 5.40 -19.76 -0.11 0.15 16 5 C 0.15 -0.11 9.84 84.61 0.83 0.72 16 6 N -0.53 -1.55 9.57 -193.03 -1.85 -3.40 16 7 C 0.38 1.02 7.49 133.08 1.00 2.01 16 8 N -0.71 0.87 5.71 -344.81 -1.97 -1.10 16 9 C 0.15 -0.40 5.28 86.38 0.46 0.06 16 10 C -0.11 0.72 3.94 -10.27 -0.04 0.68 16 11 H 0.11 -1.01 8.14 -2.39 -0.02 -1.03 16 12 C -0.11 0.62 6.88 31.12 0.21 0.83 16 13 C 0.06 -0.26 1.34 -10.27 -0.01 -0.28 16 14 O -0.52 1.78 11.44 -148.98 -1.70 0.07 16 15 C 0.43 -0.17 2.84 71.98 0.20 0.04 16 16 F -0.19 -0.16 16.69 44.97 0.75 0.59 16 17 F -0.18 -0.04 15.75 44.97 0.71 0.67 16 18 F -0.19 -0.61 17.20 44.97 0.77 0.16 16 19 C -0.15 0.99 6.91 31.12 0.22 1.20 16 20 C -0.04 -0.11 7.35 22.59 0.17 0.06 16 21 F -0.14 -0.57 16.65 44.97 0.75 0.17 16 22 C -0.04 -0.04 9.75 22.48 0.22 0.18 16 23 H 0.39 -1.90 8.70 -74.06 -0.64 -2.54 16 24 H 0.13 -0.63 7.96 -2.39 -0.02 -0.65 16 25 H -0.28 0.15 7.11 99.48 0.71 0.86 16 26 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 27 H 0.18 -0.99 4.88 -2.91 -0.01 -1.01 16 28 H 0.42 -1.56 7.95 -92.70 -0.74 -2.29 16 29 H 0.08 -0.02 6.13 -2.38 -0.01 -0.04 16 30 H 0.06 -0.03 8.14 -2.38 -0.02 -0.05 16 31 H 0.10 -0.45 8.10 -2.39 -0.02 -0.47 16 32 H 0.12 -0.94 7.83 -2.39 -0.02 -0.95 16 33 H 0.40 -3.44 8.47 -74.06 -0.63 -4.07 16 34 H 0.11 -0.90 7.18 -2.38 -0.02 -0.92 16 35 H 0.09 -0.62 8.10 -2.39 -0.02 -0.64 16 36 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 Total: 0.00 -14.61 319.30 0.17 -14.44 By element: Atomic # 1 Polarization: -13.58 SS G_CDS: -0.78 Total: -14.36 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: 3.34 Total: 6.06 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -3.81 Total: -4.50 kcal Atomic # 8 Polarization: 1.54 SS G_CDS: -3.61 Total: -2.07 kcal Atomic # 9 Polarization: -1.39 SS G_CDS: 2.98 Total: 1.59 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.05 Total: -1.17 kcal Total: -14.61 0.17 -14.44 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17664668_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -183.717 kcal (2) G-P(sol) polarization free energy of solvation -14.609 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.170 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.439 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds