Wall clock time and date at job start Tue Mar 9 2021 13:36:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47063 * 2 1 4 4 C 1.50703 * 109.47165 * 240.00202 * 2 1 3 5 5 C 1.38607 * 120.72120 * 300.00146 * 4 2 1 6 6 N 1.32273 * 119.19831 * 179.97438 * 5 4 2 7 7 C 1.32493 * 120.74149 * 0.02562 * 6 5 4 8 8 N 1.38406 * 119.22040 * 180.02562 * 7 6 5 9 9 C 1.46499 * 120.00136 * 179.97438 * 8 7 6 10 10 C 1.53000 * 109.46840 * 179.97438 * 9 8 7 11 11 C 1.52997 * 109.47060 * 180.02562 * 10 9 8 12 12 H 1.09006 * 112.85138 * 43.80478 * 11 10 9 13 13 C 1.53781 * 113.61559 * 175.00203 * 11 10 9 14 14 C 1.53782 * 87.08224 * 139.98357 * 13 11 10 15 15 H 1.09005 * 113.61892 * 89.19814 * 14 13 11 16 16 O 1.42898 * 113.61368 * 220.02150 * 14 13 11 17 17 C 1.53782 * 87.08134 * 334.56746 * 14 13 11 18 18 N 1.32502 * 121.56492 * 0.27049 * 7 6 5 19 19 C 1.32277 * 120.73865 * 359.44699 * 18 7 6 20 20 H 0.96689 * 114.00441 * 59.99908 * 1 2 3 21 21 H 1.09001 * 109.47623 * 120.00531 * 2 1 3 22 22 H 1.48497 * 110.00014 * 298.68407 * 3 2 1 23 23 H 1.48501 * 109.99656 * 60.00305 * 3 2 1 24 24 H 1.08000 * 120.39788 * 359.97438 * 5 4 2 25 25 H 0.97005 * 119.99416 * 359.97438 * 8 7 6 26 26 H 1.09001 * 109.46813 * 60.00043 * 9 8 7 27 27 H 1.08992 * 109.47397 * 300.00105 * 9 8 7 28 28 H 1.09002 * 109.47398 * 300.00326 * 10 9 8 29 29 H 1.09001 * 109.47194 * 60.00507 * 10 9 8 30 30 H 1.09003 * 113.61181 * 254.52982 * 13 11 10 31 31 H 1.08992 * 113.61416 * 25.35035 * 13 11 10 32 32 H 0.96703 * 114.00115 * 179.97438 * 16 14 13 33 33 H 1.08998 * 113.61542 * 270.88622 * 17 14 13 34 34 H 1.08998 * 113.61766 * 139.98331 * 17 14 13 35 35 H 1.07997 * 120.40361 * 180.24573 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6056 -2.0371 -1.4647 6 7 2.0625 -2.6310 -2.5548 7 6 2.8233 -1.9722 -3.4166 8 7 3.2837 -2.6242 -4.5473 9 6 4.1255 -1.9121 -5.5119 10 6 4.4947 -2.8540 -6.6596 11 6 5.3744 -2.1105 -7.6667 12 1 6.1473 -1.5078 -7.1897 13 6 5.9027 -3.0043 -8.8011 14 6 5.6385 -1.8227 -9.7491 15 1 6.4838 -1.1410 -9.8435 16 8 5.0963 -2.2125 -11.0125 17 6 4.5760 -1.3535 -8.7412 18 7 3.1576 -0.7053 -3.2194 19 6 2.7294 -0.0513 -2.1524 20 1 -0.3933 0.4416 -0.7649 21 1 1.7924 -0.5139 0.8899 22 1 1.5878 2.4586 -1.2242 23 1 1.5614 2.4678 1.2086 24 1 0.9863 -2.5794 -0.7657 25 1 3.0490 -3.5528 -4.7010 26 1 5.0343 -1.5690 -5.0173 27 1 3.5806 -1.0545 -5.9061 28 1 5.0399 -3.7115 -6.2650 29 1 3.5862 -3.1975 -7.1544 30 1 6.9584 -3.2571 -8.7021 31 1 5.2761 -3.8737 -8.9997 32 1 4.9276 -1.4736 -11.6130 33 1 3.5859 -1.7709 -8.9244 34 1 4.5605 -0.2736 -8.5939 35 1 3.0020 0.9824 -1.9990 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17837618_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:36:06 Heat of formation + Delta-G solvation = -0.423361 kcal Electronic energy + Delta-G solvation = -17847.951899 eV Core-core repulsion = 14848.653048 eV Total energy + Delta-G solvation = -2999.298851 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 252.126 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -42.04291 -40.51688 -38.38293 -37.30483 -36.02448 -34.67705 -33.16885 -30.97334 -26.97344 -26.75787 -25.98130 -24.93374 -23.06633 -22.60625 -20.62145 -19.41036 -18.74120 -18.33626 -18.11894 -16.79947 -16.60355 -16.27698 -16.08561 -15.95386 -15.59500 -15.37561 -15.23203 -14.53142 -14.28166 -14.00742 -13.48368 -13.41431 -13.14873 -12.86633 -12.57651 -12.24267 -12.05903 -11.83350 -11.76350 -11.73993 -11.38839 -11.19051 -10.76231 -10.70884 -10.01071 -9.08819 -5.03278 0.08596 0.18832 1.22012 1.52417 1.82680 1.91386 2.85052 3.11306 3.21453 3.31636 3.41650 3.51804 3.62591 3.68926 3.72245 3.79938 3.88576 4.01591 4.20123 4.22958 4.29624 4.48404 4.54230 4.60560 4.73224 4.74094 4.76521 4.86569 4.91957 5.01460 5.15504 5.24584 5.37362 5.78385 6.02438 6.34161 6.42139 6.67172 7.31831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.052 4.052 3 Si 0.678 3.322 4 C -0.294 4.294 5 C 0.223 3.777 6 N -0.570 5.570 7 C 0.566 3.434 8 N -0.697 5.697 9 C 0.137 3.863 10 C -0.121 4.121 11 C -0.105 4.105 12 H 0.098 0.902 13 C -0.125 4.125 14 C 0.074 3.926 15 H 0.082 0.918 16 O -0.561 6.561 17 C -0.166 4.166 18 N -0.562 5.562 19 C 0.199 3.801 20 H 0.376 0.624 21 H 0.120 0.880 22 H -0.258 1.258 23 H -0.253 1.253 24 H 0.170 0.830 25 H 0.415 0.585 26 H 0.069 0.931 27 H 0.068 0.932 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.075 0.925 31 H 0.091 0.909 32 H 0.379 0.621 33 H 0.090 0.910 34 H 0.070 0.930 35 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.842 1.866 -0.630 3.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.579 3.421 4 C -0.303 4.303 5 C 0.055 3.945 6 N -0.292 5.292 7 C 0.210 3.790 8 N -0.333 5.333 9 C 0.013 3.987 10 C -0.159 4.159 11 C -0.124 4.124 12 H 0.116 0.884 13 C -0.162 4.162 14 C 0.015 3.985 15 H 0.100 0.900 16 O -0.367 6.367 17 C -0.204 4.204 18 N -0.285 5.285 19 C 0.032 3.968 20 H 0.223 0.777 21 H 0.138 0.862 22 H -0.183 1.183 23 H -0.178 1.178 24 H 0.187 0.813 25 H 0.252 0.748 26 H 0.088 0.912 27 H 0.087 0.913 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.093 0.907 31 H 0.110 0.890 32 H 0.226 0.774 33 H 0.108 0.892 34 H 0.089 0.911 35 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 3.252 1.409 -0.816 3.637 hybrid contribution -1.522 0.490 -0.054 1.600 sum 1.731 1.900 -0.869 2.713 Atomic orbital electron populations 1.86604 1.17785 1.79855 1.49362 1.24671 0.83738 1.10506 0.97467 0.95251 0.91533 0.74580 0.80782 1.21652 1.08240 0.98372 1.01990 1.22835 0.90234 0.90600 0.90840 1.67990 1.16113 1.39371 1.05686 1.19408 0.86900 0.85668 0.87054 1.44207 1.54324 1.14773 1.19995 1.21355 0.94273 0.94918 0.88127 1.21760 1.00246 0.98486 0.95406 1.22220 0.98418 0.97959 0.93764 0.88416 1.23122 1.02047 0.97558 0.93505 1.23350 0.95393 0.97361 0.82441 0.90000 1.86534 1.85595 1.37616 1.26939 1.23790 0.99501 1.00733 0.96378 1.67942 1.28342 1.08468 1.23714 1.22785 0.88509 0.98833 0.86707 0.77654 0.86202 1.18254 1.17757 0.81252 0.74769 0.91233 0.91332 0.90748 0.90887 0.90651 0.89041 0.77364 0.89168 0.91099 0.81689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.15 12.79 -35.23 -0.45 -0.60 16 2 C -0.05 0.06 2.85 36.01 0.10 0.16 16 3 Si 0.68 -1.24 29.87 -169.99 -5.08 -6.32 16 4 C -0.29 -0.01 5.40 -104.35 -0.56 -0.57 16 5 C 0.22 0.27 10.92 -17.23 -0.19 0.09 16 6 N -0.57 -1.74 10.46 -13.93 -0.15 -1.88 16 7 C 0.57 1.59 8.43 -322.80 -2.72 -1.13 16 8 N -0.70 -0.46 5.70 -62.31 -0.36 -0.82 16 9 C 0.14 -0.11 5.64 -4.04 -0.02 -0.14 16 10 C -0.12 0.26 5.16 -26.73 -0.14 0.12 16 11 C -0.10 0.22 3.65 -89.81 -0.33 -0.11 16 12 H 0.10 -0.26 8.13 -51.93 -0.42 -0.68 16 13 C -0.12 0.12 7.47 -25.92 -0.19 -0.07 16 14 C 0.07 -0.06 5.21 -25.92 -0.14 -0.19 16 15 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 16 O -0.56 -0.41 13.67 -35.23 -0.48 -0.90 16 17 C -0.17 0.25 7.46 -25.92 -0.19 0.05 16 18 N -0.56 -1.40 9.59 -13.93 -0.13 -1.53 16 19 C 0.20 0.09 9.92 -17.22 -0.17 -0.08 16 20 H 0.38 -0.84 8.70 45.56 0.40 -0.45 16 21 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 22 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 23 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 24 H 0.17 -0.09 8.06 -52.49 -0.42 -0.52 16 25 H 0.41 -0.19 8.59 -40.82 -0.35 -0.54 16 26 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 -0.13 7.84 -51.93 -0.41 -0.54 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.09 -0.01 8.10 -51.93 -0.42 -0.43 16 32 H 0.38 -1.22 9.12 45.56 0.42 -0.81 16 33 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 34 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.17 -0.34 5.04 -52.49 -0.26 -0.61 16 LS Contribution 296.69 15.07 4.47 4.47 Total: 0.00 -7.15 296.69 -10.76 -17.91 By element: Atomic # 1 Polarization: -4.43 SS G_CDS: -4.03 Total: -8.46 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -4.55 Total: -1.86 kcal Atomic # 7 Polarization: -3.60 SS G_CDS: -0.63 Total: -4.23 kcal Atomic # 8 Polarization: -0.57 SS G_CDS: -0.93 Total: -1.50 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.08 Total: -6.32 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -7.15 -10.76 -17.91 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17837618_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.483 kcal (2) G-P(sol) polarization free energy of solvation -7.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds