Wall clock time and date at job start Tue Mar 9 2021 12:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00902 * 1 3 3 H 1.00894 * 109.46827 * 1 2 4 4 H 1.00899 * 109.47323 * 239.99806 * 1 2 3 5 5 C 1.46900 * 109.46623 * 119.99596 * 1 2 3 6 6 H 1.09000 * 109.47427 * 299.99826 * 5 1 2 7 7 C 1.52997 * 109.47369 * 60.00396 * 5 1 2 8 8 C 1.52999 * 109.47528 * 179.97438 * 7 5 1 9 9 C 1.52997 * 109.47018 * 300.00105 * 8 7 5 10 10 H 1.09009 * 109.47184 * 299.99597 * 9 8 7 11 11 N 1.46500 * 109.47113 * 179.97438 * 9 8 7 12 12 C 1.34784 * 119.99987 * 154.99884 * 11 9 8 13 13 O 1.21564 * 119.99713 * 359.97438 * 12 11 9 14 14 C 1.47797 * 119.99722 * 180.02562 * 12 11 9 15 15 C 1.39560 * 119.95478 * 180.02562 * 14 12 11 16 16 N 1.31880 * 120.03887 * 179.97438 * 15 14 12 17 17 C 1.33274 * 119.94941 * 359.97438 * 16 15 14 18 18 C 1.47327 * 120.03871 * 180.02562 * 17 16 15 19 19 C 1.36131 * 125.33167 * 0.02562 * 18 17 16 20 20 C 1.37651 * 114.47279 * 179.97438 * 19 18 17 21 21 C 1.33798 * 115.18431 * 0.02562 * 20 19 18 22 22 C 1.50699 * 125.03230 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.47269 * 299.99893 * 22 21 20 24 24 Si 1.86303 * 109.47350 * 179.97438 * 22 21 20 25 25 S 1.75834 * 109.93856 * 359.73206 * 21 20 19 26 26 C 1.40311 * 119.91518 * 359.97438 * 17 16 15 27 27 N 1.31421 * 119.96049 * 0.02562 * 26 17 16 28 28 C 1.52994 * 109.47377 * 59.99790 * 9 8 7 29 29 C 1.52999 * 109.47217 * 300.00087 * 28 9 8 30 30 H 1.09000 * 109.47312 * 59.99359 * 7 5 1 31 31 H 1.09003 * 109.47028 * 300.00049 * 7 5 1 32 32 H 1.08998 * 109.47289 * 179.97438 * 8 7 5 33 33 H 1.09000 * 109.46683 * 59.99652 * 8 7 5 34 34 H 0.97001 * 119.99976 * 334.99960 * 11 9 8 35 35 H 1.07991 * 119.97641 * 359.96727 * 15 14 12 36 36 H 1.07996 * 122.76340 * 0.02562 * 19 18 17 37 37 H 1.08004 * 122.40947 * 180.02562 * 20 19 18 38 38 H 1.09003 * 109.47283 * 59.99392 * 22 21 20 39 39 H 0.96697 * 114.00194 * 180.02562 * 23 22 21 40 40 H 1.48498 * 109.99851 * 60.00077 * 24 22 21 41 41 H 1.48506 * 110.00014 * 181.31941 * 24 22 21 42 42 H 1.08005 * 120.01787 * 180.02562 * 26 17 16 43 43 H 1.09000 * 109.47413 * 59.99786 * 28 9 8 44 44 H 1.09008 * 109.47381 * 180.02562 * 28 9 8 45 45 H 1.09008 * 109.47312 * 300.00037 * 29 28 9 46 46 H 1.09000 * 109.47529 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4895 -0.6924 -1.1995 6 1 -0.1262 -0.1785 -2.0895 7 6 0.0204 -2.1349 -1.1996 8 6 -0.4900 -2.8563 -2.4486 9 6 -2.0200 -2.8563 -2.4481 10 1 -2.3831 -3.3701 -1.5579 11 7 -2.5087 -3.5465 -3.6443 12 6 -3.7307 -4.1151 -3.6423 13 8 -4.4271 -4.0555 -2.6477 14 6 -4.2235 -4.8119 -4.8490 15 6 -5.4892 -5.3998 -4.8461 16 7 -5.9307 -6.0216 -5.9221 17 6 -5.1675 -6.0876 -7.0127 18 6 -5.6590 -6.7812 -8.2159 19 6 -6.8708 -7.3902 -8.3338 20 6 -7.1005 -7.9705 -9.5607 21 6 -6.1029 -7.8482 -10.4440 22 6 -6.1183 -8.3966 -11.8476 23 8 -6.2777 -9.8160 -11.8028 24 14 -4.5131 -7.9778 -12.6956 25 16 -4.7748 -6.9457 -9.7275 26 6 -3.8957 -5.4949 -7.0137 27 7 -3.4592 -4.8762 -5.9395 28 6 -2.5300 -1.4138 -2.4481 29 6 -2.0196 -0.6924 -1.1991 30 1 -0.3429 -2.6488 -0.3096 31 1 1.1104 -2.1349 -1.1995 32 1 -0.1263 -3.8838 -2.4488 33 1 -0.1269 -2.3425 -3.3387 34 1 -1.9528 -3.5943 -4.4378 35 1 -6.1073 -5.3457 -3.9623 36 1 -7.5929 -7.4151 -7.5311 37 1 -8.0197 -8.4873 -9.7937 38 1 -6.9472 -7.9552 -12.4011 39 1 -6.2959 -10.2374 -12.6729 40 1 -3.3749 -8.5735 -11.9508 41 1 -4.5284 -8.4855 -14.0911 42 1 -3.2760 -5.5471 -7.8967 43 1 -2.1669 -0.9000 -3.3382 44 1 -3.6201 -1.4138 -2.4473 45 1 -2.3826 -1.2062 -0.3088 46 1 -2.3833 0.3351 -1.1988 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081486_17088084.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:31 Heat of formation + Delta-G solvation = 129.273265 kcal Electronic energy + Delta-G solvation = -28644.867745 eV Core-core repulsion = 24553.519998 eV Total energy + Delta-G solvation = -4091.347747 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.133 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.57896 -43.12059 -41.53445 -39.87623 -39.23263 -38.23356 -36.60435 -35.74382 -34.49076 -33.97789 -32.03341 -31.08539 -28.69921 -26.69734 -26.27917 -26.08975 -25.20598 -24.42138 -23.51198 -22.98967 -21.45761 -21.21076 -21.15044 -20.28508 -19.92142 -19.72536 -19.20531 -19.09784 -18.40749 -17.76561 -17.63908 -17.50882 -17.18713 -16.96289 -16.80572 -16.46860 -16.32687 -16.10911 -15.76686 -15.57462 -15.29016 -15.24299 -14.81597 -14.71257 -14.67996 -14.52626 -14.43626 -14.18809 -13.94519 -13.66903 -13.52273 -13.38343 -13.25366 -13.20879 -12.97595 -12.49243 -12.35211 -11.78007 -11.41444 -11.19727 -11.14680 -10.19991 -10.00762 -5.70841 -2.01365 -1.20208 -0.91839 -0.66939 -0.40167 0.01451 0.53442 0.62612 0.66411 0.68578 0.75242 0.85036 0.94797 1.10271 1.29799 1.48157 1.58763 1.66563 1.83730 1.85690 1.97597 2.06679 2.09113 2.21551 2.34161 2.39966 2.41692 2.55600 2.60988 2.69577 2.78130 2.85306 2.90373 2.96769 3.07826 3.12739 3.16185 3.29905 3.52375 3.55202 3.63586 3.68001 3.77279 3.92280 4.12121 4.21692 4.42373 4.52870 4.74205 5.04381 5.24220 5.68160 5.75775 5.95894 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.024611 B = 0.001757 C = 0.001673 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1137.407456 B =15928.126533 C =16736.833623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.127 4.127 9 C 0.139 3.861 10 H 0.098 0.902 11 N -0.713 5.713 12 C 0.588 3.412 13 O -0.522 6.522 14 C -0.002 4.002 15 C 0.135 3.865 16 N -0.433 5.433 17 C 0.199 3.801 18 C -0.188 4.188 19 C -0.059 4.059 20 C -0.116 4.116 21 C -0.147 4.147 22 C -0.040 4.040 23 O -0.530 6.530 24 Si 0.646 3.354 25 S 0.162 5.838 26 C 0.058 3.942 27 N -0.401 5.401 28 C -0.132 4.132 29 C -0.139 4.139 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.084 0.916 34 H 0.415 0.585 35 H 0.188 0.812 36 H 0.156 0.844 37 H 0.152 0.848 38 H 0.093 0.907 39 H 0.387 0.613 40 H -0.234 1.234 41 H -0.235 1.235 42 H 0.178 0.822 43 H 0.079 0.921 44 H 0.092 0.908 45 H 0.092 0.908 46 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.628 24.827 23.211 39.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.265 0.735 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.034 3.966 10 H 0.116 0.884 11 N -0.365 5.365 12 C 0.373 3.627 13 O -0.397 6.397 14 C -0.142 4.142 15 C -0.026 4.026 16 N -0.147 5.147 17 C 0.059 3.941 18 C -0.306 4.306 19 C -0.093 4.093 20 C -0.146 4.146 21 C -0.266 4.266 22 C -0.152 4.152 23 O -0.339 6.339 24 Si 0.543 3.457 25 S 0.428 5.572 26 C -0.108 4.108 27 N -0.118 5.118 28 C -0.171 4.171 29 C -0.177 4.177 30 H 0.111 0.889 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.103 0.897 34 H 0.252 0.748 35 H 0.205 0.795 36 H 0.173 0.827 37 H 0.170 0.830 38 H 0.110 0.890 39 H 0.236 0.764 40 H -0.158 1.158 41 H -0.157 1.157 42 H 0.195 0.805 43 H 0.098 0.902 44 H 0.111 0.889 45 H 0.111 0.889 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 21.195 25.040 23.479 40.343 hybrid contribution -1.549 -1.419 -0.096 2.103 sum 19.647 23.621 23.383 38.610 Atomic orbital electron populations 1.42647 1.21158 1.20711 1.18851 0.73457 0.73395 0.73742 1.23590 0.99696 0.97432 0.87262 0.83843 1.22019 1.02749 0.90866 1.01956 1.21765 0.94430 1.03085 0.97297 1.21055 0.93044 0.92453 0.90013 0.88420 1.45749 1.17803 1.55955 1.16958 1.17525 0.81476 0.77762 0.85939 1.90859 1.56297 1.59416 1.33089 1.21941 0.94871 1.03029 0.94379 1.23872 0.92997 0.88943 0.96822 1.68743 1.33206 1.14112 0.98661 1.20158 0.90992 0.91738 0.91243 1.22691 1.00557 1.10763 0.96571 1.20802 0.95528 0.94808 0.98127 1.20084 1.00745 1.01352 0.92399 1.24010 0.97530 1.05336 0.99695 1.24091 1.11350 0.84314 0.95403 1.86593 1.95127 1.17581 1.34584 0.95460 0.76597 0.92139 0.81461 1.83984 1.17794 1.52119 1.03288 1.23731 0.94382 0.95320 0.97372 1.68187 1.33092 1.11815 0.98662 1.21946 1.03628 0.94966 0.96559 1.22051 0.89248 1.04092 1.02343 0.88897 0.88590 0.88690 0.89732 0.74819 0.79506 0.82679 0.83046 0.88967 0.76427 1.15760 1.15748 0.80513 0.90186 0.88921 0.88948 0.88823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.96 4.15 -4.67 -0.02 23.94 16 2 H 0.44 -17.18 8.96 -39.29 -0.35 -17.53 16 3 H 0.44 -17.10 8.96 -39.30 -0.35 -17.45 16 4 H 0.43 -16.71 8.90 -39.29 -0.35 -17.06 16 5 C 0.02 -0.76 3.03 -67.71 -0.20 -0.96 16 6 H 0.14 -4.57 8.14 -51.93 -0.42 -5.00 16 7 C -0.14 3.85 5.43 -26.73 -0.15 3.70 16 8 C -0.13 2.89 5.39 -26.73 -0.14 2.75 16 9 C 0.14 -2.67 2.45 -67.93 -0.17 -2.84 16 10 H 0.10 -1.72 7.58 -51.92 -0.39 -2.11 16 11 N -0.71 10.66 5.07 -54.76 -0.28 10.39 16 12 C 0.59 -6.26 7.77 -12.35 -0.10 -6.35 16 13 O -0.52 4.28 15.99 5.31 0.08 4.36 16 14 C 0.00 0.02 6.75 -82.82 -0.56 -0.54 16 15 C 0.14 -1.05 10.76 -17.04 -0.18 -1.23 16 16 N -0.43 2.67 10.12 -9.36 -0.09 2.58 16 17 C 0.20 -1.37 6.75 -82.77 -0.56 -1.93 16 18 C -0.19 1.24 6.41 -36.64 -0.23 1.01 16 19 C -0.06 0.37 9.90 -40.55 -0.40 -0.03 16 20 C -0.12 0.71 9.98 -41.35 -0.41 0.30 16 21 C -0.15 0.94 5.76 -35.87 -0.21 0.74 16 22 C -0.04 0.29 2.95 36.01 0.11 0.40 16 23 O -0.53 3.10 12.83 -35.23 -0.45 2.65 16 24 Si 0.65 -5.04 30.95 -169.99 -5.26 -10.30 16 25 S 0.16 -1.25 19.45 -107.50 -2.09 -3.34 16 26 C 0.06 -0.50 10.78 -16.95 -0.18 -0.69 16 27 N -0.40 3.73 9.68 -9.30 -0.09 3.64 16 28 C -0.13 2.77 5.49 -26.73 -0.15 2.62 16 29 C -0.14 3.75 5.43 -26.73 -0.15 3.61 16 30 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 31 H 0.10 -2.77 8.14 -51.93 -0.42 -3.19 16 32 H 0.09 -1.95 8.14 -51.93 -0.42 -2.38 16 33 H 0.08 -1.94 8.14 -51.93 -0.42 -2.36 16 34 H 0.41 -6.48 7.94 -40.82 -0.32 -6.80 16 35 H 0.19 -1.70 7.63 -52.49 -0.40 -2.10 16 36 H 0.16 -1.05 8.01 -52.49 -0.42 -1.47 16 37 H 0.15 -1.05 8.06 -52.48 -0.42 -1.47 16 38 H 0.09 -0.85 7.96 -51.93 -0.41 -1.26 16 39 H 0.39 -3.74 8.74 45.56 0.40 -3.34 16 40 H -0.23 1.19 7.11 56.52 0.40 1.59 16 41 H -0.23 1.38 7.11 56.52 0.40 1.78 16 42 H 0.18 -1.95 7.28 -52.48 -0.38 -2.33 16 43 H 0.08 -1.68 8.14 -51.93 -0.42 -2.11 16 44 H 0.09 -1.59 8.14 -51.92 -0.42 -2.01 16 45 H 0.09 -2.48 8.14 -51.92 -0.42 -2.90 16 46 H 0.09 -2.59 8.14 -51.93 -0.42 -3.01 16 LS Contribution 390.80 15.07 5.89 5.89 Total: 1.00 -42.78 390.80 -12.41 -55.19 By element: Atomic # 1 Polarization: -89.12 SS G_CDS: -6.41 Total: -95.53 kcal Atomic # 6 Polarization: 4.23 SS G_CDS: -3.68 Total: 0.55 kcal Atomic # 7 Polarization: 41.02 SS G_CDS: -0.48 Total: 40.54 kcal Atomic # 8 Polarization: 7.38 SS G_CDS: -0.37 Total: 7.01 kcal Atomic # 14 Polarization: -5.04 SS G_CDS: -5.26 Total: -10.30 kcal Atomic # 16 Polarization: -1.25 SS G_CDS: -2.09 Total: -3.34 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -42.78 -12.41 -55.19 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081486_17088084.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 184.460 kcal (2) G-P(sol) polarization free energy of solvation -42.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 141.682 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.408 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds