Wall clock time and date at job start Tue Mar 9 2021 12:57:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00894 * 1 3 3 H 1.00904 * 109.47241 * 1 2 4 4 H 1.00898 * 109.46936 * 240.01284 * 1 2 3 5 5 C 1.46896 * 109.47751 * 120.00875 * 1 2 3 6 6 H 1.09008 * 109.46714 * 299.99826 * 5 1 2 7 7 C 1.53002 * 109.47361 * 59.99715 * 5 1 2 8 8 C 1.53000 * 109.47108 * 180.02562 * 7 5 1 9 9 C 1.53001 * 109.46989 * 299.99527 * 8 7 5 10 10 H 1.08998 * 109.47258 * 300.01076 * 9 8 7 11 11 N 1.46497 * 109.47149 * 179.97438 * 9 8 7 12 12 C 1.38999 * 119.99613 * 155.00335 * 11 9 8 13 13 C 1.39275 * 120.02895 * 359.72185 * 12 11 9 14 14 N 1.32049 * 120.13620 * 179.77603 * 13 12 11 15 15 C 1.32048 * 120.19048 * 0.48349 * 14 13 12 16 16 C 1.39403 * 120.04763 * 359.77864 * 15 14 13 17 17 C 1.48262 * 120.06515 * 179.97438 * 16 15 14 18 18 C 1.35902 * 127.12929 * 133.12130 * 17 16 15 19 19 C 1.50696 * 125.76878 * 359.97294 * 18 17 16 20 20 O 1.42901 * 109.47433 * 322.77673 * 19 18 17 21 21 Si 1.86303 * 109.46820 * 202.77455 * 19 18 17 22 22 O 1.33998 * 108.45463 * 179.97438 * 18 17 16 23 23 C 1.34169 * 110.77491 * 359.97438 * 22 18 17 24 24 C 1.34338 * 109.01306 * 359.70912 * 23 22 18 25 25 N 1.32617 * 120.02345 * 180.02562 * 12 11 9 26 26 C 1.53002 * 109.46810 * 60.00290 * 9 8 7 27 27 C 1.52996 * 109.47360 * 180.02562 * 5 1 2 28 28 H 1.08995 * 109.46905 * 60.00184 * 7 5 1 29 29 H 1.09002 * 109.46716 * 300.00310 * 7 5 1 30 30 H 1.08995 * 109.47521 * 60.00031 * 8 7 5 31 31 H 1.08999 * 109.46912 * 180.02562 * 8 7 5 32 32 H 0.96997 * 119.99911 * 335.00599 * 11 9 8 33 33 H 1.08003 * 119.93741 * 0.03070 * 13 12 11 34 34 H 1.08003 * 119.97818 * 179.75046 * 15 14 13 35 35 H 1.09004 * 109.47213 * 82.77974 * 19 18 17 36 36 H 0.96698 * 114.00060 * 299.99557 * 20 19 18 37 37 H 1.48501 * 110.00028 * 180.02562 * 21 19 18 38 38 H 1.48493 * 110.00395 * 301.31966 * 21 19 18 39 39 H 1.08010 * 125.49671 * 179.97438 * 23 22 18 40 40 H 1.08003 * 126.99919 * 180.26990 * 24 23 22 41 41 H 1.09001 * 109.47276 * 60.00172 * 26 9 8 42 42 H 1.09006 * 109.47128 * 179.97438 * 26 9 8 43 43 H 1.09000 * 109.47372 * 59.99765 * 27 5 1 44 44 H 1.09002 * 109.47319 * 299.99805 * 27 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4755 0.8239 5 6 -0.4898 -0.6926 -1.1993 6 1 -0.1265 -0.1789 -2.0894 7 6 0.0202 -2.1352 -1.1992 8 6 -0.4895 -2.8563 -2.4486 9 6 -2.0195 -2.8564 -2.4489 10 1 -2.3831 -3.3701 -1.5590 11 7 -2.5076 -3.5463 -3.6456 12 6 -3.7679 -4.1326 -3.6442 13 6 -4.5647 -4.0695 -2.5038 14 7 -5.7641 -4.6219 -2.5016 15 6 -6.2101 -5.2450 -3.5770 16 6 -5.4169 -5.3176 -4.7210 17 6 -5.9171 -6.0176 -5.9285 18 6 -5.8775 -5.5706 -7.2113 19 6 -5.3080 -4.2520 -7.6674 20 8 -5.6040 -3.2445 -6.6983 21 14 -6.0649 -3.7815 -9.3035 22 8 -6.4305 -6.5005 -8.0018 23 6 -6.8376 -7.5566 -7.2813 24 6 -6.5503 -7.3403 -5.9870 25 7 -4.2100 -4.7578 -4.7270 26 6 -2.5295 -1.4138 -2.4490 27 6 -2.0198 -0.6920 -1.1995 28 1 -0.3431 -2.6488 -0.3091 29 1 1.1102 -2.1351 -1.1993 30 1 -0.1259 -2.3426 -3.3384 31 1 -0.1266 -3.8841 -2.4483 32 1 -1.9512 -3.5941 -4.4387 33 1 -4.2027 -3.5641 -1.6206 34 1 -7.1900 -5.6991 -3.5702 35 1 -4.2275 -4.3421 -7.7795 36 1 -6.5496 -3.1098 -6.5471 37 1 -5.5111 -2.4831 -9.7646 38 1 -5.7913 -4.8366 -10.3119 39 1 -7.3152 -8.4402 -7.6785 40 1 -6.7481 -8.0034 -5.1577 41 1 -2.1660 -0.9000 -3.3389 42 1 -3.6195 -1.4138 -2.4497 43 1 -2.3827 0.3358 -1.1998 44 1 -2.3835 -1.2055 -0.3094 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081500_17085452.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:48 Heat of formation + Delta-G solvation = 157.121148 kcal Electronic energy + Delta-G solvation = -27049.080207 eV Core-core repulsion = 23281.777688 eV Total energy + Delta-G solvation = -3767.302519 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -44.21162 -43.58648 -42.61936 -40.08670 -38.75771 -37.00653 -36.11555 -34.41307 -34.05904 -32.53482 -31.78338 -30.38252 -27.82750 -26.40477 -26.13961 -25.75114 -24.79825 -23.54426 -23.03996 -21.87062 -21.42198 -21.24238 -20.01340 -19.91430 -19.71115 -18.85075 -18.46923 -18.17353 -18.05543 -17.83924 -17.45356 -17.08916 -16.90756 -16.58534 -16.28784 -16.14499 -15.77719 -15.43732 -15.30355 -15.05284 -14.84052 -14.69561 -14.62793 -14.28732 -14.21245 -14.16126 -13.79832 -13.53074 -13.35074 -13.19156 -13.07716 -12.72013 -12.38909 -11.40699 -11.25035 -10.83130 -10.21365 -9.75187 -5.66729 -1.24750 -1.02481 -0.42983 0.01452 0.54565 0.60695 0.63138 0.68886 0.78030 0.88923 0.92369 1.23324 1.33329 1.43961 1.53471 1.62580 1.91147 1.95395 2.06431 2.17248 2.28276 2.32343 2.34397 2.47622 2.53056 2.57736 2.66292 2.76615 2.77921 2.81410 2.95098 3.11350 3.16700 3.23311 3.36524 3.46530 3.48873 3.58549 3.61262 3.64150 3.87673 4.02588 4.32114 4.45299 4.65331 4.77340 5.32140 5.35829 5.68576 5.74524 6.18733 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.019495 B = 0.003452 C = 0.003167 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1435.957715 B = 8110.119390 C = 8838.673960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.137 4.137 8 C -0.126 4.126 9 C 0.152 3.848 10 H 0.089 0.911 11 N -0.717 5.717 12 C 0.361 3.639 13 C -0.022 4.022 14 N -0.398 5.398 15 C 0.004 3.996 16 C 0.224 3.776 17 C -0.133 4.133 18 C -0.001 4.001 19 C -0.019 4.019 20 O -0.523 6.523 21 Si 0.700 3.300 22 O -0.170 6.170 23 C -0.017 4.017 24 C -0.195 4.195 25 N -0.476 5.476 26 C -0.138 4.138 27 C -0.140 4.140 28 H 0.093 0.907 29 H 0.095 0.905 30 H 0.084 0.916 31 H 0.095 0.905 32 H 0.408 0.592 33 H 0.156 0.844 34 H 0.168 0.832 35 H 0.132 0.868 36 H 0.378 0.622 37 H -0.248 1.248 38 H -0.248 1.248 39 H 0.213 0.787 40 H 0.159 0.841 41 H 0.082 0.918 42 H 0.091 0.909 43 H 0.094 0.906 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 17.313 17.242 20.115 31.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.165 4.165 9 C 0.045 3.955 10 H 0.107 0.893 11 N -0.351 5.351 12 C 0.122 3.878 13 C -0.189 4.189 14 N -0.111 5.111 15 C -0.158 4.158 16 C 0.084 3.916 17 C -0.136 4.136 18 C -0.053 4.053 19 C -0.130 4.130 20 O -0.327 6.327 21 Si 0.599 3.401 22 O -0.067 6.067 23 C -0.083 4.083 24 C -0.215 4.215 25 N -0.198 5.198 26 C -0.178 4.178 27 C -0.178 4.178 28 H 0.111 0.889 29 H 0.114 0.886 30 H 0.103 0.897 31 H 0.113 0.887 32 H 0.245 0.755 33 H 0.173 0.827 34 H 0.186 0.814 35 H 0.149 0.851 36 H 0.226 0.774 37 H -0.172 1.172 38 H -0.172 1.172 39 H 0.229 0.771 40 H 0.177 0.823 41 H 0.101 0.899 42 H 0.109 0.891 43 H 0.112 0.888 44 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 18.022 17.440 18.929 31.421 hybrid contribution 0.785 -0.401 0.551 1.039 sum 18.807 17.039 19.480 31.992 Atomic orbital electron populations 1.42645 1.21198 1.20726 1.18812 0.73429 0.73370 0.73749 1.23588 0.99670 0.97445 0.87322 0.83846 1.22020 1.02838 0.90833 1.01864 1.21740 0.94359 1.03103 0.97283 1.21002 0.93371 0.91935 0.89148 0.89300 1.44237 1.14968 1.59609 1.16299 1.19150 0.87194 0.90796 0.90616 1.22961 0.92322 1.05667 0.97982 1.68215 1.12022 1.03839 1.26976 1.23400 1.01849 1.01413 0.89104 1.19437 0.88522 0.91430 0.92225 1.19353 1.07268 0.95845 0.91111 1.23084 1.00107 0.93343 0.88804 1.24359 1.03488 0.82007 1.03115 1.86561 1.29875 1.54167 1.62127 0.94338 0.90259 0.81177 0.74279 1.83825 1.60041 1.24661 1.38162 1.24074 1.02387 0.91441 0.90399 1.22824 1.04671 0.96109 0.97901 1.67880 1.14793 1.11094 1.26009 1.22096 1.03463 0.95464 0.96742 1.22075 0.89340 1.04232 1.02201 0.88881 0.88604 0.89748 0.88674 0.75486 0.82661 0.81446 0.85112 0.77445 1.17213 1.17217 0.77051 0.82344 0.89914 0.89060 0.88764 0.88994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.25 4.15 -4.67 -0.02 24.23 16 2 H 0.44 -17.31 8.96 -39.29 -0.35 -17.66 16 3 H 0.44 -17.27 8.96 -39.29 -0.35 -17.62 16 4 H 0.43 -16.98 8.90 -39.29 -0.35 -17.33 16 5 C 0.02 -0.76 3.02 -67.72 -0.20 -0.96 16 6 H 0.14 -4.61 8.14 -51.92 -0.42 -5.03 16 7 C -0.14 3.92 5.43 -26.73 -0.15 3.77 16 8 C -0.13 2.92 5.39 -26.73 -0.14 2.78 16 9 C 0.15 -3.10 2.15 -67.93 -0.15 -3.25 16 10 H 0.09 -1.81 6.45 -51.93 -0.34 -2.15 16 11 N -0.72 10.77 5.24 -53.84 -0.28 10.48 16 12 C 0.36 -3.80 7.64 -154.79 -1.18 -4.98 16 13 C -0.02 0.24 10.02 -17.07 -0.17 0.07 16 14 N -0.40 3.03 10.48 -12.61 -0.13 2.89 16 15 C 0.00 -0.03 10.92 -17.03 -0.19 -0.21 16 16 C 0.22 -1.58 5.51 -82.79 -0.46 -2.04 16 17 C -0.13 0.91 5.91 -103.17 -0.61 0.30 16 18 C 0.00 0.01 6.29 -35.15 -0.22 -0.21 16 19 C -0.02 0.16 2.77 36.00 0.10 0.26 16 20 O -0.52 4.58 10.95 -35.23 -0.39 4.19 16 21 Si 0.70 -5.80 32.26 -169.99 -5.48 -11.29 16 22 O -0.17 1.12 9.19 6.88 0.06 1.19 16 23 C -0.02 0.14 12.04 29.36 0.35 0.49 16 24 C -0.20 1.54 11.11 -37.51 -0.42 1.12 16 25 N -0.48 3.57 9.58 -8.79 -0.08 3.48 16 26 C -0.14 3.05 5.43 -26.71 -0.15 2.91 16 27 C -0.14 3.93 5.43 -26.71 -0.15 3.79 16 28 H 0.09 -2.68 8.14 -51.93 -0.42 -3.10 16 29 H 0.10 -2.79 8.14 -51.93 -0.42 -3.21 16 30 H 0.08 -1.92 8.14 -51.93 -0.42 -2.34 16 31 H 0.09 -1.97 8.14 -51.93 -0.42 -2.39 16 32 H 0.41 -5.95 8.73 -40.82 -0.36 -6.31 16 33 H 0.16 -2.25 6.10 -52.48 -0.32 -2.57 16 34 H 0.17 -1.49 8.06 -52.48 -0.42 -1.92 16 35 H 0.13 -1.02 7.96 -51.93 -0.41 -1.44 16 36 H 0.38 -4.39 8.70 45.56 0.40 -4.00 16 37 H -0.25 1.43 7.11 56.52 0.40 1.83 16 38 H -0.25 1.23 7.11 56.52 0.40 1.63 16 39 H 0.21 -2.44 8.06 -52.48 -0.42 -2.86 16 40 H 0.16 -1.51 8.06 -52.48 -0.42 -1.93 16 41 H 0.08 -1.75 8.14 -51.93 -0.42 -2.18 16 42 H 0.09 -1.72 7.72 -51.93 -0.40 -2.12 16 43 H 0.09 -2.68 8.14 -51.93 -0.42 -3.10 16 44 H 0.09 -2.62 8.14 -51.93 -0.42 -3.04 16 LS Contribution 356.93 15.07 5.38 5.38 Total: 1.00 -43.45 356.93 -11.00 -54.45 By element: Atomic # 1 Polarization: -92.50 SS G_CDS: -6.33 Total: -98.84 kcal Atomic # 6 Polarization: 7.55 SS G_CDS: -3.72 Total: 3.82 kcal Atomic # 7 Polarization: 41.61 SS G_CDS: -0.52 Total: 41.09 kcal Atomic # 8 Polarization: 5.70 SS G_CDS: -0.32 Total: 5.38 kcal Atomic # 14 Polarization: -5.80 SS G_CDS: -5.48 Total: -11.29 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -43.45 -11.00 -54.45 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081500_17085452.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 211.572 kcal (2) G-P(sol) polarization free energy of solvation -43.452 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 168.120 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.451 kcal (6) G-S(sol) free energy of system = (1) + (5) 157.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds