Wall clock time and date at job start Tue Mar 9 2021 12:59:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00894 * 109.47888 * 1 2 4 4 H 1.00901 * 109.46776 * 239.99945 * 1 2 3 5 5 C 1.46899 * 109.47159 * 120.00506 * 1 2 3 6 6 H 1.09002 * 109.46776 * 300.00033 * 5 1 2 7 7 C 1.53002 * 109.47000 * 59.99399 * 5 1 2 8 8 C 1.52997 * 109.46978 * 179.97438 * 7 5 1 9 9 C 1.53002 * 109.47415 * 300.00098 * 8 7 5 10 10 H 1.09002 * 109.47070 * 300.00053 * 9 8 7 11 11 N 1.46505 * 109.47411 * 179.97438 * 9 8 7 12 12 C 1.34769 * 119.99798 * 155.00053 * 11 9 8 13 13 O 1.21564 * 120.00527 * 0.02562 * 12 11 9 14 14 C 1.47712 * 119.99697 * 180.02562 * 12 11 9 15 15 C 1.40155 * 120.46241 * 179.72826 * 14 12 11 16 16 C 1.38083 * 118.38495 * 179.73246 * 15 14 12 17 17 C 1.39463 * 119.21820 * 0.51415 * 16 15 14 18 18 C 1.48226 * 119.57469 * 179.76930 * 17 16 15 19 19 C 1.39386 * 120.54260 * 4.97574 * 18 17 16 20 20 N 1.31724 * 120.58633 * 179.97438 * 19 18 17 21 21 C 1.31908 * 121.85838 * 359.97438 * 20 19 18 22 22 C 1.38326 * 121.04963 * 359.97438 * 21 20 19 23 23 C 1.50699 * 120.35673 * 180.02562 * 22 21 20 24 24 O 1.42894 * 109.47354 * 119.99802 * 23 22 21 25 25 Si 1.86303 * 109.46985 * 0.02562 * 23 22 21 26 26 C 1.38394 * 119.29252 * 359.78620 * 22 21 20 27 27 N 1.32809 * 120.85769 * 359.74361 * 17 16 15 28 28 C 1.31484 * 121.76663 * 0.02562 * 27 17 16 29 29 C 1.52997 * 109.46817 * 59.99873 * 9 8 7 30 30 C 1.52992 * 109.47482 * 300.00014 * 29 9 8 31 31 H 1.09002 * 109.47097 * 60.00187 * 7 5 1 32 32 H 1.08998 * 109.47844 * 300.00402 * 7 5 1 33 33 H 1.09000 * 109.47140 * 180.02562 * 8 7 5 34 34 H 1.09002 * 109.47497 * 60.00450 * 8 7 5 35 35 H 0.97005 * 119.99239 * 335.00029 * 11 9 8 36 36 H 1.07999 * 120.80223 * 359.97438 * 15 14 12 37 37 H 1.08001 * 120.38889 * 180.25858 * 16 15 14 38 38 H 1.08004 * 119.70676 * 359.95818 * 19 18 17 39 39 H 1.08003 * 119.46774 * 180.02562 * 21 20 19 40 40 H 1.08999 * 109.47321 * 240.00545 * 23 22 21 41 41 H 0.96704 * 114.00180 * 180.02562 * 24 23 22 42 42 H 1.48498 * 109.99975 * 59.99737 * 25 23 22 43 43 H 1.48500 * 110.00192 * 181.31927 * 25 23 22 44 44 H 1.07994 * 120.85168 * 180.23762 * 26 22 21 45 45 H 1.07997 * 119.65398 * 179.97438 * 28 27 17 46 46 H 1.09002 * 109.47153 * 60.00231 * 29 9 8 47 47 H 1.08998 * 109.47533 * 179.97438 * 29 9 8 48 48 H 1.09002 * 109.47103 * 300.00247 * 30 29 9 49 49 H 1.08996 * 109.47747 * 179.97438 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3363 -0.4757 0.8239 5 6 -0.4897 -0.6926 -1.1994 6 1 -0.1263 -0.1788 -2.0894 7 6 0.0205 -2.1351 -1.1993 8 6 -0.4901 -2.8566 -2.4481 9 6 -2.0201 -2.8567 -2.4475 10 1 -2.3830 -3.3704 -1.5572 11 7 -2.5089 -3.5471 -3.6436 12 6 -3.7308 -4.1157 -3.6413 13 8 -4.4276 -4.0554 -2.6470 14 6 -4.2235 -4.8122 -4.8472 15 6 -5.4903 -5.4118 -4.8537 16 6 -5.9101 -6.0467 -6.0057 17 6 -5.0622 -6.0796 -7.1125 18 6 -5.5028 -6.7635 -8.3516 19 6 -6.7926 -7.2819 -8.4542 20 7 -7.1853 -7.8893 -9.5551 21 6 -6.3860 -8.0313 -10.5949 22 6 -5.0919 -7.5435 -10.5718 23 6 -4.1923 -7.7138 -11.7688 24 8 -3.7893 -6.4296 -12.2485 25 14 -5.1123 -8.6175 -13.1134 26 6 -4.6335 -6.8929 -9.4396 27 7 -3.8652 -5.5057 -7.0710 28 6 -3.4309 -4.8877 -5.9947 29 6 -2.5301 -1.4143 -2.4475 30 6 -2.0197 -0.6927 -1.1987 31 1 -0.3428 -2.6489 -0.3092 32 1 1.1104 -2.1351 -1.1993 33 1 -0.1270 -3.8844 -2.4479 34 1 -0.1272 -2.3430 -3.3384 35 1 -1.9531 -3.5949 -4.4371 36 1 -6.1242 -5.3747 -3.9801 37 1 -6.8820 -6.5159 -6.0478 38 1 -7.4761 -7.1849 -7.6236 39 1 -6.7483 -8.5357 -11.4785 40 1 -3.3110 -8.2877 -11.4823 41 1 -3.2075 -6.4627 -13.0202 42 1 -6.3160 -7.8449 -13.5128 43 1 -4.2260 -8.8200 -14.2876 44 1 -3.6290 -6.4988 -9.3957 45 1 -2.4513 -4.4331 -5.9984 46 1 -2.1672 -0.9006 -3.3378 47 1 -3.6201 -1.4142 -2.4475 48 1 -2.3826 -1.2064 -0.3084 49 1 -2.3827 0.3350 -1.1989 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081518_17119696.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:18 Heat of formation + Delta-G solvation = 121.362478 kcal Electronic energy + Delta-G solvation = -30336.759413 eV Core-core repulsion = 26155.916382 eV Total energy + Delta-G solvation = -4180.843031 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.176 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -43.59840 -42.76649 -41.98375 -41.04291 -39.24547 -38.55513 -36.20861 -35.31742 -34.60444 -34.14566 -34.02225 -32.34931 -30.85631 -27.96583 -27.17076 -26.19062 -25.95663 -25.47930 -24.18605 -23.58891 -23.37260 -22.53123 -21.45175 -21.23138 -20.23123 -19.88927 -19.32123 -19.16716 -19.00313 -18.49776 -18.21652 -17.75624 -17.58020 -17.23769 -16.98952 -16.73647 -16.50057 -16.25386 -16.16346 -15.94747 -15.81799 -15.62142 -15.35181 -15.14951 -15.09574 -14.82822 -14.70151 -14.54536 -14.53640 -14.37505 -14.28633 -14.22858 -13.56347 -13.29945 -13.06933 -12.52966 -12.34521 -12.14187 -11.82868 -11.50187 -11.46825 -11.33977 -11.22408 -10.91373 -10.26663 -5.52802 -1.75033 -1.23574 -0.71959 -0.58015 -0.33810 0.63748 0.64110 0.65757 0.71951 0.79845 0.82128 1.04656 1.40805 1.44749 1.55081 1.63349 1.75814 1.90573 2.00266 2.01910 2.15580 2.18877 2.31576 2.36041 2.43635 2.46576 2.63420 2.64097 2.71692 2.80704 2.80828 2.81427 2.87432 3.00418 3.06703 3.10478 3.22515 3.24264 3.30045 3.34678 3.48261 3.54658 3.59164 3.62578 3.78502 3.94291 4.01205 4.07813 4.11384 4.40650 4.44154 4.59313 4.88188 5.14305 5.79652 5.85350 5.96781 6.22060 Molecular weight = 356.18amu Principal moments of inertia in cm(-1) A = 0.020788 B = 0.001801 C = 0.001690 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1346.632911 B =15547.422050 C =16561.896930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.024 3.976 6 H 0.144 0.856 7 C -0.138 4.138 8 C -0.128 4.128 9 C 0.141 3.859 10 H 0.098 0.902 11 N -0.728 5.728 12 C 0.574 3.426 13 O -0.526 6.526 14 C -0.205 4.205 15 C -0.004 4.004 16 C -0.167 4.167 17 C 0.210 3.790 18 C -0.120 4.120 19 C 0.133 3.867 20 N -0.473 5.473 21 C 0.125 3.875 22 C -0.131 4.131 23 C -0.071 4.071 24 O -0.536 6.536 25 Si 0.679 3.321 26 C -0.001 4.001 27 N -0.480 5.480 28 C 0.148 3.852 29 C -0.132 4.132 30 C -0.139 4.139 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.083 0.917 35 H 0.404 0.596 36 H 0.154 0.846 37 H 0.152 0.848 38 H 0.165 0.835 39 H 0.163 0.837 40 H 0.083 0.917 41 H 0.384 0.616 42 H -0.249 1.249 43 H -0.254 1.254 44 H 0.150 0.850 45 H 0.159 0.841 46 H 0.079 0.921 47 H 0.092 0.908 48 H 0.092 0.908 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.760 20.610 27.325 40.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.263 0.737 5 C -0.080 4.080 6 H 0.161 0.839 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.036 3.964 10 H 0.116 0.884 11 N -0.380 5.380 12 C 0.361 3.639 13 O -0.403 6.403 14 C -0.210 4.210 15 C -0.030 4.030 16 C -0.187 4.187 17 C 0.075 3.925 18 C -0.123 4.123 19 C -0.026 4.026 20 N -0.180 5.180 21 C -0.031 4.031 22 C -0.133 4.133 23 C -0.181 4.181 24 O -0.344 6.344 25 Si 0.579 3.421 26 C -0.027 4.027 27 N -0.188 5.188 28 C -0.012 4.012 29 C -0.171 4.171 30 C -0.178 4.178 31 H 0.111 0.889 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.102 0.898 35 H 0.240 0.760 36 H 0.171 0.829 37 H 0.169 0.831 38 H 0.182 0.818 39 H 0.180 0.820 40 H 0.101 0.899 41 H 0.233 0.767 42 H -0.174 1.174 43 H -0.179 1.179 44 H 0.168 0.832 45 H 0.176 0.824 46 H 0.098 0.902 47 H 0.111 0.889 48 H 0.110 0.890 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 19.166 20.363 26.693 38.659 hybrid contribution 1.657 1.437 0.240 2.207 sum 20.823 21.800 26.933 40.426 Atomic orbital electron populations 1.42644 1.21165 1.20726 1.18842 0.73445 0.73375 0.73730 1.23586 0.99685 0.97413 0.87287 0.83863 1.22017 1.02757 0.90882 1.01956 1.21778 0.94492 1.03048 0.97320 1.21014 0.92906 0.92401 0.90058 0.88443 1.45845 1.18133 1.57350 1.16713 1.18024 0.80978 0.77638 0.87242 1.90828 1.55995 1.59276 1.34166 1.20864 0.98056 1.06116 0.95957 1.21699 0.93527 0.89661 0.98102 1.22157 1.01937 1.01670 0.92928 1.19777 0.89170 0.91447 0.92138 1.19524 0.96137 1.02993 0.93663 1.23051 0.92639 0.91191 0.95745 1.67805 1.35753 1.14490 0.99940 1.22820 0.88908 0.94654 0.96721 1.20326 0.95748 1.01524 0.95690 1.24656 1.02077 0.90450 1.00884 1.86563 1.70359 1.26796 1.50658 0.95091 0.80792 0.87602 0.78665 1.21611 1.00214 0.91125 0.89773 1.67620 1.14650 1.09096 1.27454 1.22821 0.98387 0.92976 0.87065 1.21942 1.03649 0.94997 0.96521 1.22048 0.89249 1.04099 1.02359 0.88887 0.88578 0.88683 0.89796 0.76004 0.82856 0.83066 0.81784 0.82035 0.89934 0.76717 1.17373 1.17857 0.83228 0.82424 0.90247 0.88943 0.88958 0.88834 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.11 4.15 -4.67 -0.02 24.09 16 2 H 0.44 -17.28 8.96 -39.29 -0.35 -17.63 16 3 H 0.44 -17.19 8.96 -39.30 -0.35 -17.54 16 4 H 0.43 -16.81 8.90 -39.29 -0.35 -17.16 16 5 C 0.02 -0.77 3.03 -67.71 -0.20 -0.98 16 6 H 0.14 -4.62 8.14 -51.93 -0.42 -5.04 16 7 C -0.14 3.92 5.43 -26.73 -0.15 3.77 16 8 C -0.13 3.01 5.39 -26.73 -0.14 2.87 16 9 C 0.14 -2.82 2.45 -67.93 -0.17 -2.98 16 10 H 0.10 -1.75 7.58 -51.93 -0.39 -2.15 16 11 N -0.73 12.03 5.03 -54.79 -0.28 11.75 16 12 C 0.57 -6.72 7.74 -12.39 -0.10 -6.82 16 13 O -0.53 4.38 16.07 5.31 0.09 4.47 16 14 C -0.20 2.16 5.89 -104.77 -0.62 1.55 16 15 C 0.00 0.04 9.70 -38.92 -0.38 -0.34 16 16 C -0.17 1.55 9.45 -39.18 -0.37 1.18 16 17 C 0.21 -1.57 6.73 -82.88 -0.56 -2.12 16 18 C -0.12 0.77 5.89 -104.76 -0.62 0.15 16 19 C 0.13 -0.85 10.58 -17.17 -0.18 -1.03 16 20 N -0.47 2.10 10.35 -12.95 -0.13 1.97 16 21 C 0.13 -0.67 9.84 -17.49 -0.17 -0.84 16 22 C -0.13 0.75 5.43 -104.53 -0.57 0.19 16 23 C -0.07 0.50 2.83 36.00 0.10 0.61 16 24 O -0.54 3.18 12.75 -35.23 -0.45 2.73 16 25 Si 0.68 -4.98 29.82 -169.99 -5.07 -10.05 16 26 C 0.00 0.01 9.28 -38.92 -0.36 -0.35 16 27 N -0.48 3.74 9.49 -9.46 -0.09 3.65 16 28 C 0.15 -1.61 10.71 -17.17 -0.18 -1.80 16 29 C -0.13 2.83 5.49 -26.74 -0.15 2.69 16 30 C -0.14 3.80 5.43 -26.73 -0.15 3.65 16 31 H 0.09 -2.63 8.14 -51.93 -0.42 -3.05 16 32 H 0.10 -2.82 8.14 -51.93 -0.42 -3.24 16 33 H 0.09 -2.05 8.14 -51.93 -0.42 -2.47 16 34 H 0.08 -2.01 8.14 -51.93 -0.42 -2.43 16 35 H 0.40 -7.44 6.65 -40.82 -0.27 -7.72 16 36 H 0.15 -1.57 7.73 -52.49 -0.41 -1.97 16 37 H 0.15 -1.72 6.23 -52.49 -0.33 -2.05 16 38 H 0.17 -1.55 6.22 -52.48 -0.33 -1.88 16 39 H 0.16 -1.17 4.88 -52.48 -0.26 -1.43 16 40 H 0.08 -0.74 7.96 -51.93 -0.41 -1.16 16 41 H 0.38 -3.74 8.74 45.56 0.40 -3.34 16 42 H -0.25 1.01 7.11 56.52 0.40 1.41 16 43 H -0.25 1.30 7.11 56.52 0.40 1.70 16 44 H 0.15 -0.92 7.63 -52.49 -0.40 -1.32 16 45 H 0.16 -2.36 6.41 -52.49 -0.34 -2.69 16 46 H 0.08 -1.72 8.14 -51.93 -0.42 -2.14 16 47 H 0.09 -1.60 8.14 -51.93 -0.42 -2.03 16 48 H 0.09 -2.49 8.14 -51.93 -0.42 -2.91 16 49 H 0.09 -2.60 8.14 -51.93 -0.42 -3.02 16 LS Contribution 393.29 15.07 5.93 5.93 Total: 1.00 -45.55 393.29 -11.77 -57.32 By element: Atomic # 1 Polarization: -94.44 SS G_CDS: -6.79 Total: -101.23 kcal Atomic # 6 Polarization: 4.32 SS G_CDS: -4.95 Total: -0.63 kcal Atomic # 7 Polarization: 41.98 SS G_CDS: -0.52 Total: 41.46 kcal Atomic # 8 Polarization: 7.56 SS G_CDS: -0.36 Total: 7.20 kcal Atomic # 14 Polarization: -4.98 SS G_CDS: -5.07 Total: -10.05 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -45.55 -11.77 -57.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081518_17119696.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.683 kcal (2) G-P(sol) polarization free energy of solvation -45.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.320 kcal (6) G-S(sol) free energy of system = (1) + (5) 121.362 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds