Wall clock time and date at job start Tue Mar 9 2021 13:04:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00900 * 1 3 3 H 1.00898 * 109.47935 * 1 2 4 4 H 1.00901 * 109.47089 * 239.99796 * 1 2 3 5 5 C 1.46902 * 109.46895 * 120.00400 * 1 2 3 6 6 H 1.09005 * 109.47325 * 180.02562 * 5 1 2 7 7 C 1.52999 * 109.47005 * 299.99402 * 5 1 2 8 8 C 1.53000 * 109.47062 * 60.00055 * 7 5 1 9 9 C 1.53006 * 109.47134 * 59.99953 * 8 7 5 10 10 H 1.08996 * 109.47061 * 60.00045 * 9 8 7 11 11 C 1.50698 * 109.47142 * 180.02562 * 9 8 7 12 12 C 1.35371 * 126.73287 * 35.28604 * 11 9 8 13 13 N 1.36123 * 106.04756 * 180.11811 * 12 11 9 14 14 C 1.40250 * 125.93947 * 179.88428 * 13 12 11 15 15 C 1.38813 * 120.06270 * 179.70808 * 14 13 12 16 16 C 1.38125 * 119.93542 * 180.02562 * 15 14 13 17 17 C 1.38282 * 120.06295 * 359.97438 * 16 15 14 18 18 C 1.50701 * 119.93426 * 179.97438 * 17 16 15 19 19 O 1.42904 * 109.47094 * 299.99925 * 18 17 16 20 20 Si 1.86307 * 109.46865 * 180.02562 * 18 17 16 21 21 C 1.38276 * 120.12882 * 0.02562 * 17 16 15 22 22 C 1.38125 * 120.06543 * 359.97438 * 21 17 16 23 23 N 1.28727 * 108.11380 * 359.61501 * 13 12 11 24 24 N 1.28603 * 110.23853 * 0.24640 * 23 13 12 25 25 C 1.53001 * 109.46822 * 299.99984 * 9 8 7 26 26 C 1.52993 * 109.47315 * 59.99409 * 5 1 2 27 27 H 1.08996 * 109.47181 * 180.02562 * 7 5 1 28 28 H 1.09002 * 109.47373 * 300.00534 * 7 5 1 29 29 H 1.08996 * 109.47110 * 300.00027 * 8 7 5 30 30 H 1.09004 * 109.47392 * 180.02562 * 8 7 5 31 31 H 1.07990 * 126.97455 * 359.97112 * 12 11 9 32 32 H 1.08005 * 120.03638 * 0.02562 * 15 14 13 33 33 H 1.07997 * 119.97122 * 179.72282 * 16 15 14 34 34 H 1.08997 * 109.47308 * 60.00366 * 18 17 16 35 35 H 0.96705 * 114.00014 * 300.00348 * 19 18 17 36 36 H 1.48495 * 109.99541 * 179.97438 * 20 18 17 37 37 H 1.48493 * 109.99956 * 301.31778 * 20 18 17 38 38 H 1.08006 * 119.96626 * 180.02562 * 21 17 16 39 39 H 1.07998 * 120.02930 * 180.02562 * 22 21 17 40 40 H 1.09002 * 109.47010 * 179.97438 * 25 9 8 41 41 H 1.08996 * 109.47352 * 299.99883 * 25 9 8 42 42 H 1.09004 * 109.47142 * 179.97438 * 26 5 1 43 43 H 1.09004 * 109.46978 * 60.00381 * 26 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3365 0.9512 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4896 -0.6926 -1.1994 6 1 -1.5797 -0.6922 -1.1997 7 6 0.0203 0.0287 -2.4487 8 6 1.5503 0.0288 -2.4487 9 6 2.0605 -1.4137 -2.4486 10 1 1.6972 -1.9275 -3.3386 11 6 3.5674 -1.4136 -2.4480 12 6 4.3767 -0.5280 -1.8208 13 7 5.6504 -0.9188 -2.1003 14 6 6.8213 -0.2870 -1.6567 15 6 8.0631 -0.7956 -2.0119 16 6 9.2146 -0.1717 -1.5731 17 6 9.1312 0.9589 -0.7812 18 6 10.3895 1.6370 -0.3036 19 8 11.1560 0.7209 0.4807 20 14 9.9412 3.1180 0.7340 21 6 7.8956 1.4678 -0.4258 22 6 6.7407 0.8480 -0.8616 23 7 5.5930 -1.9723 -2.8378 24 7 4.3678 -2.2919 -3.0624 25 6 1.5505 -2.1349 -1.1993 26 6 0.0205 -2.1350 -1.1994 27 1 -0.3433 -0.4849 -3.3386 28 1 -0.3431 1.0564 -2.4487 29 1 1.9136 0.5427 -1.5587 30 1 1.9136 0.5431 -3.3384 31 1 4.0734 0.3183 -1.2224 32 1 8.1289 -1.6784 -2.6307 33 1 10.1811 -0.5694 -1.8454 34 1 10.9770 1.9596 -1.1631 35 1 10.6943 0.3916 1.2641 36 1 11.1734 3.7951 1.2116 37 1 9.1166 4.0637 -0.0602 38 1 7.8335 2.3512 0.1924 39 1 5.7759 1.2462 -0.5841 40 1 1.9135 -3.1627 -1.1995 41 1 1.9138 -1.6210 -0.3094 42 1 -0.3432 -2.6490 -2.0892 43 1 -0.3429 -2.6488 -0.3094 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_12385126_17761092.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:16 Heat of formation + Delta-G solvation = 210.858672 kcal Electronic energy + Delta-G solvation = -24451.014436 eV Core-core repulsion = 21004.724344 eV Total energy + Delta-G solvation = -3446.290093 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.161 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -45.73627 -43.90278 -41.80674 -39.12689 -38.63288 -36.59364 -34.63903 -34.14011 -33.45677 -32.63600 -31.56388 -28.21830 -26.87655 -26.07255 -25.26019 -25.15638 -23.69993 -22.93468 -22.69051 -21.70938 -21.42695 -20.79868 -19.31100 -19.17956 -18.69515 -18.44330 -17.94088 -17.53125 -17.22605 -17.15089 -17.04991 -16.76360 -16.39181 -15.93803 -15.89652 -15.78050 -15.48629 -15.45329 -15.13872 -14.97659 -14.53234 -14.36574 -14.25100 -13.79345 -13.58031 -13.47761 -13.36299 -13.08446 -12.95681 -12.93644 -12.70108 -11.59237 -11.36020 -11.24479 -10.66714 -5.90232 -1.62049 -1.16074 -0.89676 -0.27373 0.03111 0.23165 0.40883 0.69944 0.71439 0.77500 0.83191 1.20247 1.38363 1.46143 1.46938 1.58674 1.69481 1.93664 1.97813 2.13152 2.20151 2.24345 2.27665 2.31318 2.52128 2.53363 2.60547 2.64179 2.71371 2.73453 2.79435 2.96343 3.03270 3.06890 3.11638 3.18314 3.31278 3.42318 3.44736 3.55532 3.61110 3.71752 3.77436 3.91763 4.14142 4.32340 4.38025 4.70898 5.71523 6.26150 Molecular weight = 302.16amu Principal moments of inertia in cm(-1) A = 0.022628 B = 0.003330 C = 0.003039 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1237.131929 B = 8405.766117 C = 9212.482525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.640 5.640 2 H 0.428 0.572 3 H 0.436 0.564 4 H 0.437 0.563 5 C 0.030 3.970 6 H 0.147 0.853 7 C -0.143 4.143 8 C -0.130 4.130 9 C -0.005 4.005 10 H 0.108 0.892 11 C -0.020 4.020 12 C -0.051 4.051 13 N -0.232 5.232 14 C 0.113 3.887 15 C -0.093 4.093 16 C -0.069 4.069 17 C -0.101 4.101 18 C -0.074 4.074 19 O -0.534 6.534 20 Si 0.690 3.310 21 C -0.097 4.097 22 C -0.111 4.111 23 N -0.062 5.062 24 N -0.250 5.250 25 C -0.127 4.127 26 C -0.144 4.144 27 H 0.117 0.883 28 H 0.095 0.905 29 H 0.060 0.940 30 H 0.097 0.903 31 H 0.188 0.812 32 H 0.148 0.852 33 H 0.146 0.854 34 H 0.122 0.878 35 H 0.381 0.619 36 H -0.249 1.249 37 H -0.256 1.256 38 H 0.143 0.857 39 H 0.135 0.865 40 H 0.098 0.902 41 H 0.060 0.940 42 H 0.117 0.883 43 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.608 3.240 9.069 28.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.040 5.040 2 H 0.260 0.740 3 H 0.264 0.736 4 H 0.265 0.735 5 C -0.073 4.073 6 H 0.164 0.836 7 C -0.181 4.181 8 C -0.168 4.168 9 C -0.025 4.025 10 H 0.126 0.874 11 C -0.157 4.157 12 C -0.200 4.200 13 N -0.018 5.018 14 C 0.022 3.978 15 C -0.113 4.113 16 C -0.088 4.088 17 C -0.102 4.102 18 C -0.185 4.185 19 O -0.339 6.339 20 Si 0.591 3.409 21 C -0.115 4.115 22 C -0.131 4.131 23 N -0.040 5.040 24 N -0.116 5.116 25 C -0.165 4.165 26 C -0.182 4.182 27 H 0.135 0.865 28 H 0.113 0.887 29 H 0.078 0.922 30 H 0.116 0.884 31 H 0.205 0.795 32 H 0.165 0.835 33 H 0.164 0.836 34 H 0.139 0.861 35 H 0.228 0.772 36 H -0.173 1.173 37 H -0.181 1.181 38 H 0.160 0.840 39 H 0.153 0.847 40 H 0.116 0.884 41 H 0.078 0.922 42 H 0.135 0.865 43 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -25.403 2.976 7.670 26.701 hybrid contribution -0.137 0.788 0.217 0.829 sum -25.540 3.764 7.886 26.993 Atomic orbital electron populations 1.42875 1.21484 1.20699 1.18982 0.74029 0.73554 0.73480 1.23461 1.03912 0.95816 0.84122 0.83552 1.22161 0.96474 1.02472 0.96985 1.21842 0.94097 0.96573 1.04295 1.19503 0.86590 0.95948 1.00508 0.87361 1.21683 0.96910 0.95515 1.01628 1.23329 0.83378 1.04948 1.08333 1.44715 1.05873 1.18980 1.32229 1.17686 0.83358 0.95480 1.01278 1.21126 0.89780 1.00814 0.99603 1.21109 0.98785 0.94010 0.94861 1.20693 0.95495 0.96442 0.97564 1.25169 0.92120 1.01011 1.00178 1.86581 1.42628 1.63689 1.41005 0.95010 0.83428 0.76725 0.85744 1.20934 0.91085 0.99771 0.99697 1.20703 0.99883 0.94140 0.98413 1.78553 1.15607 1.00311 1.09549 1.75195 0.95249 1.22403 1.18749 1.21809 0.93702 1.04284 0.96720 1.22180 0.96650 0.91889 1.07440 0.86486 0.88670 0.92169 0.88394 0.79480 0.83456 0.83622 0.86122 0.77175 1.17346 1.18110 0.83961 0.84707 0.88370 0.92158 0.86493 0.88699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 23.73 4.05 -4.67 -0.02 23.71 16 2 H 0.43 -15.79 5.25 -39.29 -0.21 -16.00 16 3 H 0.44 -17.11 8.96 -39.29 -0.35 -17.46 16 4 H 0.44 -17.02 8.96 -39.29 -0.35 -17.37 16 5 C 0.03 -0.98 3.50 -67.72 -0.24 -1.22 16 6 H 0.15 -4.83 8.14 -51.93 -0.42 -5.25 16 7 C -0.14 4.08 5.59 -26.73 -0.15 3.93 16 8 C -0.13 3.32 4.54 -26.73 -0.12 3.20 16 9 C -0.01 0.11 2.65 -91.77 -0.24 -0.13 16 10 H 0.11 -2.11 8.14 -51.93 -0.42 -2.53 16 11 C -0.02 0.31 6.16 -82.77 -0.51 -0.20 16 12 C -0.05 0.83 10.10 -16.67 -0.17 0.66 16 13 N -0.23 2.66 3.56 -10.48 -0.04 2.62 16 14 C 0.11 -1.30 6.68 -83.58 -0.56 -1.86 16 15 C -0.09 0.95 9.62 -39.41 -0.38 0.57 16 16 C -0.07 0.72 9.60 -39.61 -0.38 0.34 16 17 C -0.10 1.14 5.39 -104.59 -0.56 0.58 16 18 C -0.07 0.78 2.82 36.01 0.10 0.88 16 19 O -0.53 5.00 12.77 -35.23 -0.45 4.55 16 20 Si 0.69 -7.70 29.78 -169.99 -5.06 -12.76 16 21 C -0.10 1.28 8.66 -39.61 -0.34 0.94 16 22 C -0.11 1.56 9.46 -39.41 -0.37 1.19 16 23 N -0.06 0.50 12.42 60.35 0.75 1.25 16 24 N -0.25 2.35 12.39 33.29 0.41 2.76 16 25 C -0.13 3.12 4.92 -26.73 -0.13 2.99 16 26 C -0.14 4.03 5.59 -26.73 -0.15 3.88 16 27 H 0.12 -3.05 8.14 -51.93 -0.42 -3.48 16 28 H 0.09 -2.78 8.14 -51.93 -0.42 -3.20 16 29 H 0.06 -1.74 5.89 -51.93 -0.31 -2.05 16 30 H 0.10 -2.18 8.14 -51.93 -0.42 -2.60 16 31 H 0.19 -4.08 6.54 -52.49 -0.34 -4.42 16 32 H 0.15 -1.42 7.69 -52.48 -0.40 -1.82 16 33 H 0.15 -1.53 8.06 -52.49 -0.42 -1.95 16 34 H 0.12 -1.18 7.96 -51.93 -0.41 -1.59 16 35 H 0.38 -5.12 8.70 45.56 0.40 -4.73 16 36 H -0.25 1.65 7.11 56.52 0.40 2.05 16 37 H -0.26 2.39 7.11 56.52 0.40 2.79 16 38 H 0.14 -2.17 4.87 -52.48 -0.26 -2.43 16 39 H 0.14 -2.44 6.77 -52.49 -0.36 -2.79 16 40 H 0.10 -2.01 8.14 -51.93 -0.42 -2.43 16 41 H 0.06 -1.65 6.65 -51.93 -0.35 -2.00 16 42 H 0.12 -3.00 8.14 -51.93 -0.42 -3.43 16 43 H 0.09 -2.71 8.14 -51.93 -0.42 -3.13 16 LS Contribution 335.89 15.07 5.06 5.06 Total: 1.00 -43.37 335.89 -9.49 -52.86 By element: Atomic # 1 Polarization: -89.87 SS G_CDS: -5.94 Total: -95.81 kcal Atomic # 6 Polarization: 19.95 SS G_CDS: -4.21 Total: 15.74 kcal Atomic # 7 Polarization: 29.24 SS G_CDS: 1.11 Total: 30.35 kcal Atomic # 8 Polarization: 5.00 SS G_CDS: -0.45 Total: 4.55 kcal Atomic # 14 Polarization: -7.70 SS G_CDS: -5.06 Total: -12.76 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -43.37 -9.49 -52.86 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_12385126_17761092.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 263.718 kcal (2) G-P(sol) polarization free energy of solvation -43.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 220.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -52.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 210.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds