Wall clock time and date at job start Tue Mar 9 2021 13:04:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00899 * 1 3 3 H 1.00906 * 109.47213 * 1 2 4 4 H 1.00893 * 109.47238 * 239.99337 * 1 2 3 5 5 C 1.46900 * 109.47194 * 119.99471 * 1 2 3 6 6 C 1.52997 * 109.47020 * 60.00083 * 5 1 2 7 7 H 1.09002 * 109.47497 * 54.99778 * 6 5 1 8 8 C 1.53002 * 109.47415 * 175.00130 * 6 5 1 9 9 C 1.53000 * 109.47233 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.47060 * 299.99657 * 9 8 6 11 11 H 1.09002 * 109.47153 * 300.00319 * 10 9 8 12 12 C 1.50697 * 109.47466 * 180.02562 * 10 9 8 13 13 C 1.35364 * 126.73402 * 274.71525 * 12 10 9 14 14 N 1.36110 * 106.05629 * 179.85169 * 13 12 10 15 15 C 1.40247 * 125.95160 * 180.16866 * 14 13 12 16 16 C 1.38823 * 120.05692 * 0.04157 * 15 14 13 17 17 C 1.38135 * 119.92992 * 179.74099 * 16 15 14 18 18 C 1.38273 * 120.06468 * 0.50385 * 17 16 15 19 19 C 1.50696 * 119.93432 * 179.74144 * 18 17 16 20 20 O 1.42900 * 109.47132 * 120.02442 * 19 18 17 21 21 Si 1.86295 * 109.47082 * 0.02771 * 19 18 17 22 22 C 1.38281 * 120.13053 * 359.76993 * 18 17 16 23 23 C 1.38122 * 120.06255 * 359.97438 * 22 18 17 24 24 N 1.28735 * 108.11007 * 0.41437 * 14 13 12 25 25 N 1.28596 * 110.23529 * 359.73748 * 24 14 13 26 26 C 1.52999 * 109.47317 * 59.99960 * 10 9 8 27 27 C 1.52997 * 109.47232 * 295.00004 * 6 5 1 28 28 H 1.09000 * 109.47380 * 300.00360 * 5 1 2 29 29 H 1.09001 * 109.47215 * 180.02562 * 5 1 2 30 30 H 1.08992 * 109.47063 * 59.99950 * 8 6 5 31 31 H 1.09004 * 109.46733 * 299.99664 * 8 6 5 32 32 H 1.09002 * 109.47398 * 59.99826 * 9 8 6 33 33 H 1.09001 * 109.47194 * 180.02562 * 9 8 6 34 34 H 1.08003 * 126.97214 * 359.97438 * 13 12 10 35 35 H 1.07991 * 120.03726 * 359.97438 * 16 15 14 36 36 H 1.07998 * 119.96429 * 180.24799 * 17 16 15 37 37 H 1.09004 * 109.47371 * 240.02130 * 19 18 17 38 38 H 0.96702 * 114.00368 * 179.97438 * 20 19 18 39 39 H 1.48501 * 110.00437 * 59.99833 * 21 19 18 40 40 H 1.48501 * 110.00055 * 181.31885 * 21 19 18 41 41 H 1.08000 * 119.96773 * 179.97438 * 22 18 17 42 42 H 1.08006 * 120.03055 * 179.97438 * 23 22 18 43 43 H 1.09000 * 109.47486 * 180.02562 * 26 10 9 44 44 H 1.09002 * 109.46716 * 60.00091 * 26 10 9 45 45 H 1.09002 * 109.47153 * 299.99992 * 27 6 5 46 46 H 1.09001 * 109.47289 * 60.00075 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3363 -0.4757 0.8237 5 6 -0.4897 -0.6924 -1.1995 6 6 0.0203 -2.1349 -1.1996 7 1 -0.2680 -2.6223 -0.2682 8 6 -0.5897 -2.8915 -2.3813 9 6 -0.0802 -4.3341 -2.3810 10 6 1.4446 -4.3365 -2.5064 11 1 1.7333 -3.8493 -3.4378 12 6 1.9465 -5.7574 -2.5068 13 6 2.2210 -6.5193 -1.4221 14 7 2.6398 -7.7218 -1.9030 15 6 3.0290 -8.8267 -1.1318 16 6 3.0063 -8.7499 0.2541 17 6 3.3851 -9.8415 1.0111 18 6 3.7965 -11.0062 0.3898 19 6 4.2147 -12.1934 1.2185 20 8 3.3705 -13.3062 0.9166 21 14 4.0639 -11.7723 3.0270 22 6 3.8255 -11.0837 -0.9905 23 6 3.4429 -9.9972 -1.7527 24 7 2.6214 -7.6669 -3.1890 25 7 2.2136 -6.5113 -3.5791 26 6 2.0547 -3.5799 -1.3248 27 6 1.5451 -2.1367 -1.3253 28 1 -0.1263 -0.1785 -2.0895 29 1 -1.5797 -0.6920 -1.1997 30 1 -0.3014 -2.4041 -3.3126 31 1 -1.6761 -2.8902 -2.2917 32 1 -0.3689 -4.8213 -1.4496 33 1 -0.5144 -4.8730 -3.2231 34 1 2.1251 -6.2321 -0.3854 35 1 2.6893 -7.8390 0.7399 36 1 3.3639 -9.7837 2.0893 37 1 5.2493 -12.4497 0.9901 38 1 3.5829 -14.1075 1.4145 39 1 2.6579 -11.4210 3.3513 40 1 4.5036 -12.9239 3.8550 41 1 4.1477 -11.9946 -1.4731 42 1 3.4661 -10.0581 -2.8308 43 1 3.1411 -3.5811 -1.4144 44 1 1.7660 -4.0670 -0.3934 45 1 1.8335 -1.6493 -2.2567 46 1 1.9798 -1.5978 -0.4835 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_12385126_17850172.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:27 Heat of formation + Delta-G solvation = 202.936308 kcal Electronic energy + Delta-G solvation = -25943.883449 eV Core-core repulsion = 22341.712198 eV Total energy + Delta-G solvation = -3602.171251 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.177 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -45.37824 -43.02323 -41.53952 -40.32378 -38.64498 -36.63460 -35.30950 -33.45956 -33.32398 -32.49048 -32.02191 -28.88036 -27.94789 -25.86167 -25.45708 -24.88076 -24.50489 -23.37451 -22.63044 -22.26007 -21.65157 -21.29894 -20.44712 -19.48949 -19.26869 -18.38629 -18.14266 -17.89334 -17.56563 -17.26961 -17.08817 -16.80630 -16.70139 -16.10809 -16.06644 -15.83985 -15.38394 -15.31294 -15.00528 -14.92994 -14.85401 -14.60122 -14.54222 -14.02525 -13.90286 -13.73594 -13.32024 -13.30640 -13.03276 -12.98826 -12.94815 -12.62086 -12.57030 -12.49704 -11.28703 -11.20008 -10.98678 -10.39387 -5.70083 -1.33662 -1.17721 -0.64883 0.03863 0.34689 0.52250 0.58065 0.70184 0.83983 0.89186 0.89735 1.25840 1.51932 1.57405 1.68317 1.76054 2.00113 2.05264 2.17577 2.36679 2.43800 2.48620 2.62958 2.63809 2.70470 2.73719 2.82149 2.87989 2.90301 3.01419 3.12412 3.15148 3.22131 3.30197 3.31514 3.34635 3.46645 3.57341 3.60069 3.66856 3.67290 3.75205 3.97658 4.00266 4.04814 4.08383 4.18377 4.41453 4.56346 4.64024 4.97831 5.70830 6.58260 Molecular weight = 316.18amu Principal moments of inertia in cm(-1) A = 0.020449 B = 0.002704 C = 0.002471 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1368.957323 B =10353.234250 C =11328.070518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.639 5.639 2 H 0.433 0.567 3 H 0.439 0.561 4 H 0.435 0.565 5 C -0.007 4.007 6 C -0.118 4.118 7 H 0.097 0.903 8 C -0.111 4.111 9 C -0.113 4.113 10 C 0.000 4.000 11 H 0.095 0.905 12 C -0.015 4.015 13 C -0.046 4.046 14 N -0.236 5.236 15 C 0.117 3.883 16 C -0.110 4.110 17 C -0.094 4.094 18 C -0.057 4.057 19 C -0.081 4.081 20 O -0.535 6.535 21 Si 0.682 3.318 22 C -0.069 4.069 23 C -0.096 4.096 24 N -0.068 5.068 25 N -0.255 5.255 26 C -0.114 4.114 27 C -0.129 4.129 28 H 0.135 0.865 29 H 0.136 0.864 30 H 0.079 0.921 31 H 0.078 0.922 32 H 0.069 0.931 33 H 0.080 0.920 34 H 0.190 0.810 35 H 0.138 0.862 36 H 0.143 0.857 37 H 0.085 0.915 38 H 0.386 0.614 39 H -0.253 1.253 40 H -0.256 1.256 41 H 0.143 0.857 42 H 0.147 0.853 43 H 0.079 0.921 44 H 0.071 0.929 45 H 0.083 0.917 46 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.277 32.884 8.548 34.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.036 5.036 2 H 0.263 0.737 3 H 0.267 0.733 4 H 0.263 0.737 5 C -0.130 4.130 6 C -0.137 4.137 7 H 0.115 0.885 8 C -0.149 4.149 9 C -0.151 4.151 10 C -0.020 4.020 11 H 0.114 0.886 12 C -0.152 4.152 13 C -0.194 4.194 14 N -0.022 5.022 15 C 0.026 3.974 16 C -0.131 4.131 17 C -0.112 4.112 18 C -0.058 4.058 19 C -0.191 4.191 20 O -0.343 6.343 21 Si 0.582 3.418 22 C -0.087 4.087 23 C -0.115 4.115 24 N -0.046 5.046 25 N -0.121 5.121 26 C -0.152 4.152 27 C -0.166 4.166 28 H 0.154 0.846 29 H 0.154 0.846 30 H 0.098 0.902 31 H 0.097 0.903 32 H 0.088 0.912 33 H 0.098 0.902 34 H 0.207 0.793 35 H 0.155 0.845 36 H 0.160 0.840 37 H 0.102 0.898 38 H 0.235 0.765 39 H -0.178 1.178 40 H -0.181 1.181 41 H 0.161 0.839 42 H 0.165 0.835 43 H 0.098 0.902 44 H 0.090 0.910 45 H 0.102 0.898 46 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -8.758 32.245 7.306 34.203 hybrid contribution -0.223 -0.711 1.042 1.282 sum -8.981 31.534 8.348 33.834 Atomic orbital electron populations 1.42451 1.21421 1.20729 1.19046 0.73746 0.73277 0.73684 1.23971 1.05206 0.96726 0.87119 1.21829 0.97190 0.91431 1.03212 0.88503 1.21521 1.00789 0.95909 0.96721 1.21588 0.93995 0.95697 1.03800 1.19436 0.94665 0.87694 1.00205 0.88636 1.21781 1.06116 0.98443 0.88907 1.23411 1.08018 0.86059 1.01950 1.44682 1.41348 1.10174 1.06023 1.17674 1.03931 0.85979 0.89827 1.20720 1.01939 1.00134 0.90316 1.20835 0.98253 0.92142 0.99959 1.19520 0.98234 0.93876 0.94141 1.24847 0.96471 0.87681 1.10080 1.86567 1.58466 1.22007 1.67235 0.95281 0.84652 0.88203 0.73664 1.21041 0.96833 0.98113 0.92748 1.21081 0.97859 0.90772 1.01824 1.78483 1.18418 1.16055 0.91643 1.75141 1.13505 0.97591 1.25823 1.21585 1.01593 0.93569 0.98454 1.21823 0.92825 0.99100 1.02872 0.84641 0.84606 0.90249 0.90298 0.91196 0.90161 0.79283 0.84468 0.83995 0.89752 0.76545 1.17763 1.18105 0.83898 0.83505 0.90248 0.91021 0.89808 0.91963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.58 4.48 -10.37 -0.05 24.53 16 2 H 0.43 -16.83 7.26 -39.29 -0.29 -17.11 16 3 H 0.44 -17.64 9.03 -39.29 -0.35 -18.00 16 4 H 0.44 -17.24 8.96 -39.30 -0.35 -17.59 16 5 C -0.01 0.23 6.01 -3.83 -0.02 0.20 16 6 C -0.12 3.28 2.35 -90.62 -0.21 3.07 16 7 H 0.10 -2.77 8.14 -51.93 -0.42 -3.19 16 8 C -0.11 2.50 5.20 -26.73 -0.14 2.36 16 9 C -0.11 1.99 5.19 -26.73 -0.14 1.85 16 10 C 0.00 -0.01 2.65 -91.78 -0.24 -0.25 16 11 H 0.10 -1.45 8.14 -51.93 -0.42 -1.87 16 12 C -0.02 0.17 6.16 -82.77 -0.51 -0.34 16 13 C -0.05 0.53 10.09 -16.68 -0.17 0.36 16 14 N -0.24 1.82 3.56 -10.48 -0.04 1.79 16 15 C 0.12 -0.95 6.68 -83.58 -0.56 -1.51 16 16 C -0.11 1.17 9.46 -39.40 -0.37 0.79 16 17 C -0.09 0.94 8.66 -39.61 -0.34 0.59 16 18 C -0.06 0.47 5.43 -104.60 -0.57 -0.10 16 19 C -0.08 0.71 2.81 36.00 0.10 0.81 16 20 O -0.53 3.69 12.74 -35.23 -0.45 3.24 16 21 Si 0.68 -6.45 29.78 -169.99 -5.06 -11.51 16 22 C -0.07 0.53 9.60 -39.61 -0.38 0.15 16 23 C -0.10 0.70 9.62 -39.41 -0.38 0.32 16 24 N -0.07 0.33 12.42 60.35 0.75 1.08 16 25 N -0.25 1.48 12.39 33.29 0.41 1.89 16 26 C -0.11 2.31 4.80 -26.71 -0.13 2.18 16 27 C -0.13 3.31 4.96 -26.71 -0.13 3.18 16 28 H 0.14 -4.45 8.14 -51.93 -0.42 -4.87 16 29 H 0.14 -4.50 8.14 -51.93 -0.42 -4.92 16 30 H 0.08 -1.73 8.14 -51.93 -0.42 -2.15 16 31 H 0.08 -1.76 8.14 -51.93 -0.42 -2.18 16 32 H 0.07 -1.23 8.14 -51.93 -0.42 -1.66 16 33 H 0.08 -1.15 8.14 -51.93 -0.42 -1.58 16 34 H 0.19 -3.02 6.53 -52.48 -0.34 -3.37 16 35 H 0.14 -1.93 6.77 -52.49 -0.36 -2.29 16 36 H 0.14 -1.72 4.87 -52.49 -0.26 -1.98 16 37 H 0.08 -0.86 7.96 -51.93 -0.41 -1.28 16 38 H 0.39 -4.00 8.74 45.56 0.40 -3.60 16 39 H -0.25 1.69 7.11 56.52 0.40 2.09 16 40 H -0.26 1.67 7.11 56.52 0.40 2.07 16 41 H 0.14 -1.18 8.06 -52.49 -0.42 -1.60 16 42 H 0.15 -1.04 7.69 -52.48 -0.40 -1.45 16 43 H 0.08 -1.44 8.14 -51.93 -0.42 -1.87 16 44 H 0.07 -1.50 7.37 -51.93 -0.38 -1.89 16 45 H 0.08 -2.07 8.14 -51.93 -0.42 -2.49 16 46 H 0.06 -1.80 6.75 -51.93 -0.35 -2.15 16 LS Contribution 360.67 15.07 5.44 5.44 Total: 1.00 -44.64 360.67 -10.14 -54.78 By element: Atomic # 1 Polarization: -87.97 SS G_CDS: -6.95 Total: -94.92 kcal Atomic # 6 Polarization: 17.87 SS G_CDS: -4.19 Total: 13.68 kcal Atomic # 7 Polarization: 28.21 SS G_CDS: 1.08 Total: 29.29 kcal Atomic # 8 Polarization: 3.69 SS G_CDS: -0.45 Total: 3.24 kcal Atomic # 14 Polarization: -6.45 SS G_CDS: -5.06 Total: -11.51 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -44.64 -10.14 -54.78 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_12385126_17850172.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 257.720 kcal (2) G-P(sol) polarization free energy of solvation -44.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 213.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.783 kcal (6) G-S(sol) free energy of system = (1) + (5) 202.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds