Wall clock time and date at job start Tue Mar 9 2021 13:13:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.35950 * 126.47999 * 2 1 4 4 N 1.39439 * 125.75844 * 0.02562 * 3 2 1 5 5 C 1.36370 * 126.87208 * 179.97438 * 4 3 2 6 6 C 1.34964 * 106.76841 * 179.97438 * 5 4 3 7 7 C 1.50699 * 125.48814 * 180.26326 * 6 5 4 8 8 H 1.09000 * 109.47724 * 204.71909 * 7 6 5 9 9 C 1.52996 * 109.47243 * 324.72250 * 7 6 5 10 10 C 1.53006 * 109.47501 * 179.97438 * 9 7 6 11 11 C 1.52994 * 109.46865 * 299.99931 * 10 9 7 12 12 H 1.08998 * 109.47549 * 300.00183 * 11 10 9 13 13 C 1.52998 * 109.47233 * 179.97438 * 11 10 9 14 14 O 1.42901 * 109.47271 * 64.99788 * 13 11 10 15 15 C 1.53004 * 109.47393 * 59.99972 * 11 10 9 16 16 C 1.52998 * 109.46736 * 300.00066 * 15 11 10 17 17 N 1.33370 * 109.02490 * 0.02562 * 6 5 4 18 18 N 1.28773 * 109.93312 * 359.97438 * 17 6 5 19 19 N 1.31069 * 108.48483 * 180.26209 * 3 2 1 20 20 C 1.34169 * 109.30362 * 359.57154 * 19 3 2 21 21 Cl 1.73596 * 125.87045 * 180.13602 * 20 19 3 22 22 C 1.34689 * 108.25746 * 0.43296 * 20 19 3 23 23 C 1.50698 * 126.54540 * 179.74298 * 22 20 19 24 24 O 1.42908 * 109.47346 * 66.46793 * 23 22 20 25 25 Si 1.86292 * 109.47306 * 306.46461 * 23 22 20 26 26 H 1.09001 * 109.46894 * 89.97308 * 1 2 3 27 27 H 1.08991 * 109.47387 * 209.97476 * 1 2 3 28 28 H 1.09002 * 109.46559 * 329.97520 * 1 2 3 29 29 H 1.07991 * 126.61305 * 0.02562 * 5 4 3 30 30 H 1.09003 * 109.47416 * 300.00093 * 9 7 6 31 31 H 1.08997 * 109.47364 * 59.99918 * 9 7 6 32 32 H 1.08996 * 109.47066 * 179.97438 * 10 9 7 33 33 H 1.08997 * 109.46791 * 59.99675 * 10 9 7 34 34 H 1.09003 * 109.47559 * 185.00070 * 13 11 10 35 35 H 1.08999 * 109.47280 * 305.00149 * 13 11 10 36 36 H 0.96702 * 114.00213 * 180.02562 * 14 13 11 37 37 H 1.09000 * 109.47666 * 180.02562 * 15 11 10 38 38 H 1.09002 * 109.46987 * 59.99315 * 15 11 10 39 39 H 1.09006 * 109.47485 * 299.99423 * 16 15 11 40 40 H 1.09001 * 109.47365 * 179.97438 * 16 15 11 41 41 H 1.09003 * 109.47318 * 186.46377 * 23 22 20 42 42 H 0.96703 * 113.99342 * 299.99786 * 24 23 22 43 43 H 1.48507 * 110.00428 * 174.88774 * 25 23 22 44 44 H 1.48499 * 110.00180 * 296.20979 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2733 1.0931 0.0000 4 7 1.8479 2.4211 0.0005 5 6 2.6372 3.5331 0.0010 6 6 1.8088 4.5986 0.0008 7 6 2.2405 6.0424 -0.0044 8 1 1.4517 6.6592 0.4262 9 6 3.5175 6.1959 0.8241 10 6 3.9562 7.6617 0.8183 11 6 4.2250 8.1079 -0.6202 12 1 5.0137 7.4908 -1.0507 13 6 4.6631 9.5738 -0.6262 14 8 5.9163 9.6992 0.0490 15 6 2.9480 7.9544 -1.4489 16 6 2.5094 6.4887 -1.4430 17 7 0.5466 4.1679 0.0008 18 7 0.5220 2.8804 0.0004 19 7 3.5198 0.6882 -0.0057 20 6 3.5505 -0.6531 0.0000 21 17 4.9801 -1.6379 -0.0009 22 6 2.2814 -1.1042 -0.0001 23 6 1.8414 -2.5455 -0.0001 24 8 2.2167 -3.1583 1.2352 25 14 2.6585 -3.4443 -1.4126 26 1 -0.3633 0.0005 -1.0277 27 1 -0.3634 -0.8901 0.5134 28 1 -0.3632 0.8898 0.5142 29 1 3.7169 3.5566 0.0007 30 1 3.3262 5.8777 1.8490 31 1 4.3064 5.5793 0.3935 32 1 4.8657 7.7711 1.4090 33 1 3.1674 8.2787 1.2487 34 1 4.7688 9.9173 -1.6553 35 1 3.9136 10.1791 -0.1163 36 1 6.2554 10.6041 0.0839 37 1 3.1396 8.2718 -2.4739 38 1 2.1592 8.5714 -1.0185 39 1 3.2981 5.8715 -1.8734 40 1 1.5994 6.3793 -2.0330 41 1 0.7586 -2.5949 -0.1159 42 1 3.1687 -3.1506 1.4047 43 1 2.3309 -4.8915 -1.3512 44 1 2.2048 -2.8753 -2.7070 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273910_15713346_14775216.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:02 Heat of formation + Delta-G solvation = 80.167305 kcal Electronic energy + Delta-G solvation = -29169.686674 eV Core-core repulsion = 24960.165744 eV Total energy + Delta-G solvation = -4209.520930 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.125 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -44.13367 -43.25494 -39.93411 -38.35581 -37.89740 -37.40385 -35.71852 -35.53227 -33.85810 -31.70973 -31.52876 -30.45698 -28.48049 -27.27331 -26.52849 -25.18484 -23.60487 -23.41549 -22.41372 -22.06599 -21.17792 -20.54522 -19.44089 -18.65815 -18.17600 -18.09147 -17.44965 -16.73662 -16.58241 -16.41134 -16.13721 -16.06659 -15.87914 -15.42268 -15.25597 -14.98715 -14.73718 -14.64399 -14.37926 -14.21017 -13.83190 -13.56972 -13.55157 -13.12897 -13.04085 -12.87442 -12.80529 -12.64933 -12.59502 -12.38960 -12.21428 -12.00905 -11.92940 -11.69363 -11.40744 -11.22834 -11.19251 -11.15069 -10.89746 -10.75246 -10.34989 -9.50113 -5.03170 -0.64666 0.08891 0.38452 0.41206 1.04801 1.17220 1.36783 1.45678 1.55541 1.82861 2.77730 3.01690 3.13884 3.32655 3.36693 3.48312 3.54564 3.66840 3.76991 3.82831 3.90496 4.02777 4.09740 4.15779 4.21764 4.30909 4.39301 4.42557 4.49223 4.51279 4.58725 4.60927 4.64259 4.68364 4.76324 4.79949 4.89630 5.02472 5.12631 5.17658 5.23819 5.24762 5.33811 5.48715 5.54845 5.57564 6.01366 6.35533 6.74988 6.93726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.429 5.429 3 C 0.433 3.567 4 N -0.304 5.304 5 C 0.075 3.925 6 C -0.028 4.028 7 C 0.003 3.997 8 H 0.091 0.909 9 C -0.110 4.110 10 C -0.105 4.105 11 C -0.088 4.088 12 H 0.071 0.929 13 C 0.075 3.925 14 O -0.595 6.595 15 C -0.107 4.107 16 C -0.105 4.105 17 N -0.229 5.229 18 N -0.084 5.084 19 N -0.472 5.472 20 C 0.059 3.941 21 Cl 0.057 6.943 22 C 0.000 4.000 23 C -0.038 4.038 24 O -0.537 6.537 25 Si 0.738 3.262 26 H 0.101 0.899 27 H 0.118 0.882 28 H 0.102 0.898 29 H 0.224 0.776 30 H 0.066 0.934 31 H 0.075 0.925 32 H 0.063 0.937 33 H 0.064 0.936 34 H 0.052 0.948 35 H 0.052 0.948 36 H 0.394 0.606 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.069 0.931 40 H 0.062 0.938 41 H 0.133 0.867 42 H 0.392 0.608 43 H -0.257 1.257 44 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.927 0.881 -1.104 2.389 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.114 5.114 3 C 0.083 3.917 4 N -0.088 5.088 5 C -0.075 4.075 6 C -0.165 4.165 7 C -0.017 4.017 8 H 0.109 0.891 9 C -0.148 4.148 10 C -0.142 4.142 11 C -0.107 4.107 12 H 0.089 0.911 13 C -0.002 4.002 14 O -0.403 6.403 15 C -0.144 4.144 16 C -0.143 4.143 17 N -0.099 5.099 18 N -0.062 5.062 19 N -0.197 5.197 20 C -0.098 4.098 21 Cl 0.085 6.915 22 C -0.119 4.119 23 C -0.149 4.149 24 O -0.344 6.344 25 Si 0.638 3.362 26 H 0.119 0.881 27 H 0.137 0.863 28 H 0.120 0.880 29 H 0.240 0.760 30 H 0.085 0.915 31 H 0.093 0.907 32 H 0.081 0.919 33 H 0.083 0.917 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.244 0.756 37 H 0.092 0.908 38 H 0.090 0.910 39 H 0.087 0.913 40 H 0.081 0.919 41 H 0.151 0.849 42 H 0.242 0.758 43 H -0.182 1.182 44 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges 0.186 -0.345 -1.695 1.739 hybrid contribution -0.091 0.677 0.235 0.723 sum 0.095 0.333 -1.459 1.500 Atomic orbital electron populations 1.22718 0.72555 1.07212 1.06131 1.45304 1.09578 1.03559 1.52991 1.18077 0.85132 0.79324 1.09180 1.46561 1.08366 1.02008 1.51912 1.23814 1.00686 0.83015 1.00023 1.21977 0.86993 0.98369 1.09180 1.19619 0.98532 0.85944 0.97632 0.89092 1.21623 0.95826 0.97552 0.99810 1.21448 1.01291 0.95327 0.96183 1.21173 0.97707 0.95293 0.96487 0.91055 1.22309 0.85123 0.96828 0.95962 1.86428 1.38464 1.35296 1.80140 1.21470 0.96548 0.96032 1.00387 1.21532 1.01585 0.96661 0.94521 1.74242 1.21759 1.02828 1.11053 1.82111 0.94040 1.04568 1.25458 1.69843 1.15875 1.11675 1.22333 1.20361 0.88679 0.88636 1.12136 1.98389 1.34007 1.62538 1.96561 1.21876 0.89114 0.90955 1.09953 1.24860 1.05997 0.86054 0.97954 1.86543 1.31023 1.78983 1.37805 0.93206 0.92116 0.77796 0.73036 0.88101 0.86349 0.87955 0.75967 0.91496 0.90679 0.91863 0.91703 0.92969 0.92955 0.75621 0.90752 0.90974 0.91271 0.91939 0.84931 0.75778 1.18234 1.20558 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.12 10.37 127.77 1.32 1.20 16 2 N -0.43 -1.21 3.19 -533.83 -1.70 -2.91 16 3 C 0.43 2.62 8.63 259.98 2.24 4.87 16 4 N -0.30 -1.85 3.84 -195.46 -0.75 -2.60 16 5 C 0.08 0.18 10.61 83.23 0.88 1.07 16 6 C -0.03 -0.09 6.03 41.57 0.25 0.16 16 7 C 0.00 0.00 2.64 -11.54 -0.03 -0.03 16 8 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 9 C -0.11 0.29 4.78 30.59 0.15 0.44 16 10 C -0.10 0.18 5.10 30.59 0.16 0.34 16 11 C -0.09 0.20 2.43 -10.79 -0.03 0.17 16 12 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 13 C 0.08 -0.18 6.43 71.98 0.46 0.28 16 14 O -0.60 -0.23 13.20 -148.98 -1.97 -2.20 16 15 C -0.11 0.42 5.20 30.60 0.16 0.58 16 16 C -0.10 0.25 5.18 30.59 0.16 0.41 16 17 N -0.23 -1.86 12.33 -49.03 -0.60 -2.46 16 18 N -0.08 -0.67 11.42 37.02 0.42 -0.25 16 19 N -0.47 -2.92 11.14 -188.29 -2.10 -5.01 16 20 C 0.06 0.16 7.26 83.52 0.61 0.77 16 21 Cl 0.06 -0.13 25.55 -2.72 -0.07 -0.20 16 22 C 0.00 0.00 5.57 40.88 0.23 0.23 16 23 C -0.04 0.07 2.86 71.24 0.20 0.28 16 24 O -0.54 0.54 12.88 -148.98 -1.92 -1.38 16 25 Si 0.74 -1.48 30.10 68.60 2.07 0.59 16 26 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 27 H 0.12 -0.78 7.30 -2.39 -0.02 -0.80 16 28 H 0.10 0.00 6.30 -2.39 -0.02 -0.01 16 29 H 0.22 -0.60 7.34 -2.91 -0.02 -0.62 16 30 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 31 H 0.07 -0.30 7.24 -2.39 -0.02 -0.32 16 32 H 0.06 0.06 7.82 -2.39 -0.02 0.04 16 33 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 34 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 35 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 36 H 0.39 -2.95 9.12 -74.06 -0.68 -3.63 16 37 H 0.07 -0.36 8.14 -2.39 -0.02 -0.37 16 38 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 39 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 40 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.13 -0.59 6.84 -2.39 -0.02 -0.61 16 42 H 0.39 -2.45 7.77 -74.06 -0.58 -3.03 16 43 H -0.26 -0.52 7.11 99.48 0.71 0.19 16 44 H -0.28 -0.97 7.11 99.48 0.71 -0.26 16 Total: 0.00 -17.01 370.23 -0.01 -17.02 By element: Atomic # 1 Polarization: -11.18 SS G_CDS: -0.16 Total: -11.34 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: 6.77 Total: 10.74 kcal Atomic # 7 Polarization: -8.51 SS G_CDS: -4.73 Total: -13.24 kcal Atomic # 8 Polarization: 0.31 SS G_CDS: -3.88 Total: -3.58 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: 2.07 Total: 0.59 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.07 Total: -0.20 kcal Total: -17.01 -0.01 -17.02 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_15713346_14775216.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.186 kcal (2) G-P(sol) polarization free energy of solvation -17.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.018 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds