Wall clock time and date at job start Tue Mar 9 2021 13:28:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.53004 * 109.47295 * 119.99967 * 2 1 3 5 5 C 1.53010 * 112.99751 * 59.99834 * 4 2 1 6 6 N 1.46494 * 109.46950 * 309.66939 * 5 4 2 7 7 C 1.35314 * 125.86603 * 124.71514 * 6 5 4 8 8 C 1.35357 * 106.17409 * 179.90142 * 7 6 5 9 9 C 1.50698 * 126.75112 * 180.12067 * 8 7 6 10 10 H 1.08999 * 109.47594 * 205.29891 * 9 8 7 11 11 C 1.52999 * 109.47253 * 325.30399 * 9 8 7 12 12 C 1.53005 * 109.47165 * 179.97438 * 11 9 8 13 13 C 1.53002 * 109.47078 * 300.00340 * 12 11 9 14 14 H 1.09007 * 109.46594 * 299.99491 * 13 12 11 15 15 C 1.53005 * 109.47078 * 179.97438 * 13 12 11 16 16 O 1.42899 * 109.47299 * 64.99397 * 15 13 12 17 17 C 1.52992 * 109.47611 * 59.99662 * 13 12 11 18 18 C 1.53005 * 109.47175 * 300.00278 * 17 13 12 19 19 N 1.33774 * 106.49652 * 0.35485 * 8 7 6 20 20 N 1.28633 * 108.88310 * 359.77513 * 19 8 7 21 21 C 1.54033 * 113.81397 * 288.17488 * 4 2 1 22 22 O 1.44445 * 85.42595 * 223.22950 * 21 4 2 23 23 C 1.44180 * 93.37742 * 24.09167 * 22 21 4 24 24 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 25 25 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 26 26 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 27 27 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 28 28 H 1.09000 * 109.46799 * 69.67104 * 5 4 2 29 29 H 1.08993 * 109.46781 * 189.66893 * 5 4 2 30 30 H 1.08000 * 126.91463 * 0.02562 * 7 6 5 31 31 H 1.08996 * 109.47232 * 299.99414 * 11 9 8 32 32 H 1.08996 * 109.47201 * 59.99798 * 11 9 8 33 33 H 1.08992 * 109.47533 * 179.97438 * 12 11 9 34 34 H 1.09007 * 109.46992 * 59.99587 * 12 11 9 35 35 H 1.08996 * 109.46807 * 184.99458 * 15 13 12 36 36 H 1.08996 * 109.46739 * 304.99693 * 15 13 12 37 37 H 0.96699 * 114.00263 * 180.02562 * 16 15 13 38 38 H 1.08996 * 109.47443 * 180.02562 * 17 13 12 39 39 H 1.09004 * 109.47248 * 59.99723 * 17 13 12 40 40 H 1.09004 * 109.46579 * 299.99854 * 18 17 13 41 41 H 1.08999 * 109.47518 * 179.97438 * 18 17 13 42 42 H 1.08999 * 113.86741 * 337.34295 * 21 4 2 43 43 H 1.09005 * 113.86121 * 109.04781 * 21 4 2 44 44 H 1.08998 * 113.86426 * 221.76601 * 23 22 21 45 45 H 1.08999 * 113.98675 * 90.07429 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9390 -0.7213 1.2493 5 6 1.4743 -2.1768 1.3308 6 7 0.0250 -2.2388 1.1263 7 6 -0.6130 -2.9841 0.1944 8 6 -1.9348 -2.7437 0.3595 9 6 -3.0662 -3.3401 -0.4374 10 1 -3.9254 -2.6702 -0.4061 11 6 -2.6219 -3.5322 -1.8888 12 6 -3.7705 -4.1384 -2.6978 13 6 -4.1569 -5.4924 -2.0992 14 1 -3.2974 -6.1620 -2.1306 15 6 -5.3059 -6.0982 -2.9078 16 8 -4.8560 -6.3854 -4.2334 17 6 -4.6012 -5.3003 -0.6479 18 6 -3.4526 -4.6942 0.1611 19 7 -2.0389 -1.8686 1.3660 20 7 -0.8600 -1.5895 1.7986 21 6 1.7319 0.0718 2.5534 22 8 3.0753 -0.3439 2.8834 23 6 3.4467 -0.5345 1.5034 24 1 -0.3934 0.4417 -0.7651 25 1 1.7923 -0.5139 -0.8900 26 1 1.5879 2.4585 -1.2243 27 1 1.5615 2.4679 1.2085 28 1 1.9754 -2.7619 0.5597 29 1 1.7205 -2.5823 2.3121 30 1 -0.1591 -3.6403 -0.5334 31 1 -2.3463 -2.5677 -2.3151 32 1 -1.7627 -4.2022 -1.9202 33 1 -3.4542 -4.2748 -3.7319 34 1 -4.6300 -3.4687 -2.6665 35 1 -5.6402 -7.0191 -2.4301 36 1 -6.1332 -5.3898 -2.9504 37 1 -5.5342 -6.7723 -4.8038 38 1 -4.8760 -6.2650 -0.2213 39 1 -5.4606 -4.6306 -0.6165 40 1 -2.5932 -5.3639 0.1298 41 1 -3.7692 -4.5569 1.1951 42 1 1.6268 1.1464 2.4041 43 1 0.9664 -0.3465 3.2070 44 1 4.0383 -1.4326 1.3260 45 1 3.8669 0.3533 1.0309 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_16762298_14775216.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:28:38 Heat of formation + Delta-G solvation = 12.916302 kcal Electronic energy + Delta-G solvation = -27198.092242 eV Core-core repulsion = 23414.076793 eV Total energy + Delta-G solvation = -3784.015449 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.173 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -44.01609 -41.99239 -39.96947 -37.91591 -37.44736 -35.66700 -33.69007 -32.32646 -31.69054 -30.51445 -28.15761 -27.82339 -26.54680 -25.92556 -23.81826 -23.32510 -22.72073 -21.51345 -20.53695 -20.21069 -18.86777 -18.22631 -18.20509 -17.72545 -17.26568 -16.78526 -16.51079 -16.38199 -15.96720 -15.73633 -15.66256 -15.25770 -14.93672 -14.81133 -14.50753 -14.39305 -14.08863 -13.75355 -13.72408 -13.31788 -13.09132 -13.04317 -12.81922 -12.39633 -12.25967 -12.21703 -12.07836 -12.05540 -11.66136 -11.54117 -11.36000 -11.22149 -11.10579 -10.90216 -10.78793 -10.73214 -10.42841 -9.77253 -5.13203 0.91244 1.08143 1.42456 1.47636 1.82237 1.89778 2.45132 2.53036 3.07707 3.21001 3.35526 3.44198 3.53965 3.73244 3.76042 3.79802 3.90881 3.99420 4.08985 4.12845 4.14454 4.19938 4.23358 4.29355 4.42902 4.44471 4.45522 4.51921 4.57555 4.60064 4.63347 4.68745 4.75803 4.83817 4.89316 4.94086 4.98392 5.06751 5.18566 5.18867 5.25151 5.35254 5.45833 5.51231 5.57054 5.84502 6.26345 6.68648 7.89614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.103 4.103 3 Si 0.665 3.335 4 C -0.133 4.133 5 C 0.146 3.854 6 N -0.272 5.272 7 C -0.049 4.049 8 C -0.012 4.012 9 C 0.001 3.999 10 H 0.086 0.914 11 C -0.108 4.108 12 C -0.109 4.109 13 C -0.088 4.088 14 H 0.077 0.923 15 C 0.078 3.922 16 O -0.574 6.574 17 C -0.113 4.113 18 C -0.106 4.106 19 N -0.271 5.271 20 N -0.057 5.057 21 C 0.042 3.958 22 O -0.370 6.370 23 C 0.057 3.943 24 H 0.376 0.624 25 H 0.069 0.931 26 H -0.260 1.260 27 H -0.247 1.247 28 H 0.111 0.889 29 H 0.108 0.892 30 H 0.179 0.821 31 H 0.064 0.936 32 H 0.063 0.937 33 H 0.071 0.929 34 H 0.061 0.939 35 H 0.045 0.955 36 H 0.046 0.954 37 H 0.380 0.620 38 H 0.066 0.934 39 H 0.067 0.933 40 H 0.063 0.937 41 H 0.067 0.933 42 H 0.092 0.908 43 H 0.107 0.893 44 H 0.107 0.893 45 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.744 -2.490 -4.460 6.334 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.214 4.214 3 Si 0.566 3.434 4 C -0.134 4.134 5 C 0.024 3.976 6 N -0.065 5.065 7 C -0.199 4.199 8 C -0.150 4.150 9 C -0.020 4.020 10 H 0.104 0.896 11 C -0.146 4.146 12 C -0.147 4.147 13 C -0.106 4.106 14 H 0.096 0.904 15 C 0.000 4.000 16 O -0.380 6.380 17 C -0.151 4.151 18 C -0.144 4.144 19 N -0.137 5.137 20 N -0.036 5.036 21 C -0.034 4.034 22 O -0.289 6.289 23 C -0.020 4.020 24 H 0.224 0.776 25 H 0.087 0.913 26 H -0.185 1.185 27 H -0.172 1.172 28 H 0.129 0.871 29 H 0.126 0.874 30 H 0.196 0.804 31 H 0.083 0.917 32 H 0.081 0.919 33 H 0.090 0.910 34 H 0.080 0.920 35 H 0.063 0.937 36 H 0.064 0.936 37 H 0.226 0.774 38 H 0.085 0.915 39 H 0.085 0.915 40 H 0.082 0.918 41 H 0.086 0.914 42 H 0.110 0.890 43 H 0.125 0.875 44 H 0.125 0.875 45 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 4.106 -0.740 -2.240 4.735 hybrid contribution -1.425 -1.068 -1.912 2.613 sum 2.681 -1.808 -4.152 5.263 Atomic orbital electron populations 1.86707 1.16890 1.79664 1.49513 1.25990 0.85540 1.10600 0.99238 0.95630 0.91658 0.75284 0.80794 1.23907 0.97457 0.95602 0.96420 1.21722 0.74735 0.95879 1.05297 1.46896 1.08204 1.28655 1.22727 1.23107 0.93480 1.03791 0.99548 1.21765 0.93675 1.00470 0.99045 1.19428 0.94092 0.96039 0.92407 0.89582 1.21578 0.98397 1.00942 0.93721 1.21515 0.98246 0.95426 0.99509 1.21173 0.98098 0.97390 0.93941 0.90430 1.22256 0.96300 0.98421 0.83026 1.86465 1.42420 1.85556 1.23511 1.21528 0.98469 1.01213 0.93866 1.21525 0.98306 0.95243 0.99315 1.75050 1.14030 1.13611 1.11051 1.78153 0.92119 1.15292 1.18071 1.24365 0.85711 0.99760 0.93545 1.89809 1.27944 1.87613 1.23518 1.24008 0.92450 1.02603 0.82913 0.77632 0.91262 1.18485 1.17180 0.87121 0.87402 0.80399 0.91750 0.91872 0.91006 0.91982 0.93682 0.93615 0.77353 0.91523 0.91469 0.91821 0.91386 0.88988 0.87472 0.87477 0.88290 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.33 9.36 -35.23 -0.33 -0.66 16 2 C -0.10 0.21 2.42 37.16 0.09 0.30 16 3 Si 0.67 -1.09 28.41 -169.99 -4.83 -5.92 16 4 C -0.13 0.25 0.81 -153.42 -0.12 0.12 16 5 C 0.15 -0.30 5.87 -4.04 -0.02 -0.32 16 6 N -0.27 -0.31 2.09 -61.26 -0.13 -0.44 16 7 C -0.05 -0.03 10.49 -17.04 -0.18 -0.20 16 8 C -0.01 -0.03 6.16 -82.77 -0.51 -0.54 16 9 C 0.00 0.00 2.65 -91.77 -0.24 -0.24 16 10 H 0.09 0.15 8.14 -51.93 -0.42 -0.27 16 11 C -0.11 0.06 4.80 -26.73 -0.13 -0.07 16 12 C -0.11 0.02 5.10 -26.73 -0.14 -0.12 16 13 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 14 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 15 C 0.08 -0.04 6.43 37.16 0.24 0.20 16 16 O -0.57 -0.33 13.20 -35.23 -0.46 -0.79 16 17 C -0.11 0.08 5.20 -26.73 -0.14 -0.06 16 18 C -0.11 -0.02 5.18 -26.73 -0.14 -0.15 16 19 N -0.27 -1.51 12.41 33.29 0.41 -1.10 16 20 N -0.06 -0.26 10.54 60.35 0.64 0.37 16 21 C 0.04 0.03 7.68 37.64 0.29 0.32 16 22 O -0.37 -0.24 12.39 -35.23 -0.44 -0.68 16 23 C 0.06 -0.20 7.95 37.64 0.30 0.10 16 24 H 0.38 -0.54 8.74 45.56 0.40 -0.14 16 25 H 0.07 -0.26 7.96 -51.93 -0.41 -0.68 16 26 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 27 H -0.25 -0.47 6.05 56.52 0.34 -0.13 16 28 H 0.11 -0.57 8.07 -51.93 -0.42 -0.99 16 29 H 0.11 -0.22 8.06 -51.93 -0.42 -0.64 16 30 H 0.18 -0.43 7.48 -52.49 -0.39 -0.82 16 31 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.06 -0.07 7.37 -51.93 -0.38 -0.45 16 33 H 0.07 0.06 7.82 -51.93 -0.41 -0.34 16 34 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 36 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.38 -1.30 9.12 45.56 0.42 -0.88 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 39 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 42 H 0.09 0.11 4.96 -51.93 -0.26 -0.15 16 43 H 0.11 0.24 7.59 -51.93 -0.39 -0.16 16 44 H 0.11 -0.63 8.10 -51.93 -0.42 -1.05 16 45 H 0.10 -0.54 5.56 -51.93 -0.29 -0.83 16 LS Contribution 346.97 15.07 5.23 5.23 Total: 0.00 -8.90 346.97 -7.30 -16.20 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -6.46 Total: -11.34 kcal Atomic # 6 Polarization: 0.06 SS G_CDS: -0.93 Total: -0.86 kcal Atomic # 7 Polarization: -2.08 SS G_CDS: 0.92 Total: -1.16 kcal Atomic # 8 Polarization: -0.91 SS G_CDS: -1.23 Total: -2.14 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -4.83 Total: -5.92 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -8.90 -7.30 -16.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_16762298_14775216.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.112 kcal (2) G-P(sol) polarization free energy of solvation -8.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.196 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds