Wall clock time and date at job start Tue Mar 9 2021 13:28:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00907 * 1 3 3 H 1.00893 * 109.47224 * 1 2 4 4 H 1.00898 * 109.46729 * 240.00049 * 1 2 3 5 5 C 1.46901 * 109.46862 * 120.00370 * 1 2 3 6 6 C 1.53002 * 109.47071 * 59.99803 * 5 1 2 7 7 H 1.08997 * 109.47317 * 55.00096 * 6 5 1 8 8 C 1.53004 * 109.46924 * 175.00007 * 6 5 1 9 9 C 1.53002 * 109.46924 * 179.97438 * 8 6 5 10 10 C 1.52992 * 109.47177 * 299.99678 * 9 8 6 11 11 H 1.09002 * 109.47792 * 300.00419 * 10 9 8 12 12 C 1.50706 * 109.47323 * 179.97438 * 10 9 8 13 13 C 1.35348 * 126.75485 * 275.01191 * 12 10 9 14 14 N 1.35306 * 106.17456 * 180.02562 * 13 12 10 15 15 C 1.46504 * 125.86748 * 179.97438 * 14 13 12 16 16 C 1.52999 * 109.47335 * 124.99706 * 15 14 13 17 17 C 1.53004 * 112.99712 * 309.66450 * 16 15 14 18 18 O 1.42892 * 109.47402 * 300.00216 * 17 16 15 19 19 Si 1.86298 * 109.46808 * 179.97438 * 17 16 15 20 20 C 1.54033 * 113.81463 * 81.49224 * 16 15 14 21 21 O 1.44448 * 85.42693 * 91.81145 * 20 16 15 22 22 C 1.44178 * 93.37662 * 24.08344 * 21 20 16 23 23 N 1.28714 * 108.26341 * 0.25626 * 14 13 12 24 24 N 1.28629 * 110.18010 * 359.56097 * 23 14 13 25 25 C 1.53004 * 109.46931 * 60.00326 * 10 9 8 26 26 C 1.52992 * 109.47250 * 299.99629 * 25 10 9 27 27 H 1.08997 * 109.46870 * 299.99884 * 5 1 2 28 28 H 1.08996 * 109.47095 * 180.02562 * 5 1 2 29 29 H 1.08997 * 109.47051 * 59.99926 * 8 6 5 30 30 H 1.09003 * 109.46797 * 300.00368 * 8 6 5 31 31 H 1.09004 * 109.46506 * 179.97438 * 9 8 6 32 32 H 1.09002 * 109.47102 * 60.00520 * 9 8 6 33 33 H 1.08004 * 126.91244 * 0.02562 * 13 12 10 34 34 H 1.08996 * 109.47107 * 4.99495 * 15 14 13 35 35 H 1.08999 * 109.46988 * 244.99442 * 15 14 13 36 36 H 1.09004 * 109.46524 * 60.00422 * 17 16 15 37 37 H 0.96703 * 114.00176 * 299.99929 * 18 17 16 38 38 H 1.48506 * 109.99834 * 58.68815 * 19 17 16 39 39 H 1.48502 * 110.00011 * 180.02562 * 19 17 16 40 40 H 1.09009 * 113.86060 * 205.91370 * 20 16 15 41 41 H 1.08999 * 113.86871 * 337.61773 * 20 16 15 42 42 H 1.08999 * 113.86448 * 221.76557 * 22 21 20 43 43 H 1.09009 * 113.97986 * 90.08186 * 22 21 20 44 44 H 1.08997 * 109.47051 * 59.99903 * 25 10 9 45 45 H 1.09003 * 109.47315 * 179.97438 * 25 10 9 46 46 H 1.08997 * 109.47317 * 300.00111 * 26 25 10 47 47 H 1.08999 * 109.47477 * 179.97438 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0091 0.0000 0.0000 3 1 -0.3363 0.9512 0.0000 4 1 -0.3363 -0.4756 0.8239 5 6 -0.4896 -0.6926 -1.1994 6 6 0.0205 -2.1351 -1.1993 7 1 -0.2679 -2.6224 -0.2680 8 6 -0.5896 -2.8918 -2.3810 9 6 -0.0790 -4.3341 -2.3812 10 6 1.4457 -4.3353 -2.5073 11 1 1.7338 -3.8477 -3.4387 12 6 1.9488 -5.7560 -2.5070 13 6 2.2191 -6.5191 -1.4224 14 7 2.6424 -7.7131 -1.8977 15 6 3.0507 -8.8636 -1.0877 16 6 2.2319 -10.0902 -1.4947 17 6 0.7261 -9.8205 -1.5252 18 8 0.2879 -9.4177 -0.2262 19 14 -0.1725 -11.3721 -2.0311 20 6 2.7620 -10.8022 -2.7535 21 8 3.5262 -11.6116 -1.8330 22 6 2.6184 -11.3750 -0.7381 23 7 2.6305 -7.6625 -3.1838 24 7 2.2162 -6.5106 -3.5787 25 6 2.0558 -3.5786 -1.3257 26 6 1.5453 -2.1364 -1.3254 27 1 -0.1263 -0.1788 -2.0894 28 1 -1.5796 -0.6922 -1.1997 29 1 -0.3012 -2.4045 -3.3123 30 1 -1.6759 -2.8904 -2.2914 31 1 -0.5140 -4.8733 -3.2228 32 1 -0.3670 -4.8217 -1.4499 33 1 2.1175 -6.2327 -0.3860 34 1 2.8787 -8.6452 -0.0337 35 1 4.1099 -9.0640 -1.2490 36 1 0.5136 -9.0278 -2.2425 37 1 0.4458 -10.0764 0.4640 38 1 0.1344 -12.4700 -1.0792 39 1 -1.6361 -11.1232 -2.0652 40 1 1.9995 -11.3570 -3.3004 41 1 3.3722 -10.1669 -3.3955 42 1 3.1150 -11.1932 0.2150 43 1 1.8114 -12.1043 -0.6662 44 1 1.7678 -4.0662 -0.3943 45 1 3.1421 -3.5798 -1.4152 46 1 1.8333 -1.6488 -2.2567 47 1 1.9795 -1.5974 -0.4833 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_16762298_17850172.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:28:54 Heat of formation + Delta-G solvation = 168.937433 kcal Electronic energy + Delta-G solvation = -27260.580548 eV Core-core repulsion = 23567.393606 eV Total energy + Delta-G solvation = -3693.186942 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.192 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -45.22820 -43.03115 -42.81238 -40.30400 -38.79964 -36.79327 -35.23860 -33.44718 -33.06301 -32.00402 -29.21311 -28.82199 -28.46979 -26.81303 -25.60619 -25.11842 -24.06261 -23.34948 -22.38169 -21.64670 -21.29167 -21.21950 -19.80776 -19.48086 -19.02768 -18.61001 -18.18115 -17.92476 -17.60754 -17.44672 -17.11585 -16.96496 -16.75174 -16.37338 -16.27389 -15.80717 -15.71975 -15.27002 -15.19712 -14.87151 -14.70461 -14.62758 -14.59434 -14.18883 -13.93568 -13.75590 -13.67574 -13.16644 -13.08715 -12.91060 -12.90880 -12.79260 -12.50882 -12.28098 -11.99072 -11.46398 -11.42108 -11.02649 -5.75008 -1.17055 -0.25841 0.34805 0.40567 0.66660 0.71173 0.72700 0.84730 0.89850 1.12958 1.53176 1.58509 1.67515 1.77646 1.83867 2.04504 2.07475 2.20552 2.33481 2.39781 2.43206 2.52612 2.65911 2.66709 2.73011 2.81077 2.87234 2.91072 2.94583 3.17201 3.20944 3.24131 3.32518 3.34549 3.35562 3.37523 3.49682 3.58947 3.62070 3.67302 3.69687 3.80000 3.88647 4.02269 4.05444 4.13251 4.19038 4.26859 4.68954 5.37602 6.70375 Molecular weight = 310.19amu Principal moments of inertia in cm(-1) A = 0.023493 B = 0.003514 C = 0.003363 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1191.541586 B = 7966.336478 C = 8322.809563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.639 5.639 2 H 0.433 0.567 3 H 0.439 0.561 4 H 0.435 0.565 5 C -0.007 4.007 6 C -0.117 4.117 7 H 0.096 0.904 8 C -0.111 4.111 9 C -0.112 4.112 10 C 0.002 3.998 11 H 0.093 0.907 12 C -0.025 4.025 13 C -0.035 4.035 14 N -0.281 5.281 15 C 0.147 3.853 16 C -0.176 4.176 17 C -0.102 4.102 18 O -0.531 6.531 19 Si 0.671 3.329 20 C 0.054 3.946 21 O -0.363 6.363 22 C 0.034 3.966 23 N -0.077 5.077 24 N -0.261 5.261 25 C -0.113 4.113 26 C -0.129 4.129 27 H 0.135 0.865 28 H 0.136 0.864 29 H 0.078 0.922 30 H 0.078 0.922 31 H 0.079 0.921 32 H 0.069 0.931 33 H 0.184 0.816 34 H 0.114 0.886 35 H 0.113 0.887 36 H 0.110 0.890 37 H 0.376 0.624 38 H -0.246 1.246 39 H -0.251 1.251 40 H 0.098 0.902 41 H 0.114 0.886 42 H 0.101 0.899 43 H 0.098 0.902 44 H 0.070 0.930 45 H 0.077 0.923 46 H 0.083 0.917 47 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.535 30.411 10.605 32.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.036 5.036 2 H 0.263 0.737 3 H 0.267 0.733 4 H 0.263 0.737 5 C -0.130 4.130 6 C -0.136 4.136 7 H 0.114 0.886 8 C -0.149 4.149 9 C -0.150 4.150 10 C -0.019 4.019 11 H 0.111 0.889 12 C -0.164 4.164 13 C -0.187 4.187 14 N -0.073 5.073 15 C 0.026 3.974 16 C -0.177 4.177 17 C -0.213 4.213 18 O -0.338 6.338 19 Si 0.571 3.429 20 C -0.022 4.022 21 O -0.282 6.282 22 C -0.043 4.043 23 N -0.056 5.056 24 N -0.127 5.127 25 C -0.151 4.151 26 C -0.166 4.166 27 H 0.154 0.846 28 H 0.154 0.846 29 H 0.097 0.903 30 H 0.096 0.904 31 H 0.097 0.903 32 H 0.087 0.913 33 H 0.201 0.799 34 H 0.132 0.868 35 H 0.131 0.869 36 H 0.128 0.872 37 H 0.223 0.777 38 H -0.171 1.171 39 H -0.175 1.175 40 H 0.116 0.884 41 H 0.132 0.868 42 H 0.120 0.880 43 H 0.115 0.885 44 H 0.089 0.911 45 H 0.096 0.904 46 H 0.101 0.899 47 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -6.853 29.241 8.936 31.334 hybrid contribution -0.029 0.806 2.667 2.786 sum -6.882 30.047 11.603 32.936 Atomic orbital electron populations 1.42452 1.21425 1.20707 1.19060 0.73745 0.73304 0.73685 1.23976 1.05197 0.96751 0.87106 1.21826 0.97196 0.91388 1.03214 0.88568 1.21525 1.00725 0.96045 0.96653 1.21573 0.94168 0.95511 1.03712 1.19386 0.94496 0.88101 0.99879 0.88910 1.21723 1.07068 0.98413 0.89149 1.23250 1.07186 0.86633 1.01606 1.47260 1.42083 1.11648 1.06346 1.21797 1.00189 0.80876 0.94504 1.24608 0.97098 0.96037 0.99956 1.26181 0.94839 1.11910 0.88340 1.86561 1.84376 1.45705 1.17112 0.94659 0.81205 0.75714 0.91278 1.24144 0.94836 0.91082 0.92106 1.89856 1.42789 1.73652 1.21868 1.24321 0.94068 0.92633 0.93298 1.78345 1.18805 1.16183 0.92240 1.75134 1.13817 0.97827 1.25893 1.21560 1.01462 0.93514 0.98577 1.21812 0.92823 0.99198 1.02772 0.84643 0.84619 0.90307 0.90384 0.90276 0.91273 0.79928 0.86759 0.86944 0.87240 0.77666 1.17077 1.17501 0.88416 0.86783 0.88035 0.88466 0.91135 0.90411 0.89855 0.92072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.38 4.48 -10.37 -0.05 24.33 16 2 H 0.43 -16.69 7.26 -39.29 -0.29 -16.98 16 3 H 0.44 -17.52 9.02 -39.30 -0.35 -17.87 16 4 H 0.44 -17.09 8.96 -39.29 -0.35 -17.45 16 5 C -0.01 0.23 6.01 -3.82 -0.02 0.20 16 6 C -0.12 3.23 2.35 -90.61 -0.21 3.01 16 7 H 0.10 -2.69 8.14 -51.93 -0.42 -3.12 16 8 C -0.11 2.47 5.20 -26.73 -0.14 2.33 16 9 C -0.11 1.94 5.19 -26.73 -0.14 1.81 16 10 C 0.00 -0.03 2.65 -91.77 -0.24 -0.27 16 11 H 0.09 -1.39 8.14 -51.93 -0.42 -1.81 16 12 C -0.03 0.29 6.16 -82.78 -0.51 -0.22 16 13 C -0.04 0.43 10.75 -17.05 -0.18 0.25 16 14 N -0.28 2.89 2.61 -61.26 -0.16 2.73 16 15 C 0.15 -1.76 5.64 -4.04 -0.02 -1.78 16 16 C -0.18 1.94 0.70 -153.43 -0.11 1.83 16 17 C -0.10 1.06 2.20 37.16 0.08 1.14 16 18 O -0.53 5.61 12.66 -35.23 -0.45 5.16 16 19 Si 0.67 -6.21 28.46 -169.99 -4.84 -11.05 16 20 C 0.05 -0.52 7.69 37.64 0.29 -0.23 16 21 O -0.36 2.71 12.39 -35.23 -0.44 2.27 16 22 C 0.03 -0.36 7.67 37.64 0.29 -0.07 16 23 N -0.08 0.55 12.03 60.35 0.73 1.28 16 24 N -0.26 1.85 12.41 33.29 0.41 2.26 16 25 C -0.11 2.25 4.80 -26.73 -0.13 2.12 16 26 C -0.13 3.26 4.95 -26.73 -0.13 3.13 16 27 H 0.14 -4.41 8.14 -51.93 -0.42 -4.83 16 28 H 0.14 -4.45 8.14 -51.93 -0.42 -4.88 16 29 H 0.08 -1.69 8.14 -51.93 -0.42 -2.12 16 30 H 0.08 -1.71 8.14 -51.93 -0.42 -2.14 16 31 H 0.08 -1.13 8.14 -51.93 -0.42 -1.55 16 32 H 0.07 -1.18 8.14 -51.93 -0.42 -1.60 16 33 H 0.18 -2.86 7.48 -52.48 -0.39 -3.25 16 34 H 0.11 -1.63 8.07 -51.93 -0.42 -2.05 16 35 H 0.11 -1.32 8.06 -51.93 -0.42 -1.74 16 36 H 0.11 -0.97 7.29 -51.93 -0.38 -1.35 16 37 H 0.38 -5.03 8.44 45.56 0.38 -4.65 16 38 H -0.25 1.96 6.00 56.52 0.34 2.30 16 39 H -0.25 1.39 7.11 56.52 0.40 1.79 16 40 H 0.10 -1.07 5.55 -51.92 -0.29 -1.35 16 41 H 0.11 -1.03 7.59 -51.93 -0.39 -1.42 16 42 H 0.10 -1.26 8.10 -51.93 -0.42 -1.68 16 43 H 0.10 -1.02 4.93 -51.92 -0.26 -1.28 16 44 H 0.07 -1.43 7.37 -51.93 -0.38 -1.81 16 45 H 0.08 -1.38 8.14 -51.93 -0.42 -1.81 16 46 H 0.08 -2.03 8.14 -51.93 -0.42 -2.45 16 47 H 0.06 -1.74 6.74 -51.93 -0.35 -2.09 16 LS Contribution 356.39 15.07 5.37 5.37 Total: 1.00 -43.20 356.39 -8.39 -51.59 By element: Atomic # 1 Polarization: -89.39 SS G_CDS: -7.80 Total: -97.19 kcal Atomic # 6 Polarization: 14.42 SS G_CDS: -1.18 Total: 13.24 kcal Atomic # 7 Polarization: 29.67 SS G_CDS: 0.93 Total: 30.60 kcal Atomic # 8 Polarization: 8.32 SS G_CDS: -0.88 Total: 7.43 kcal Atomic # 14 Polarization: -6.21 SS G_CDS: -4.84 Total: -11.05 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -43.20 -8.39 -51.59 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_16762298_17850172.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 220.528 kcal (2) G-P(sol) polarization free energy of solvation -43.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 177.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.393 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.591 kcal (6) G-S(sol) free energy of system = (1) + (5) 168.937 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds