Wall clock time and date at job start Tue Mar 9 2021 13:35:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42907 * 114.00025 * 2 1 4 4 C 1.52995 * 112.84833 * 66.01439 * 3 2 1 5 5 F 1.39897 * 109.47588 * 283.56405 * 4 3 2 6 6 F 1.39906 * 109.47211 * 43.56923 * 4 3 2 7 7 F 1.39903 * 109.47284 * 163.56324 * 4 3 2 8 8 C 1.53778 * 113.61249 * 294.81768 * 3 2 1 9 9 C 1.53785 * 87.08270 * 270.79830 * 8 3 2 10 10 H 1.08990 * 113.61335 * 219.93236 * 9 8 3 11 11 C 1.53008 * 113.60969 * 89.11682 * 9 8 3 12 12 N 1.46492 * 109.46729 * 175.00070 * 11 9 8 13 13 C 1.35215 * 125.75140 * 124.99976 * 12 11 9 14 14 C 1.36490 * 106.04662 * 179.97438 * 13 12 11 15 15 C 1.48444 * 126.90883 * 179.97438 * 14 13 12 16 16 C 1.39294 * 120.12012 * 184.72260 * 15 14 13 17 17 C 1.38046 * 119.87498 * 179.79211 * 16 15 14 18 18 C 1.50703 * 119.93553 * 180.21005 * 17 16 15 19 19 O 1.42909 * 109.47095 * 65.27581 * 18 17 16 20 20 Si 1.86301 * 109.46903 * 185.27594 * 18 17 16 21 21 C 1.38292 * 120.12091 * 0.48191 * 17 16 15 22 22 C 1.38337 * 120.24213 * 359.75105 * 21 17 16 23 23 C 1.38002 * 120.11764 * 0.02562 * 22 21 17 24 24 N 1.34509 * 106.18863 * 0.24315 * 14 13 12 25 25 N 1.28613 * 108.78222 * 359.59378 * 24 14 13 26 26 C 1.53780 * 87.08115 * 334.57096 * 9 8 3 27 27 H 1.09000 * 109.47255 * 302.48696 * 1 2 3 28 28 H 1.09009 * 109.47102 * 62.48524 * 1 2 3 29 29 H 1.08999 * 109.47309 * 182.48146 * 1 2 3 30 30 H 1.09003 * 113.61170 * 156.24966 * 8 3 2 31 31 H 1.09001 * 113.69507 * 25.36038 * 8 3 2 32 32 H 1.09002 * 109.46899 * 54.99997 * 11 9 8 33 33 H 1.08996 * 109.47145 * 295.00091 * 11 9 8 34 34 H 1.08000 * 126.97799 * 359.96097 * 13 12 11 35 35 H 1.07999 * 120.05619 * 0.02562 * 16 15 14 36 36 H 1.08994 * 109.47159 * 305.27713 * 18 17 16 37 37 H 0.96694 * 113.99552 * 59.99752 * 19 18 17 38 38 H 1.48497 * 110.00071 * 179.97438 * 20 18 17 39 39 H 1.48500 * 109.99863 * 301.31954 * 20 18 17 40 40 H 1.08004 * 119.87784 * 179.76660 * 21 17 16 41 41 H 1.07993 * 119.94632 * 179.97438 * 22 21 17 42 42 H 1.07997 * 120.06403 * 179.97438 * 23 22 21 43 43 H 1.08996 * 113.61770 * 139.97812 * 26 9 8 44 44 H 1.09005 * 113.61107 * 270.88331 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7283 2.0813 1.2882 5 9 0.4116 2.5538 1.2694 6 9 1.9051 1.2368 2.3894 7 9 2.6104 3.1630 1.3837 8 6 1.7205 2.1088 -1.2789 9 6 2.9973 1.4845 -1.8662 10 1 3.5925 2.1813 -2.4562 11 6 2.7554 0.1546 -2.5832 12 7 4.0015 -0.2975 -3.2068 13 6 4.5935 -1.4971 -3.0098 14 6 5.7197 -1.4931 -3.7809 15 6 6.7147 -2.5870 -3.9114 16 6 7.8695 -2.3952 -4.6663 17 6 8.7935 -3.4144 -4.7807 18 6 10.0456 -3.2067 -5.5932 19 8 10.8541 -2.2039 -4.9744 20 14 10.9992 -4.8046 -5.6837 21 6 8.5694 -4.6276 -4.1558 22 6 7.4219 -4.8251 -3.4088 23 6 6.4938 -3.8114 -3.2840 24 7 5.7500 -0.2964 -4.3943 25 7 4.7167 0.3796 -4.0346 26 6 3.4899 1.3230 -0.4184 27 1 -0.3634 0.5520 0.8668 28 1 -0.3634 0.4748 -0.9115 29 1 -0.3634 -1.0267 0.0445 30 1 1.7858 3.1880 -1.1408 31 1 0.8088 1.8021 -1.7917 32 1 1.9929 0.2890 -3.3505 33 1 2.4184 -0.5906 -1.8627 34 1 4.2460 -2.2961 -2.3718 35 1 8.0434 -1.4495 -5.1580 36 1 9.7767 -2.8866 -6.5997 37 1 11.1310 -2.4223 -4.0741 38 1 12.2361 -4.6133 -6.4829 39 1 11.3443 -5.2683 -4.3159 40 1 9.2931 -5.4236 -4.2510 41 1 7.2516 -5.7745 -2.9232 42 1 5.5981 -3.9667 -2.7010 43 1 4.0066 0.3809 -0.2354 44 1 4.0390 2.1875 -0.0451 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_274090_17321614_14928536.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:35:14 Heat of formation + Delta-G solvation = -60.540423 kcal Electronic energy + Delta-G solvation = -33599.015861 eV Core-core repulsion = 28492.994552 eV Total energy + Delta-G solvation = -5106.021309 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.129 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.29131 -48.83614 -48.72133 -44.25833 -41.70263 -40.46130 -37.80061 -37.61869 -35.48155 -33.70829 -32.29700 -30.99855 -30.23642 -28.53389 -27.80944 -27.09805 -26.74750 -24.89656 -24.02502 -23.42538 -22.15851 -21.64164 -20.65748 -19.95352 -19.58593 -19.40700 -18.76682 -18.15859 -17.58548 -17.46021 -17.26274 -16.73493 -16.65332 -16.19861 -16.08820 -15.86707 -15.74575 -15.64488 -15.60964 -15.38566 -15.17667 -14.95717 -14.90907 -14.84858 -14.79154 -14.60436 -14.33889 -14.00896 -13.72749 -13.56386 -13.30670 -13.20137 -12.96421 -12.83737 -12.64928 -12.45518 -12.33128 -12.04375 -11.94728 -11.82843 -11.52701 -11.34862 -11.06518 -10.81303 -10.53894 -9.83391 -9.26571 -4.92703 -0.08530 0.37465 0.67292 1.18232 1.32353 1.41106 1.62152 1.69565 1.78626 1.99878 2.35683 2.47470 2.65033 2.85543 2.89647 3.05620 3.16916 3.24083 3.37797 3.41653 3.59291 3.68926 3.74945 3.87826 3.91655 3.92393 4.03228 4.07922 4.10437 4.13321 4.15017 4.24575 4.27506 4.33718 4.41579 4.46870 4.53734 4.56730 4.66365 4.74707 4.83043 5.00276 5.09834 5.40099 5.42955 5.47569 5.53385 5.57087 5.94175 6.46838 7.49773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.336 6.336 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.180 7.180 6 F -0.173 7.173 7 F -0.174 7.174 8 C -0.140 4.140 9 C -0.118 4.118 10 H 0.114 0.886 11 C 0.127 3.873 12 N -0.285 5.285 13 C -0.032 4.032 14 C 0.017 3.983 15 C -0.006 4.006 16 C -0.064 4.064 17 C -0.117 4.117 18 C -0.076 4.076 19 O -0.528 6.528 20 Si 0.688 3.312 21 C -0.114 4.114 22 C -0.112 4.112 23 C -0.100 4.100 24 N -0.253 5.253 25 N -0.077 5.077 26 C -0.113 4.113 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.104 0.896 30 H 0.115 0.885 31 H 0.098 0.902 32 H 0.107 0.893 33 H 0.124 0.876 34 H 0.193 0.807 35 H 0.135 0.865 36 H 0.119 0.881 37 H 0.375 0.625 38 H -0.258 1.258 39 H -0.260 1.260 40 H 0.128 0.872 41 H 0.131 0.869 42 H 0.126 0.874 43 H 0.095 0.905 44 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.328 -4.238 1.069 6.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.254 6.254 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.162 7.162 6 F -0.155 7.155 7 F -0.155 7.155 8 C -0.178 4.178 9 C -0.137 4.137 10 H 0.132 0.868 11 C 0.006 3.994 12 N -0.078 5.078 13 C -0.183 4.183 14 C -0.119 4.119 15 C -0.008 4.008 16 C -0.083 4.083 17 C -0.117 4.117 18 C -0.185 4.185 19 O -0.334 6.334 20 Si 0.589 3.411 21 C -0.132 4.132 22 C -0.130 4.130 23 C -0.119 4.119 24 N -0.120 5.120 25 N -0.057 5.057 26 C -0.150 4.150 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.122 0.878 30 H 0.133 0.867 31 H 0.116 0.884 32 H 0.125 0.875 33 H 0.142 0.858 34 H 0.210 0.790 35 H 0.153 0.847 36 H 0.137 0.863 37 H 0.223 0.777 38 H -0.183 1.183 39 H -0.185 1.185 40 H 0.146 0.854 41 H 0.149 0.851 42 H 0.144 0.856 43 H 0.114 0.886 44 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -4.492 -3.128 -0.044 5.474 hybrid contribution -0.478 0.121 2.044 2.103 sum -4.970 -3.007 2.001 6.144 Atomic orbital electron populations 1.23191 0.79122 1.04616 1.01813 1.88035 1.21456 1.21964 1.93910 1.24031 0.99688 0.86366 0.90209 1.21107 0.74374 0.78747 0.87453 1.93193 1.36832 1.89318 1.96821 1.93229 1.94933 1.70600 1.56702 1.93193 1.68821 1.56948 1.96554 1.23586 0.99297 1.01467 0.93408 1.22487 0.98444 0.96689 0.96068 0.86765 1.22156 0.81495 0.97647 0.98091 1.47236 1.19488 1.11182 1.29855 1.23555 0.96748 0.91802 1.06239 1.20365 0.96406 0.94775 1.00398 1.17671 0.92989 0.91021 0.99114 1.21080 0.91606 0.99131 0.96484 1.20220 0.97224 0.94335 0.99910 1.25060 0.92004 1.02843 0.98632 1.86626 1.69884 1.43655 1.33204 0.94988 0.82765 0.80144 0.83194 1.21149 0.98099 0.96468 0.97435 1.20998 0.93766 0.99179 0.99011 1.21119 0.99559 0.92110 0.99116 1.75336 1.12952 1.03212 1.20484 1.78248 1.00459 1.20324 1.06648 1.23287 0.91155 1.05808 0.94743 0.92527 0.92494 0.87785 0.86693 0.88351 0.87513 0.85772 0.78983 0.84724 0.86324 0.77725 1.18278 1.18538 0.85428 0.85084 0.85601 0.88619 0.86238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 10.43 101.05 1.05 1.02 16 2 O -0.34 0.81 8.36 -35.23 -0.29 0.51 16 3 C 0.04 -0.09 0.85 -89.81 -0.08 -0.17 16 4 C 0.44 -0.08 2.51 37.16 0.09 0.02 16 5 F -0.18 -0.03 15.24 2.25 0.03 0.01 16 6 F -0.17 -0.28 17.09 2.25 0.04 -0.24 16 7 F -0.17 -0.07 15.82 2.25 0.04 -0.03 16 8 C -0.14 0.56 6.52 -25.92 -0.17 0.39 16 9 C -0.12 0.38 4.02 -89.80 -0.36 0.02 16 10 H 0.11 -0.25 7.90 -51.93 -0.41 -0.66 16 11 C 0.13 -0.42 6.03 -4.04 -0.02 -0.45 16 12 N -0.29 0.00 3.43 -60.99 -0.21 -0.21 16 13 C -0.03 0.01 10.96 -16.69 -0.18 -0.17 16 14 C 0.02 0.04 6.98 -83.12 -0.58 -0.54 16 15 C -0.01 -0.01 5.88 -104.89 -0.62 -0.63 16 16 C -0.06 -0.15 9.35 -39.26 -0.37 -0.52 16 17 C -0.12 -0.10 5.34 -104.67 -0.56 -0.66 16 18 C -0.08 -0.04 2.80 36.01 0.10 0.06 16 19 O -0.53 -1.16 12.84 -35.23 -0.45 -1.62 16 20 Si 0.69 -0.47 29.88 -169.99 -5.08 -5.55 16 21 C -0.11 0.05 8.66 -39.53 -0.34 -0.29 16 22 C -0.11 0.12 10.03 -39.63 -0.40 -0.28 16 23 C -0.10 0.06 9.58 -39.26 -0.38 -0.32 16 24 N -0.25 -1.24 12.17 33.06 0.40 -0.84 16 25 N -0.08 -0.27 12.73 60.35 0.77 0.50 16 26 C -0.11 0.29 6.89 -25.92 -0.18 0.11 16 27 H 0.06 -0.15 6.25 -51.93 -0.32 -0.47 16 28 H 0.06 -0.30 6.76 -51.92 -0.35 -0.65 16 29 H 0.10 -0.52 8.14 -51.93 -0.42 -0.95 16 30 H 0.11 -0.49 8.06 -51.93 -0.42 -0.91 16 31 H 0.10 -0.52 6.70 -51.93 -0.35 -0.87 16 32 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 33 H 0.12 -0.56 6.05 -51.93 -0.31 -0.88 16 34 H 0.19 -0.79 7.43 -52.49 -0.39 -1.18 16 35 H 0.13 0.48 7.91 -52.49 -0.41 0.07 16 36 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 16 37 H 0.38 -0.28 8.70 45.56 0.40 0.12 16 38 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 39 H -0.26 -0.25 7.00 56.52 0.40 0.14 16 40 H 0.13 -0.27 4.82 -52.48 -0.25 -0.52 16 41 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 42 H 0.13 -0.39 7.14 -52.49 -0.37 -0.76 16 43 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 44 H 0.12 -0.32 7.01 -51.93 -0.36 -0.68 16 LS Contribution 373.64 15.07 5.63 5.63 Total: 0.00 -8.55 373.64 -6.98 -15.53 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -4.87 Total: -11.31 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -2.98 Total: -2.39 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: 0.96 Total: -0.55 kcal Atomic # 8 Polarization: -0.36 SS G_CDS: -0.75 Total: -1.10 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.11 Total: -0.26 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.08 Total: -5.55 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.55 -6.98 -15.53 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_274090_17321614_14928536.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.007 kcal (2) G-P(sol) polarization free energy of solvation -8.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.559 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds