Wall clock time and date at job start Tue Mar 9 2021 13:37:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33332 * 125.94954 * 2 1 4 4 C 1.50699 * 122.71213 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.46763 * 330.00371 * 4 3 2 6 6 Si 1.86301 * 109.47112 * 210.00203 * 4 3 2 7 7 N 1.32115 * 114.57580 * 180.02562 * 3 2 1 8 8 C 1.29688 * 116.87094 * 359.97438 * 7 3 2 9 9 N 1.38609 * 124.95101 * 179.97438 * 8 7 3 10 10 C 1.46501 * 119.99947 * 179.97438 * 9 8 7 11 11 H 1.08996 * 109.47594 * 325.00623 * 10 9 8 12 12 C 1.53002 * 109.47151 * 85.00454 * 10 9 8 13 13 C 1.53008 * 109.46881 * 59.99828 * 12 10 9 14 14 C 1.53002 * 109.46714 * 60.00177 * 13 12 10 15 15 H 1.09000 * 109.47154 * 60.00522 * 14 13 12 16 16 C 1.52998 * 109.46625 * 179.97438 * 14 13 12 17 17 O 1.42903 * 109.47533 * 294.99970 * 16 14 13 18 18 C 1.52997 * 109.47562 * 299.99794 * 14 13 12 19 19 C 1.52995 * 109.47384 * 205.00523 * 10 9 8 20 20 S 1.70966 * 110.09929 * 359.73162 * 8 7 3 21 21 H 1.09002 * 109.47152 * 90.00172 * 1 2 3 22 22 H 1.09001 * 109.46980 * 330.00272 * 1 2 3 23 23 H 1.09004 * 109.47113 * 210.00253 * 1 2 3 24 24 H 1.08995 * 109.47264 * 89.99891 * 4 3 2 25 25 H 0.96708 * 113.99587 * 180.02562 * 5 4 3 26 26 H 1.48501 * 109.99858 * 298.68363 * 6 4 3 27 27 H 1.48500 * 109.99690 * 59.99835 * 6 4 3 28 28 H 0.96999 * 120.00058 * 0.02562 * 9 8 7 29 29 H 1.08990 * 109.47732 * 179.97438 * 12 10 9 30 30 H 1.08999 * 109.46955 * 300.00234 * 12 10 9 31 31 H 1.09000 * 109.47032 * 300.00000 * 13 12 10 32 32 H 1.08995 * 109.46716 * 179.97438 * 13 12 10 33 33 H 1.08998 * 109.47698 * 55.00065 * 16 14 13 34 34 H 1.09001 * 109.46927 * 175.00238 * 16 14 13 35 35 H 0.96701 * 114.00530 * 180.02562 * 17 16 14 36 36 H 1.09000 * 109.46970 * 300.00659 * 18 14 13 37 37 H 1.08994 * 109.47550 * 180.02562 * 18 14 13 38 38 H 1.09004 * 109.47263 * 59.99785 * 19 10 9 39 39 H 1.09000 * 109.47584 * 180.02562 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7414 2.4831 0.0006 5 8 0.4810 2.5022 -0.6725 6 14 2.9320 3.6152 -0.8779 7 7 3.5850 0.8188 -0.0005 8 6 3.9315 -0.4309 -0.0005 9 7 5.2385 -0.8925 -0.0015 10 6 5.5066 -2.3328 -0.0007 11 1 4.7461 -2.8437 0.5897 12 6 5.4750 -2.8582 -1.4374 13 6 6.5426 -2.1411 -2.2663 14 6 7.9217 -2.4028 -1.6577 15 1 8.1212 -3.4744 -1.6572 16 6 8.9893 -1.6862 -2.4869 17 8 9.0390 -2.2576 -3.7958 18 6 7.9534 -1.8775 -0.2211 19 6 6.8857 -2.5946 0.6078 20 16 2.5413 -1.4260 0.0078 21 1 -0.3633 0.0000 -1.0277 22 1 -0.3633 0.8900 0.5138 23 1 -0.3633 -0.8900 0.5139 24 1 1.6096 2.8212 1.0283 25 1 0.0688 3.3762 -0.7107 26 1 4.2369 3.6285 -0.1692 27 1 3.1202 3.1648 -2.2803 28 1 5.9756 -0.2620 -0.0019 29 1 5.6749 -3.9296 -1.4369 30 1 4.4924 -2.6717 -1.8708 31 1 6.3430 -1.0695 -2.2668 32 1 6.5203 -2.5157 -3.2896 33 1 8.7412 -0.6275 -2.5620 34 1 9.9602 -1.7985 -2.0044 35 1 9.6959 -1.8514 -4.3777 36 1 7.7538 -0.8059 -0.2216 37 1 8.9360 -2.0635 0.2123 38 1 6.9083 -2.2202 1.6313 39 1 7.0854 -3.6661 0.6079 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_7044652_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:05 Heat of formation + Delta-G solvation = -43.895646 kcal Electronic energy + Delta-G solvation = -21104.822741 eV Core-core repulsion = 17947.141709 eV Total energy + Delta-G solvation = -3157.681032 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.119 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.12940 -40.42919 -38.01357 -37.46636 -35.50396 -32.97186 -31.98922 -31.33627 -29.03852 -26.52081 -25.47744 -24.39459 -23.75482 -22.43166 -20.76541 -20.31956 -19.05388 -18.32363 -17.96720 -17.35143 -16.83680 -16.54771 -16.13119 -15.82993 -15.57759 -15.45178 -14.97126 -14.79948 -14.10085 -14.03978 -13.95223 -13.80261 -13.53432 -13.34890 -13.32747 -13.11544 -12.81119 -12.64277 -12.34502 -12.00567 -11.77934 -11.67269 -11.51983 -11.30025 -10.99142 -10.87195 -10.53942 -10.23560 -9.91252 -8.52467 -4.79704 0.12952 0.24923 0.87073 1.42558 1.84758 1.95770 2.01719 2.39811 3.08478 3.15953 3.46483 3.51776 3.70713 3.85969 4.00727 4.07015 4.15963 4.24889 4.25659 4.30992 4.36183 4.44707 4.46877 4.48345 4.51307 4.60977 4.79882 4.82903 4.91580 4.93942 4.96593 5.00214 5.11041 5.20948 5.28344 5.33853 5.42625 5.67428 6.31424 6.61333 6.65631 6.98698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 C -0.229 4.229 3 C 0.100 3.900 4 C -0.035 4.035 5 O -0.544 6.544 6 Si 0.711 3.289 7 N -0.552 5.552 8 C 0.322 3.678 9 N -0.687 5.687 10 C 0.151 3.849 11 H 0.083 0.917 12 C -0.139 4.139 13 C -0.108 4.108 14 C -0.088 4.088 15 H 0.081 0.919 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.116 4.116 19 C -0.122 4.122 20 S 0.100 5.900 21 H 0.072 0.928 22 H 0.087 0.913 23 H 0.056 0.944 24 H 0.080 0.920 25 H 0.385 0.615 26 H -0.253 1.253 27 H -0.264 1.264 28 H 0.410 0.590 29 H 0.080 0.920 30 H 0.068 0.932 31 H 0.060 0.940 32 H 0.073 0.927 33 H 0.044 0.956 34 H 0.046 0.954 35 H 0.381 0.619 36 H 0.062 0.938 37 H 0.073 0.927 38 H 0.076 0.924 39 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.631 1.050 1.529 1.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.352 4.352 3 C -0.029 4.029 4 C -0.147 4.147 5 O -0.350 6.350 6 Si 0.611 3.389 7 N -0.280 5.280 8 C -0.049 4.049 9 N -0.329 5.329 10 C 0.046 3.954 11 H 0.101 0.899 12 C -0.178 4.178 13 C -0.146 4.146 14 C -0.106 4.106 15 H 0.100 0.900 16 C 0.001 3.999 17 O -0.378 6.378 18 C -0.154 4.154 19 C -0.160 4.160 20 S 0.349 5.651 21 H 0.091 0.909 22 H 0.106 0.894 23 H 0.075 0.925 24 H 0.098 0.902 25 H 0.233 0.767 26 H -0.178 1.178 27 H -0.189 1.189 28 H 0.249 0.751 29 H 0.098 0.902 30 H 0.087 0.913 31 H 0.079 0.921 32 H 0.091 0.909 33 H 0.062 0.938 34 H 0.064 0.936 35 H 0.228 0.772 36 H 0.081 0.919 37 H 0.092 0.908 38 H 0.095 0.905 39 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 1.333 -0.784 1.320 2.033 hybrid contribution 0.557 0.839 0.055 1.009 sum 1.890 0.055 1.375 2.338 Atomic orbital electron populations 1.20093 0.86247 1.02396 1.02783 1.25158 1.01512 0.92455 1.16053 1.18921 0.86470 0.95023 1.02459 1.23951 0.93057 0.96319 1.01405 1.86472 1.33762 1.35641 1.79135 0.96238 0.78931 0.84616 0.79123 1.65702 1.17179 1.16888 1.28217 1.23239 0.92017 0.91175 0.98486 1.44142 1.01503 1.07089 1.80140 1.21161 0.98232 0.79008 0.97015 0.89890 1.22077 1.00096 1.00791 0.94797 1.21462 0.92884 1.00651 0.99569 1.21174 0.94748 1.01149 0.93565 0.90040 1.22219 0.97999 0.96129 0.83573 1.86469 1.63388 1.63690 1.24270 1.21525 0.99454 0.99998 0.94396 1.21771 0.92532 1.02273 0.99451 1.83938 0.96483 1.10527 1.74192 0.90944 0.89426 0.92536 0.90229 0.76728 1.17770 1.18912 0.75115 0.90178 0.91321 0.92097 0.90854 0.93769 0.93559 0.77224 0.91899 0.90845 0.90537 0.89471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.11 8.96 36.01 0.32 0.21 16 2 C -0.23 -0.93 6.50 -36.02 -0.23 -1.16 16 3 C 0.10 0.49 5.95 -84.18 -0.50 -0.01 16 4 C -0.04 -0.06 2.82 36.01 0.10 0.04 16 5 O -0.54 -0.15 9.86 -35.23 -0.35 -0.50 16 6 Si 0.71 1.14 32.08 -169.99 -5.45 -4.31 16 7 N -0.55 -3.17 8.95 -11.36 -0.10 -3.27 16 8 C 0.32 1.23 8.22 -87.68 -0.72 0.51 16 9 N -0.69 -0.84 4.38 -55.79 -0.24 -1.09 16 10 C 0.15 -0.11 2.73 -67.93 -0.19 -0.30 16 11 H 0.08 -0.07 7.25 -51.93 -0.38 -0.45 16 12 C -0.14 0.04 5.62 -26.73 -0.15 -0.11 16 13 C -0.11 -0.06 4.94 -26.73 -0.13 -0.19 16 14 C -0.09 0.06 2.43 -90.62 -0.22 -0.16 16 15 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 16 C 0.08 -0.03 6.43 37.16 0.24 0.21 16 17 O -0.57 -0.52 13.19 -35.23 -0.46 -0.98 16 18 C -0.12 0.23 5.03 -26.73 -0.13 0.10 16 19 C -0.12 0.27 5.61 -26.73 -0.15 0.12 16 20 S 0.10 0.28 21.70 -107.50 -2.33 -2.06 16 21 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 22 H 0.09 0.13 6.61 -51.93 -0.34 -0.22 16 23 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 24 H 0.08 0.01 7.96 -51.93 -0.41 -0.40 16 25 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 26 H -0.25 -1.28 7.11 56.52 0.40 -0.88 16 27 H -0.26 -1.54 7.11 56.52 0.40 -1.14 16 28 H 0.41 0.38 6.99 -40.82 -0.29 0.09 16 29 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.07 0.06 8.06 -51.93 -0.42 -0.36 16 31 H 0.06 0.10 7.60 -51.93 -0.39 -0.29 16 32 H 0.07 0.15 7.82 -51.93 -0.41 -0.26 16 33 H 0.04 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 35 H 0.38 -1.15 9.12 45.56 0.42 -0.74 16 36 H 0.06 -0.11 6.51 -51.93 -0.34 -0.45 16 37 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 39 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 LS Contribution 319.56 15.07 4.82 4.82 Total: 0.00 -8.07 319.56 -11.06 -19.13 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -5.16 Total: -10.98 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -1.77 Total: -0.76 kcal Atomic # 7 Polarization: -4.02 SS G_CDS: -0.35 Total: -4.36 kcal Atomic # 8 Polarization: -0.67 SS G_CDS: -0.81 Total: -1.48 kcal Atomic # 14 Polarization: 1.14 SS G_CDS: -5.45 Total: -4.31 kcal Atomic # 16 Polarization: 0.28 SS G_CDS: -2.33 Total: -2.06 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -8.07 -11.06 -19.13 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_7044652_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.764 kcal (2) G-P(sol) polarization free energy of solvation -8.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.059 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.132 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds