Wall clock time and date at job start Tue Mar 9 2021 13:37:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.33330 * 125.94702 * 2 1 4 4 C 1.50699 * 122.71294 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.46830 * 329.73504 * 4 3 2 6 6 Si 1.86298 * 109.46950 * 209.73941 * 4 3 2 7 7 N 1.32122 * 114.57211 * 179.75690 * 3 2 1 8 8 C 1.29677 * 116.87298 * 0.24120 * 7 3 2 9 9 N 1.38612 * 124.95518 * 180.02562 * 8 7 3 10 10 C 1.46496 * 120.00522 * 180.02562 * 9 8 7 11 11 H 1.09005 * 109.46839 * 325.00530 * 10 9 8 12 12 C 1.52996 * 109.46981 * 85.00246 * 10 9 8 13 13 C 1.53005 * 109.47228 * 180.02562 * 12 10 9 14 14 C 1.53005 * 109.46838 * 300.00064 * 13 12 10 15 15 H 1.09007 * 109.47001 * 300.00215 * 14 13 12 16 16 C 1.52996 * 109.46772 * 179.97438 * 14 13 12 17 17 O 1.42898 * 109.47386 * 65.00301 * 16 14 13 18 18 C 1.52999 * 109.47027 * 59.99672 * 14 13 12 19 19 C 1.52993 * 109.47701 * 300.00341 * 18 14 13 20 20 S 1.70968 * 110.10158 * 0.02562 * 8 7 3 21 21 H 1.09000 * 109.46983 * 90.00679 * 1 2 3 22 22 H 1.09002 * 109.46805 * 210.00376 * 1 2 3 23 23 H 1.09003 * 109.46860 * 329.99814 * 1 2 3 24 24 H 1.08991 * 109.47351 * 89.73652 * 4 3 2 25 25 H 0.96708 * 114.00246 * 299.99864 * 5 4 3 26 26 H 1.48506 * 109.99834 * 180.02562 * 6 4 3 27 27 H 1.48502 * 110.00011 * 301.31529 * 6 4 3 28 28 H 0.97000 * 119.99651 * 0.02562 * 9 8 7 29 29 H 1.09007 * 109.47286 * 300.00365 * 12 10 9 30 30 H 1.09005 * 109.47103 * 60.00445 * 12 10 9 31 31 H 1.09003 * 109.46984 * 180.02562 * 13 12 10 32 32 H 1.08992 * 109.47096 * 59.99803 * 13 12 10 33 33 H 1.09002 * 109.46952 * 185.00139 * 16 14 13 34 34 H 1.08993 * 109.47475 * 304.99908 * 16 14 13 35 35 H 0.96693 * 114.00623 * 179.97438 * 17 16 14 36 36 H 1.08998 * 109.46893 * 179.97438 * 18 14 13 37 37 H 1.09007 * 109.46787 * 60.00412 * 18 14 13 38 38 H 1.09005 * 109.46546 * 299.99837 * 19 18 14 39 39 H 1.09001 * 109.47281 * 180.02562 * 19 18 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7414 2.4831 0.0006 5 8 0.4839 2.5034 -0.6780 6 14 2.9357 3.6166 -0.8709 7 7 3.5850 0.8188 0.0051 8 6 3.9316 -0.4308 0.0045 9 7 5.2385 -0.8925 0.0099 10 6 5.5067 -2.3327 0.0080 11 1 4.7427 -2.8453 0.5926 12 6 5.4835 -2.8539 -1.4302 13 6 5.7630 -4.3582 -1.4322 14 6 7.1384 -4.6222 -0.8162 15 1 7.9027 -4.1098 -1.4006 16 6 7.4176 -6.1264 -0.8175 17 8 7.5113 -6.5924 -2.1651 18 6 7.1616 -4.1009 0.6221 19 6 6.8820 -2.5967 0.6241 20 16 2.5414 -1.4260 -0.0037 21 1 -0.3633 -0.0001 -1.0277 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3633 0.8900 0.5139 24 1 1.6051 2.8195 1.0283 25 1 0.5298 2.2153 -1.6001 26 1 2.4066 5.0043 -0.8766 27 1 4.2568 3.5801 -0.1937 28 1 5.9756 -0.2620 0.0148 29 1 4.5034 -2.6662 -1.8690 30 1 6.2475 -2.3414 -2.0148 31 1 5.7469 -4.7295 -2.4569 32 1 4.9988 -4.8705 -0.8477 33 1 8.3564 -6.3222 -0.2993 34 1 6.6064 -6.6470 -0.3087 35 1 7.6879 -7.5399 -2.2424 36 1 8.1413 -4.2893 1.0611 37 1 6.3974 -4.6132 1.2066 38 1 7.6463 -2.0844 0.0396 39 1 6.8990 -2.2253 1.6487 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_7082252_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:18 Heat of formation + Delta-G solvation = -48.385299 kcal Electronic energy + Delta-G solvation = -20721.918083 eV Core-core repulsion = 17564.042365 eV Total energy + Delta-G solvation = -3157.875718 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.119 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.04493 -40.35260 -38.13598 -37.46561 -35.81790 -32.94149 -31.97501 -31.21719 -29.04284 -26.30971 -25.44247 -24.38327 -23.65966 -22.43941 -21.25619 -20.31318 -19.06282 -18.31877 -17.88898 -17.24610 -16.82610 -16.55221 -16.18624 -15.82568 -15.52477 -15.50312 -15.04670 -14.74844 -14.18259 -14.13657 -14.03842 -13.69752 -13.57123 -13.35054 -13.28010 -13.08280 -12.72145 -12.41850 -12.33604 -12.20386 -11.81192 -11.70258 -11.64345 -11.42103 -11.00339 -10.85475 -10.49049 -10.24605 -9.92412 -8.56056 -4.80920 0.09801 0.24660 0.86369 1.43754 1.87953 1.95279 2.00022 2.29452 3.09276 3.38341 3.42827 3.58020 3.61800 3.77977 3.82014 4.06749 4.12956 4.23240 4.25395 4.31366 4.36855 4.40421 4.43348 4.49650 4.58877 4.66746 4.77234 4.82055 4.83562 4.90739 4.96101 5.00329 5.07526 5.18419 5.26194 5.31996 5.37061 5.66014 6.31677 6.55047 6.61044 7.03174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C -0.240 4.240 3 C 0.067 3.933 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.716 3.284 7 N -0.547 5.547 8 C 0.322 3.678 9 N -0.691 5.691 10 C 0.152 3.848 11 H 0.081 0.919 12 C -0.137 4.137 13 C -0.107 4.107 14 C -0.091 4.091 15 H 0.080 0.920 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.110 4.110 19 C -0.123 4.123 20 S 0.097 5.903 21 H 0.071 0.929 22 H 0.058 0.942 23 H 0.090 0.910 24 H 0.120 0.880 25 H 0.379 0.621 26 H -0.262 1.262 27 H -0.253 1.253 28 H 0.411 0.589 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.077 0.923 32 H 0.063 0.937 33 H 0.046 0.954 34 H 0.046 0.954 35 H 0.381 0.619 36 H 0.073 0.927 37 H 0.069 0.931 38 H 0.074 0.926 39 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.530 -4.870 -0.870 5.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.363 4.363 3 C -0.063 4.063 4 C -0.147 4.147 5 O -0.341 6.341 6 Si 0.616 3.384 7 N -0.273 5.273 8 C -0.049 4.049 9 N -0.331 5.331 10 C 0.047 3.953 11 H 0.099 0.901 12 C -0.176 4.176 13 C -0.146 4.146 14 C -0.109 4.109 15 H 0.099 0.901 16 C 0.001 3.999 17 O -0.379 6.379 18 C -0.148 4.148 19 C -0.161 4.161 20 S 0.346 5.654 21 H 0.089 0.911 22 H 0.077 0.923 23 H 0.109 0.891 24 H 0.137 0.863 25 H 0.226 0.774 26 H -0.188 1.188 27 H -0.177 1.177 28 H 0.249 0.751 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.096 0.904 32 H 0.082 0.918 33 H 0.064 0.936 34 H 0.065 0.935 35 H 0.228 0.772 36 H 0.092 0.908 37 H 0.088 0.912 38 H 0.093 0.907 39 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 2.006 -4.193 -0.334 4.660 hybrid contribution 0.084 0.045 0.787 0.793 sum 2.090 -4.148 0.454 4.667 Atomic orbital electron populations 1.20204 0.86435 1.03072 1.02704 1.25140 1.01297 0.92759 1.17127 1.20125 0.86786 0.97115 1.02315 1.24505 0.92521 0.95598 1.02041 1.86502 1.28947 1.89713 1.28896 0.94073 0.77607 0.76398 0.90273 1.65972 1.17243 1.16661 1.27463 1.23282 0.91851 0.91424 0.98371 1.44091 1.01765 1.07045 1.80219 1.21202 0.98376 0.78680 0.97086 0.90063 1.22080 1.02903 0.96522 0.96068 1.21494 0.96030 0.94743 1.02288 1.21209 0.98691 0.94435 0.96575 0.90119 1.22214 0.99579 0.94678 0.83448 1.86467 1.95297 1.29367 1.26748 1.21468 1.02713 0.94540 0.96071 1.21738 0.95473 0.97142 1.01723 1.83988 0.96608 1.10618 1.74183 0.91059 0.92335 0.89105 0.86323 0.77357 1.18788 1.17672 0.75063 0.91261 0.90981 0.90437 0.91803 0.93573 0.93537 0.77190 0.90791 0.91223 0.90697 0.90638 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.02 8.95 36.01 0.32 0.31 16 2 C -0.24 -0.47 6.50 -36.02 -0.23 -0.71 16 3 C 0.07 0.18 5.92 -84.18 -0.50 -0.31 16 4 C -0.03 -0.05 2.82 36.01 0.10 0.05 16 5 O -0.54 -0.23 9.91 -35.23 -0.35 -0.58 16 6 Si 0.72 1.05 32.08 -169.99 -5.45 -4.41 16 7 N -0.55 -2.02 8.95 -11.36 -0.10 -2.12 16 8 C 0.32 0.71 8.22 -87.69 -0.72 -0.01 16 9 N -0.69 -0.03 5.23 -55.79 -0.29 -0.32 16 10 C 0.15 -0.23 2.40 -67.94 -0.16 -0.39 16 11 H 0.08 -0.09 7.26 -51.93 -0.38 -0.47 16 12 C -0.14 0.17 5.51 -26.73 -0.15 0.02 16 13 C -0.11 0.14 5.10 -26.73 -0.14 0.00 16 14 C -0.09 0.16 2.43 -90.62 -0.22 -0.06 16 15 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 16 C 0.08 -0.14 6.43 37.16 0.24 0.10 16 17 O -0.57 0.18 13.19 -35.23 -0.46 -0.28 16 18 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 19 C -0.12 0.33 5.39 -26.74 -0.14 0.18 16 20 S 0.10 0.12 21.69 -107.50 -2.33 -2.21 16 21 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 22 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 23 H 0.09 0.08 6.62 -51.93 -0.34 -0.26 16 24 H 0.12 0.24 7.96 -51.93 -0.41 -0.18 16 25 H 0.38 -1.11 8.68 45.56 0.40 -0.72 16 26 H -0.26 -1.00 7.11 56.52 0.40 -0.59 16 27 H -0.25 -1.25 7.11 56.52 0.40 -0.85 16 28 H 0.41 -0.22 8.73 -40.82 -0.36 -0.57 16 29 H 0.07 -0.03 8.04 -51.93 -0.42 -0.44 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.08 0.01 7.82 -51.93 -0.41 -0.40 16 32 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.05 -0.11 8.14 -51.93 -0.42 -0.54 16 34 H 0.05 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 36 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 37 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 39 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 LS Contribution 323.93 15.07 4.88 4.88 Total: 0.00 -6.19 323.93 -11.20 -17.39 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -5.35 Total: -11.71 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.74 Total: -0.64 kcal Atomic # 7 Polarization: -2.05 SS G_CDS: -0.39 Total: -2.44 kcal Atomic # 8 Polarization: -0.05 SS G_CDS: -0.81 Total: -0.86 kcal Atomic # 14 Polarization: 1.05 SS G_CDS: -5.45 Total: -4.41 kcal Atomic # 16 Polarization: 0.12 SS G_CDS: -2.33 Total: -2.21 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -6.19 -11.20 -17.39 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_7082252_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.994 kcal (2) G-P(sol) polarization free energy of solvation -6.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.391 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds