Wall clock time and date at job start Tue Mar 9 2021 13:37:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47151 * 2 1 4 4 C 1.50697 * 109.46650 * 119.99881 * 2 1 3 5 5 C 1.38845 * 120.34024 * 65.00295 * 4 2 1 6 6 C 1.38342 * 118.50810 * 179.72427 * 5 4 2 7 7 C 1.39093 * 119.10002 * 359.97438 * 6 5 4 8 8 N 1.39000 * 119.70654 * 180.02562 * 7 6 5 9 9 C 1.46497 * 120.00141 * 0.02562 * 8 7 6 10 10 H 1.09004 * 109.46700 * 35.00411 * 9 8 7 11 11 C 1.53000 * 109.47321 * 154.99858 * 9 8 7 12 12 C 1.53005 * 109.47284 * 180.02562 * 11 9 8 13 13 C 1.53006 * 109.46474 * 300.00213 * 12 11 9 14 14 H 1.08998 * 109.47055 * 299.99745 * 13 12 11 15 15 O 1.42903 * 109.46475 * 180.02562 * 13 12 11 16 16 C 1.52993 * 109.47394 * 60.00408 * 13 12 11 17 17 C 1.53000 * 109.47388 * 275.00412 * 9 8 7 18 18 N 1.32427 * 120.58771 * 0.03207 * 7 6 5 19 19 C 1.31942 * 121.62381 * 359.94604 * 18 7 6 20 20 H 0.96699 * 113.99992 * 300.00181 * 1 2 3 21 21 H 1.09000 * 109.46969 * 239.99288 * 2 1 3 22 22 H 1.48498 * 109.99622 * 178.68179 * 3 2 1 23 23 H 1.48493 * 109.99755 * 299.99525 * 3 2 1 24 24 H 1.08001 * 120.74237 * 359.74107 * 5 4 2 25 25 H 1.07993 * 120.44550 * 179.97438 * 6 5 4 26 26 H 0.97000 * 120.00055 * 180.02562 * 8 7 6 27 27 H 1.09001 * 109.46915 * 300.00464 * 11 9 8 28 28 H 1.08998 * 109.47110 * 60.00284 * 11 9 8 29 29 H 1.08998 * 109.47271 * 59.99825 * 12 11 9 30 30 H 1.08993 * 109.47124 * 180.02562 * 12 11 9 31 31 H 0.96700 * 113.99717 * 180.02562 * 15 13 12 32 32 H 1.08998 * 109.47561 * 59.99646 * 16 13 12 33 33 H 1.08998 * 109.46994 * 180.02562 * 16 13 12 34 34 H 1.08998 * 109.46775 * 299.99552 * 17 9 8 35 35 H 1.08993 * 109.47299 * 59.99680 * 17 9 8 36 36 H 1.08006 * 119.57016 * 180.02562 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6875 -2.0659 1.4063 6 6 2.1709 -2.6812 2.5472 7 6 2.8812 -1.9254 3.4741 8 7 3.3731 -2.5309 4.6245 9 6 3.1431 -3.9590 4.8563 10 1 3.1681 -4.4901 3.9048 11 6 4.2352 -4.5088 5.7760 12 6 3.9953 -6.0005 6.0176 13 6 2.6278 -6.1971 6.6752 14 1 2.6027 -5.6662 7.6269 15 8 2.4041 -7.5903 6.9014 16 6 1.5358 -5.6474 5.7555 17 6 1.7757 -4.1552 5.5141 18 7 3.0928 -0.6341 3.2703 19 6 2.6440 -0.0214 2.1914 20 1 -0.3933 0.4417 0.7650 21 1 1.7923 -0.5139 -0.8899 22 1 3.5346 1.7702 0.0321 23 1 1.5616 2.4678 -1.2085 24 1 1.1333 -2.6274 0.6688 25 1 1.9991 -3.7339 2.7158 26 1 3.8686 -2.0078 5.2739 27 1 5.2093 -4.3690 5.3073 28 1 4.2102 -3.9777 6.7276 29 1 4.0205 -6.5314 5.0660 30 1 4.7730 -6.3921 6.6732 31 1 1.5538 -7.7897 7.3166 32 1 1.5610 -6.1782 4.8039 33 1 0.5617 -5.7871 6.2242 34 1 1.7508 -3.6241 6.4657 35 1 0.9977 -3.7636 4.8589 36 1 2.8361 1.0331 2.0586 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_7763798_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:36 Heat of formation + Delta-G solvation = -46.175770 kcal Electronic energy + Delta-G solvation = -18471.789444 eV Core-core repulsion = 15535.932530 eV Total energy + Delta-G solvation = -2935.856914 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.131 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.52161 -40.23124 -38.11950 -37.27681 -35.05254 -33.38840 -32.07961 -31.57977 -29.17872 -26.16717 -24.94109 -23.84842 -23.40927 -22.19395 -21.14892 -18.70782 -18.50858 -18.27431 -17.70481 -16.62135 -16.49784 -16.18764 -15.81626 -15.66790 -15.47397 -15.14050 -14.66459 -14.31889 -14.20660 -14.03795 -13.50102 -13.46229 -13.34980 -13.07742 -12.57908 -12.35066 -12.31687 -12.01537 -11.92312 -11.52250 -11.09708 -10.86470 -10.71760 -10.39630 -10.37292 -8.71677 -5.02648 0.25244 0.43125 1.31901 1.64755 1.99291 2.00529 2.86330 3.09175 3.40836 3.49754 3.55123 3.61213 3.78726 3.85401 3.90472 4.00337 4.04248 4.06733 4.14760 4.22617 4.27168 4.34705 4.52431 4.54924 4.69716 4.74603 4.75663 4.88014 4.92987 4.95092 5.01378 5.08822 5.19216 5.32495 5.51952 5.98541 6.51996 6.59992 6.60574 7.16007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.680 3.320 4 C -0.237 4.237 5 C -0.005 4.005 6 C -0.240 4.240 7 C 0.410 3.590 8 N -0.719 5.719 9 C 0.153 3.847 10 H 0.085 0.915 11 C -0.123 4.123 12 C -0.110 4.110 13 C 0.102 3.898 14 H 0.057 0.943 15 O -0.568 6.568 16 C -0.150 4.150 17 C -0.133 4.133 18 N -0.540 5.540 19 C 0.158 3.842 20 H 0.378 0.622 21 H 0.111 0.889 22 H -0.256 1.256 23 H -0.253 1.253 24 H 0.135 0.865 25 H 0.133 0.867 26 H 0.406 0.594 27 H 0.079 0.921 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.077 0.923 31 H 0.380 0.620 32 H 0.073 0.927 33 H 0.070 0.930 34 H 0.070 0.930 35 H 0.071 0.929 36 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.419 -0.244 3.010 3.337 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.582 3.418 4 C -0.242 4.242 5 C -0.031 4.031 6 C -0.265 4.265 7 C 0.174 3.826 8 N -0.351 5.351 9 C 0.047 3.953 10 H 0.102 0.898 11 C -0.161 4.161 12 C -0.148 4.148 13 C 0.043 3.957 14 H 0.075 0.925 15 O -0.374 6.374 16 C -0.189 4.189 17 C -0.172 4.172 18 N -0.257 5.257 19 C 0.000 4.000 20 H 0.225 0.775 21 H 0.129 0.871 22 H -0.181 1.181 23 H -0.178 1.178 24 H 0.153 0.847 25 H 0.151 0.849 26 H 0.242 0.758 27 H 0.097 0.903 28 H 0.092 0.908 29 H 0.093 0.907 30 H 0.096 0.904 31 H 0.227 0.773 32 H 0.092 0.908 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.090 0.910 36 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.190 0.266 2.395 2.417 hybrid contribution -0.778 -0.811 -0.249 1.151 sum -0.588 -0.545 2.146 2.291 Atomic orbital electron populations 1.86493 1.17362 1.81682 1.49249 1.24785 0.84998 1.09680 0.96933 0.94912 0.81194 0.78135 0.87546 1.20985 1.06975 0.96117 1.00108 1.21196 0.93141 0.93419 0.95331 1.21489 1.06736 1.01331 0.96953 1.18379 0.89118 0.88401 0.86696 1.44584 1.60227 1.09106 1.21145 1.21071 0.94711 0.80185 0.99325 0.89752 1.21747 0.98699 0.95653 1.00046 1.21410 0.96161 0.95203 1.01990 1.21851 0.94818 0.81917 0.97084 0.92537 1.86523 1.42493 1.24097 1.84248 1.22258 0.99311 0.95876 1.01414 1.22004 0.97345 0.96040 1.01833 1.67141 1.25856 1.09012 1.23660 1.22192 0.91357 0.98698 0.87747 0.77456 0.87117 1.18083 1.17805 0.84723 0.84894 0.75848 0.90264 0.90822 0.90748 0.90403 0.77255 0.90788 0.91139 0.91129 0.91009 0.82847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.18 12.84 -35.23 -0.45 -0.63 16 2 C -0.05 0.00 2.82 36.00 0.10 0.10 16 3 Si 0.68 -0.57 29.83 -169.99 -5.07 -5.65 16 4 C -0.24 -0.16 5.36 -104.46 -0.56 -0.72 16 5 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 6 C -0.24 -0.18 8.83 -39.23 -0.35 -0.52 16 7 C 0.41 0.65 7.63 -155.02 -1.18 -0.53 16 8 N -0.72 0.32 5.25 -53.94 -0.28 0.03 16 9 C 0.15 -0.29 2.14 -67.93 -0.15 -0.44 16 10 H 0.08 -0.14 6.45 -51.93 -0.34 -0.47 16 11 C -0.12 0.31 5.39 -26.73 -0.14 0.16 16 12 C -0.11 0.17 5.57 -26.73 -0.15 0.02 16 13 C 0.10 -0.15 3.47 -26.73 -0.09 -0.24 16 14 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 15 O -0.57 0.02 13.32 -35.23 -0.47 -0.45 16 16 C -0.15 0.34 5.55 -26.71 -0.15 0.20 16 17 C -0.13 0.28 5.42 -26.71 -0.14 0.13 16 18 N -0.54 -1.44 10.39 -12.44 -0.13 -1.57 16 19 C 0.16 0.18 9.84 -17.57 -0.17 0.01 16 20 H 0.38 -1.28 8.70 45.56 0.40 -0.88 16 21 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 22 H -0.26 -0.42 7.11 56.52 0.40 -0.01 16 23 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 24 H 0.13 -0.04 8.06 -52.49 -0.42 -0.47 16 25 H 0.13 -0.10 6.07 -52.49 -0.32 -0.42 16 26 H 0.41 -0.36 8.73 -40.82 -0.36 -0.72 16 27 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.38 -1.44 9.08 45.56 0.41 -1.02 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.07 -0.09 7.65 -51.93 -0.40 -0.49 16 36 H 0.15 -0.16 4.91 -52.48 -0.26 -0.42 16 LS Contribution 290.44 15.07 4.38 4.38 Total: 0.00 -6.40 290.44 -9.67 -16.07 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -4.27 Total: -9.97 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -3.37 Total: -2.22 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.41 Total: -1.53 kcal Atomic # 8 Polarization: -0.16 SS G_CDS: -0.92 Total: -1.08 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.07 Total: -5.65 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -6.40 -9.67 -16.07 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_7763798_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.105 kcal (2) G-P(sol) polarization free energy of solvation -6.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.071 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.176 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds