Wall clock time and date at job start Tue Mar 9 2021 13:40:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.39010 * 119.99850 * 2 1 4 4 N 1.32397 * 119.70403 * 11.24220 * 3 2 1 5 5 C 1.31977 * 121.61810 * 179.97438 * 4 3 2 6 6 C 1.38021 * 120.85839 * 0.28498 * 5 4 3 7 7 C 1.50691 * 120.33737 * 179.71674 * 6 5 4 8 8 O 1.42900 * 109.47412 * 244.99871 * 7 6 5 9 9 Si 1.86306 * 109.46996 * 4.99851 * 7 6 5 10 10 C 1.38893 * 119.32607 * 359.42700 * 6 5 4 11 11 C 1.38295 * 118.50585 * 0.55400 * 10 6 5 12 12 C 1.46497 * 119.99922 * 180.02562 * 2 1 3 13 13 H 1.08998 * 109.47258 * 185.32495 * 12 2 1 14 14 C 1.52997 * 109.47026 * 305.32908 * 12 2 1 15 15 C 1.53009 * 109.46744 * 180.02562 * 14 12 2 16 16 C 1.53002 * 109.46752 * 299.99492 * 15 14 12 17 17 H 1.08995 * 109.47410 * 299.99878 * 16 15 14 18 18 O 1.42905 * 109.46797 * 180.02562 * 16 15 14 19 19 C 1.52997 * 109.47081 * 60.00714 * 16 15 14 20 20 C 1.52999 * 109.46969 * 299.99621 * 19 16 15 21 21 H 1.08998 * 109.47263 * 89.99438 * 1 2 3 22 22 H 1.08996 * 109.46970 * 209.99844 * 1 2 3 23 23 H 1.09000 * 109.47069 * 330.00271 * 1 2 3 24 24 H 1.07998 * 119.56644 * 180.02562 * 5 4 3 25 25 H 1.09003 * 109.47239 * 124.99612 * 7 6 5 26 26 H 0.96703 * 113.99563 * 179.97438 * 8 7 6 27 27 H 1.48496 * 110.00029 * 299.99627 * 9 7 6 28 28 H 1.48503 * 109.99788 * 61.32042 * 9 7 6 29 29 H 1.08001 * 120.74387 * 180.27031 * 10 6 5 30 30 H 1.08000 * 120.45388 * 179.71079 * 11 10 6 31 31 H 1.09002 * 109.47110 * 299.99620 * 14 12 2 32 32 H 1.08995 * 109.47681 * 60.00151 * 14 12 2 33 33 H 1.08995 * 109.47063 * 59.99583 * 15 14 12 34 34 H 1.08999 * 109.46551 * 179.97438 * 15 14 12 35 35 H 0.96698 * 113.99622 * 180.02562 * 18 16 15 36 36 H 1.08995 * 109.47681 * 59.99330 * 19 16 15 37 37 H 1.09002 * 109.47110 * 179.97438 * 19 16 15 38 38 H 1.08999 * 109.47157 * 299.99770 * 20 19 16 39 39 H 1.09002 * 109.47275 * 180.02562 * 20 19 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1600 1.2039 0.0000 4 7 1.5112 2.3360 0.2242 5 6 2.1333 3.4999 0.2333 6 6 3.4917 3.5783 0.0018 7 6 4.1891 4.9142 0.0086 8 8 4.6939 5.1947 -1.2985 9 14 2.9813 6.2426 0.5061 10 6 4.2105 2.4130 -0.2315 11 6 3.5314 1.2082 -0.2348 12 6 2.1975 -1.2687 -0.0006 13 1 3.2653 -1.0718 0.0949 14 6 1.7300 -2.1279 1.1759 15 6 2.4956 -3.4528 1.1756 16 6 2.2295 -4.1951 -0.1355 17 1 1.1619 -4.3924 -0.2312 18 8 2.9440 -5.4327 -0.1356 19 6 2.6970 -3.3359 -1.3120 20 6 1.9316 -2.0111 -1.3117 21 1 -0.3634 0.0001 -1.0276 22 1 -0.3633 -0.8900 0.5138 23 1 -0.3633 0.8900 0.5138 24 1 1.5714 4.4030 0.4202 25 1 5.0150 4.8893 0.7195 26 1 5.1558 6.0414 -1.3683 27 1 1.8505 6.2869 -0.4553 28 1 2.4731 5.9796 1.8765 29 1 5.2749 2.4474 -0.4109 30 1 4.0584 0.2833 -0.4174 31 1 1.9199 -1.5992 2.1100 32 1 0.6623 -2.3249 1.0804 33 1 3.5632 -3.2555 1.2713 34 1 2.1629 -4.0647 2.0140 35 1 2.8219 -5.9573 -0.9387 36 1 3.7646 -3.1386 -1.2163 37 1 2.5078 -3.8650 -2.2461 38 1 0.8639 -2.2083 -1.4075 39 1 2.2642 -1.3991 -2.1501 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9156392_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:33 Heat of formation + Delta-G solvation = -31.220071 kcal Electronic energy + Delta-G solvation = -20557.213867 eV Core-core repulsion = 17466.467862 eV Total energy + Delta-G solvation = -3090.746005 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.146 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.59300 -40.28318 -38.21313 -37.40729 -35.41933 -33.43237 -32.17724 -31.99320 -29.85485 -27.95553 -25.91072 -24.13436 -23.93163 -23.32640 -21.83865 -20.74330 -18.74825 -18.41194 -18.29341 -17.79833 -16.86794 -16.29991 -16.23990 -15.95206 -15.66473 -15.20971 -15.02977 -14.82412 -14.31450 -14.20220 -14.12300 -13.88515 -13.72808 -13.45565 -13.32250 -13.05757 -12.80780 -12.49698 -12.29706 -12.21074 -11.97876 -11.70370 -11.41856 -10.97000 -10.82504 -10.67230 -10.52964 -10.13798 -8.52937 -4.97676 0.23290 0.44175 1.30446 1.65634 1.81251 1.98392 2.81149 3.10772 3.34575 3.48805 3.53416 3.56994 3.80412 3.88598 3.88906 3.96768 4.05864 4.11558 4.14640 4.22994 4.26164 4.28669 4.44052 4.44369 4.54945 4.64208 4.72122 4.73186 4.76658 4.89984 4.94567 4.97979 4.98885 5.01614 5.14387 5.21946 5.33218 5.54565 5.93050 6.36574 6.61856 6.65061 7.12844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.606 5.606 3 C 0.409 3.591 4 N -0.536 5.536 5 C 0.150 3.850 6 C -0.190 4.190 7 C -0.056 4.056 8 O -0.548 6.548 9 Si 0.677 3.323 10 C -0.003 4.003 11 C -0.237 4.237 12 C 0.151 3.849 13 H 0.094 0.906 14 C -0.127 4.127 15 C -0.110 4.110 16 C 0.103 3.897 17 H 0.056 0.944 18 O -0.568 6.568 19 C -0.149 4.149 20 C -0.128 4.128 21 H 0.047 0.953 22 H 0.067 0.933 23 H 0.081 0.919 24 H 0.146 0.854 25 H 0.072 0.928 26 H 0.381 0.619 27 H -0.249 1.249 28 H -0.253 1.253 29 H 0.137 0.863 30 H 0.136 0.864 31 H 0.075 0.925 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.076 0.924 35 H 0.380 0.620 36 H 0.074 0.926 37 H 0.070 0.930 38 H 0.069 0.931 39 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.735 0.822 -0.294 1.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 N -0.318 5.318 3 C 0.175 3.825 4 N -0.252 5.252 5 C -0.007 4.007 6 C -0.195 4.195 7 C -0.167 4.167 8 O -0.354 6.354 9 Si 0.579 3.421 10 C -0.028 4.028 11 C -0.262 4.262 12 C 0.047 3.953 13 H 0.112 0.888 14 C -0.166 4.166 15 C -0.148 4.148 16 C 0.044 3.956 17 H 0.074 0.926 18 O -0.373 6.373 19 C -0.188 4.188 20 C -0.167 4.167 21 H 0.066 0.934 22 H 0.085 0.915 23 H 0.099 0.901 24 H 0.162 0.838 25 H 0.090 0.910 26 H 0.229 0.771 27 H -0.174 1.174 28 H -0.178 1.178 29 H 0.155 0.845 30 H 0.154 0.846 31 H 0.094 0.906 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.095 0.905 35 H 0.227 0.773 36 H 0.092 0.908 37 H 0.089 0.911 38 H 0.088 0.912 39 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.198 0.442 0.572 0.750 hybrid contribution 0.782 -0.689 -0.788 1.307 sum 0.584 -0.246 -0.216 0.670 Atomic orbital electron populations 1.21612 0.78817 1.03204 1.01387 1.46392 1.05682 1.01574 1.78201 1.18351 0.88229 0.86130 0.89833 1.67131 1.39821 0.97533 1.20721 1.22043 0.90863 0.94381 0.93404 1.20013 0.94653 0.94845 1.09982 1.24425 1.04048 0.99771 0.88472 1.86503 1.77174 1.43234 1.28495 0.95340 0.80396 0.86466 0.79936 1.21177 1.00240 0.90528 0.90893 1.21523 0.93848 0.99603 1.11210 1.21203 0.97013 0.82138 0.94961 0.88791 1.21892 1.00938 0.95150 0.98592 1.21429 1.01534 0.94971 0.96867 1.21843 0.94872 0.83853 0.95035 0.92595 1.86525 1.73299 1.32639 1.44870 1.22248 1.01344 0.96141 0.99042 1.21883 1.01312 0.95894 0.97592 0.93405 0.91489 0.90071 0.83755 0.91027 0.77147 1.17388 1.17809 0.84471 0.84631 0.90610 0.90934 0.90841 0.90542 0.77291 0.90757 0.91089 0.91189 0.91003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.07 9.82 59.85 0.59 0.66 16 2 N -0.61 -0.94 2.88 -174.09 -0.50 -1.44 16 3 C 0.41 1.49 7.33 -155.01 -1.14 0.35 16 4 N -0.54 -2.74 9.08 -12.44 -0.11 -2.86 16 5 C 0.15 0.65 9.84 -17.57 -0.17 0.48 16 6 C -0.19 -0.58 5.39 -104.46 -0.56 -1.15 16 7 C -0.06 -0.02 2.81 36.00 0.10 0.08 16 8 O -0.55 -0.27 12.82 -35.23 -0.45 -0.72 16 9 Si 0.68 -0.46 29.88 -169.99 -5.08 -5.54 16 10 C 0.00 -0.01 9.84 -39.32 -0.39 -0.39 16 11 C -0.24 -0.55 9.24 -39.23 -0.36 -0.91 16 12 C 0.15 -0.07 2.37 -67.93 -0.16 -0.23 16 13 H 0.09 -0.06 5.51 -51.93 -0.29 -0.34 16 14 C -0.13 0.13 5.07 -26.73 -0.14 -0.01 16 15 C -0.11 0.07 5.57 -26.73 -0.15 -0.08 16 16 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 17 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 18 O -0.57 -0.23 13.32 -35.23 -0.47 -0.70 16 19 C -0.15 0.25 5.55 -26.73 -0.15 0.10 16 20 C -0.13 0.15 5.28 -26.73 -0.14 0.01 16 21 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 22 H 0.07 -0.06 6.16 -51.93 -0.32 -0.38 16 23 H 0.08 0.17 7.24 -51.93 -0.38 -0.21 16 24 H 0.15 0.50 4.87 -52.49 -0.26 0.25 16 25 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 26 H 0.38 -1.75 8.74 45.56 0.40 -1.36 16 27 H -0.25 -0.63 7.05 56.52 0.40 -0.23 16 28 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 29 H 0.14 0.06 8.06 -52.49 -0.42 -0.36 16 30 H 0.14 0.03 5.98 -52.49 -0.31 -0.28 16 31 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 -0.09 6.51 -51.93 -0.34 -0.43 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 35 H 0.38 -1.29 9.08 45.56 0.41 -0.87 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.07 -0.08 7.81 -51.93 -0.41 -0.49 16 39 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 LS Contribution 306.78 15.07 4.62 4.62 Total: 0.00 -7.29 306.78 -9.65 -16.94 By element: Atomic # 1 Polarization: -4.14 SS G_CDS: -4.90 Total: -9.04 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -2.76 Total: -1.28 kcal Atomic # 7 Polarization: -3.68 SS G_CDS: -0.61 Total: -4.29 kcal Atomic # 8 Polarization: -0.50 SS G_CDS: -0.92 Total: -1.42 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.08 Total: -5.54 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -7.29 -9.65 -16.94 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9156392_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.275 kcal (2) G-P(sol) polarization free energy of solvation -7.292 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.567 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.945 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds