Wall clock time and date at job start Tue Mar 9 2021 13:40:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.38612 * 119.99834 * 2 1 4 4 N 1.29689 * 124.94621 * 179.69345 * 3 2 1 5 5 C 1.32125 * 116.86303 * 179.81362 * 4 3 2 6 6 C 1.33331 * 114.57880 * 0.47111 * 5 4 3 7 7 C 1.50697 * 125.94755 * 179.75229 * 6 5 4 8 8 O 1.42904 * 109.47010 * 120.00420 * 7 6 5 9 9 Si 1.86292 * 109.47680 * 0.02562 * 7 6 5 10 10 S 1.70963 * 124.94964 * 359.97438 * 3 2 1 11 11 C 1.46499 * 120.00271 * 179.97438 * 2 1 3 12 12 H 1.09002 * 109.47391 * 180.02562 * 11 2 1 13 13 C 1.53000 * 109.46840 * 300.00476 * 11 2 1 14 14 C 1.53001 * 109.46886 * 180.02562 * 13 11 2 15 15 C 1.53002 * 109.46963 * 299.99499 * 14 13 11 16 16 H 1.09002 * 109.47067 * 300.00341 * 15 14 13 17 17 O 1.42900 * 109.47442 * 180.02562 * 15 14 13 18 18 C 1.52997 * 109.47092 * 60.00194 * 15 14 13 19 19 C 1.53002 * 109.46799 * 60.00241 * 11 2 1 20 20 H 1.08994 * 109.47057 * 270.00052 * 1 2 3 21 21 H 1.09006 * 109.46711 * 30.00213 * 1 2 3 22 22 H 1.08998 * 109.46853 * 150.00007 * 1 2 3 23 23 H 1.07997 * 122.71090 * 180.22353 * 5 4 3 24 24 H 1.09008 * 109.46818 * 239.99802 * 7 6 5 25 25 H 0.96694 * 113.99920 * 299.99833 * 8 7 6 26 26 H 1.48502 * 109.99811 * 58.68056 * 9 7 6 27 27 H 1.48499 * 110.00280 * 179.97438 * 9 7 6 28 28 H 1.09001 * 109.47194 * 299.99493 * 13 11 2 29 29 H 1.08992 * 109.47399 * 59.99666 * 13 11 2 30 30 H 1.09000 * 109.47437 * 180.02562 * 14 13 11 31 31 H 1.09002 * 109.47508 * 59.99571 * 14 13 11 32 32 H 0.96697 * 113.99983 * 59.99480 * 17 15 14 33 33 H 1.09001 * 109.47375 * 180.02562 * 18 15 14 34 34 H 1.09002 * 109.47497 * 59.99850 * 18 15 14 35 35 H 1.09002 * 109.47075 * 299.99543 * 19 11 2 36 36 H 1.08996 * 109.47407 * 60.00500 * 19 11 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1580 1.2004 0.0000 4 7 3.4501 1.3123 0.0057 5 6 3.9432 2.5380 0.0009 6 6 3.0253 3.5051 0.0006 7 6 3.3012 4.9866 0.0009 8 8 2.7265 5.5784 -1.1660 9 14 5.1415 5.2758 0.0009 10 16 1.4341 2.7492 -0.0006 11 6 2.1975 -1.2687 0.0006 12 1 3.2692 -1.0695 0.0009 13 6 1.8278 -2.0704 1.2501 14 6 2.5934 -3.3951 1.2511 15 6 2.2243 -4.1983 0.0022 16 1 1.1527 -4.3978 0.0020 17 8 2.9388 -5.4358 0.0032 18 6 2.5940 -3.3965 -1.2474 19 6 1.8280 -2.0715 -1.2484 20 1 -0.3633 0.0000 1.0276 21 1 -0.3633 0.8900 -0.5139 22 1 -0.3633 -0.8900 -0.5138 23 1 5.0041 2.7403 0.0013 24 1 2.8621 5.4378 0.8908 25 1 3.0713 5.2241 -1.9971 26 1 5.7558 4.6383 -1.1913 27 1 5.4268 6.7331 0.0006 28 1 2.0911 -1.4985 2.1399 29 1 0.7563 -2.2696 1.2502 30 1 2.3297 -3.9666 2.1410 31 1 3.6650 -3.1956 1.2512 32 1 2.7527 -5.9968 0.7685 33 1 2.3307 -3.9685 -2.1372 34 1 3.6655 -3.1969 -1.2473 35 1 0.7563 -2.2707 -1.2483 36 1 2.0913 -1.5003 -2.1386 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9156392_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:36 Heat of formation + Delta-G solvation = -28.591234 kcal Electronic energy + Delta-G solvation = -19117.487052 eV Core-core repulsion = 16116.007289 eV Total energy + Delta-G solvation = -3001.479764 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.103 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.07326 -40.10273 -38.26911 -37.57385 -35.44787 -31.97679 -31.80670 -30.02583 -28.36835 -25.75427 -24.71067 -23.90905 -22.84152 -21.03275 -20.29277 -19.59921 -18.27163 -17.74802 -17.48892 -16.78259 -16.56321 -15.98240 -15.92574 -15.65360 -15.45699 -14.89331 -14.82597 -14.37766 -14.18168 -13.77224 -13.69899 -13.44140 -13.29433 -12.91219 -12.83144 -12.42388 -12.30800 -12.27426 -11.89063 -11.71767 -11.42174 -11.00787 -10.78638 -10.63922 -10.42062 -10.07348 -8.60286 -4.96462 -0.01666 0.11545 0.76879 1.43842 1.61043 1.75970 1.98909 1.99491 3.12702 3.34877 3.45924 3.54507 3.60336 3.87052 3.90083 4.00850 4.03638 4.10235 4.17527 4.27815 4.30858 4.34814 4.43482 4.50154 4.55457 4.68152 4.77996 4.81199 4.90570 4.99189 5.03819 5.10996 5.18254 5.27729 5.65826 5.98606 6.37902 6.64816 6.95242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.577 5.577 3 C 0.317 3.683 4 N -0.551 5.551 5 C 0.098 3.902 6 C -0.306 4.306 7 C -0.030 4.030 8 O -0.531 6.531 9 Si 0.698 3.302 10 S 0.122 5.878 11 C 0.154 3.846 12 H 0.108 0.892 13 C -0.125 4.125 14 C -0.149 4.149 15 C 0.103 3.897 16 H 0.055 0.945 17 O -0.567 6.567 18 C -0.110 4.110 19 C -0.126 4.126 20 H 0.062 0.938 21 H 0.070 0.930 22 H 0.084 0.916 23 H 0.174 0.826 24 H 0.117 0.883 25 H 0.377 0.623 26 H -0.256 1.256 27 H -0.253 1.253 28 H 0.071 0.929 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.075 0.925 32 H 0.379 0.621 33 H 0.075 0.925 34 H 0.074 0.926 35 H 0.068 0.932 36 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.012 -2.108 2.329 3.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.294 5.294 3 C -0.052 4.052 4 N -0.276 5.276 5 C -0.053 4.053 6 C -0.429 4.429 7 C -0.141 4.141 8 O -0.337 6.337 9 Si 0.597 3.403 10 S 0.372 5.628 11 C 0.049 3.951 12 H 0.126 0.874 13 C -0.164 4.164 14 C -0.187 4.187 15 C 0.045 3.955 16 H 0.073 0.927 17 O -0.373 6.373 18 C -0.148 4.148 19 C -0.165 4.165 20 H 0.081 0.919 21 H 0.089 0.911 22 H 0.103 0.897 23 H 0.191 0.809 24 H 0.135 0.865 25 H 0.224 0.776 26 H -0.180 1.180 27 H -0.178 1.178 28 H 0.090 0.910 29 H 0.085 0.915 30 H 0.089 0.911 31 H 0.094 0.906 32 H 0.227 0.773 33 H 0.093 0.907 34 H 0.093 0.907 35 H 0.087 0.913 36 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -2.280 -1.428 1.789 3.231 hybrid contribution 0.031 -0.184 -0.490 0.525 sum -2.249 -1.612 1.299 3.057 Atomic orbital electron populations 1.21851 0.77691 1.03691 1.02497 1.46032 1.04895 1.01070 1.77453 1.23716 0.91606 0.92050 0.97796 1.66401 1.08914 1.25056 1.27221 1.21306 1.00437 0.85292 0.98313 1.25893 0.94568 1.00896 1.21585 1.24365 1.11602 0.87161 0.91004 1.86601 1.66353 1.64964 1.15796 0.94922 0.73824 0.82244 0.89331 1.84079 1.09307 0.96291 1.73074 1.21239 0.98189 0.81274 0.94385 0.87407 1.21845 1.00667 0.95717 0.98155 1.22236 1.01781 0.96181 0.98506 1.21841 0.94868 0.83967 0.94868 0.92686 1.86528 1.70298 1.30850 1.49632 1.21425 1.01482 0.94502 0.97368 1.21896 1.00742 0.95591 0.98255 0.91915 0.91146 0.89701 0.80893 0.86481 0.77564 1.18041 1.17774 0.91023 0.91452 0.91140 0.90592 0.77329 0.90654 0.90704 0.91331 0.90733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.20 9.47 59.85 0.57 0.36 16 2 N -0.58 -0.03 2.87 -176.27 -0.51 -0.54 16 3 C 0.32 0.63 7.75 -87.68 -0.68 -0.05 16 4 N -0.55 -1.74 9.54 -15.21 -0.15 -1.89 16 5 C 0.10 0.16 10.07 -19.14 -0.19 -0.03 16 6 C -0.31 -0.38 5.93 -36.02 -0.21 -0.59 16 7 C -0.03 -0.01 3.08 36.00 0.11 0.10 16 8 O -0.53 -0.89 12.88 -35.23 -0.45 -1.35 16 9 Si 0.70 -0.61 30.48 -169.99 -5.18 -5.80 16 10 S 0.12 0.15 21.68 -107.50 -2.33 -2.18 16 11 C 0.15 -0.06 2.59 -67.93 -0.18 -0.23 16 12 H 0.11 0.17 7.12 -51.93 -0.37 -0.19 16 13 C -0.12 0.19 5.20 -26.73 -0.14 0.05 16 14 C -0.15 0.23 5.55 -26.73 -0.15 0.08 16 15 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 16 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 17 O -0.57 -0.28 13.32 -35.23 -0.47 -0.75 16 18 C -0.11 0.04 5.58 -26.70 -0.15 -0.10 16 19 C -0.13 0.14 5.19 -26.70 -0.14 0.01 16 20 H 0.06 -0.19 8.14 -51.93 -0.42 -0.61 16 21 H 0.07 -0.17 7.04 -51.93 -0.37 -0.54 16 22 H 0.08 -0.32 6.43 -51.93 -0.33 -0.65 16 23 H 0.17 -0.09 5.85 -52.49 -0.31 -0.40 16 24 H 0.12 -0.03 7.96 -51.92 -0.41 -0.45 16 25 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 26 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 27 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 28 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.07 -0.16 7.67 -51.93 -0.40 -0.55 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.38 -1.29 9.08 45.56 0.41 -0.87 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 -0.15 6.66 -51.93 -0.35 -0.49 16 36 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 300.49 15.07 4.53 4.53 Total: 0.00 -6.48 300.49 -10.11 -16.59 By element: Atomic # 1 Polarization: -3.73 SS G_CDS: -4.30 Total: -8.03 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: -1.25 Total: -0.60 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -0.65 Total: -2.42 kcal Atomic # 8 Polarization: -1.17 SS G_CDS: -0.92 Total: -2.09 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.18 Total: -5.80 kcal Atomic # 16 Polarization: 0.15 SS G_CDS: -2.33 Total: -2.18 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -6.48 -10.11 -16.59 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9156392_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.001 kcal (2) G-P(sol) polarization free energy of solvation -6.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds