Wall clock time and date at job start Tue Mar 9 2021 13:42:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47225 * 2 1 4 4 C 1.50705 * 109.46934 * 239.99668 * 2 1 3 5 5 C 1.33321 * 125.95202 * 299.98084 * 4 2 1 6 6 N 1.32122 * 114.57616 * 179.75385 * 5 4 2 7 7 C 1.29685 * 116.86583 * 0.46673 * 6 5 4 8 8 N 1.38615 * 124.94804 * 179.81578 * 7 6 5 9 9 C 1.46502 * 119.99590 * 359.42541 * 8 7 6 10 10 H 1.08991 * 112.85333 * 25.32993 * 9 8 7 11 11 C 1.53787 * 113.60938 * 156.52994 * 9 8 7 12 12 C 1.53784 * 87.08143 * 89.11319 * 11 9 8 13 13 H 1.08995 * 113.61013 * 270.87954 * 12 11 9 14 14 C 1.50698 * 113.61261 * 140.06232 * 12 11 9 15 15 C 1.38235 * 119.98756 * 299.72360 * 14 12 11 16 16 C 1.38217 * 120.01074 * 179.77065 * 15 14 12 17 17 C 1.38352 * 119.98792 * 0.52573 * 16 15 14 18 18 Cl 1.73606 * 120.01434 * 179.70401 * 17 16 15 19 19 C 1.38349 * 119.97090 * 359.72891 * 17 16 15 20 20 C 1.38213 * 119.98940 * 359.97438 * 19 17 16 21 21 C 1.53782 * 113.61264 * 254.13010 * 9 8 7 22 22 S 1.70964 * 110.10148 * 359.55055 * 7 6 5 23 23 H 0.96703 * 114.00084 * 59.99816 * 1 2 3 24 24 H 1.08998 * 109.46850 * 119.99889 * 2 1 3 25 25 H 1.48494 * 110.00004 * 298.68050 * 3 2 1 26 26 H 1.48498 * 110.00292 * 60.00269 * 3 2 1 27 27 H 1.07992 * 122.71201 * 359.97438 * 5 4 2 28 28 H 0.96991 * 119.99725 * 179.69805 * 8 7 6 29 29 H 1.09001 * 113.60890 * 203.66376 * 11 9 8 30 30 H 1.08998 * 113.61781 * 334.56104 * 11 9 8 31 31 H 1.07994 * 119.99552 * 0.02562 * 15 14 12 32 32 H 1.07998 * 120.00956 * 180.25741 * 16 15 14 33 33 H 1.08005 * 120.00583 * 179.97438 * 19 17 16 34 34 H 1.08002 * 119.99336 * 180.02562 * 20 19 17 35 35 H 1.09003 * 113.60929 * 25.43667 * 21 9 8 36 36 H 1.08996 * 113.61611 * 156.33740 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6837 -1.9790 -1.5578 6 7 2.2340 -2.3710 -2.6932 7 6 2.9424 -1.4942 -3.3345 8 7 3.5951 -1.7255 -4.5353 9 6 3.5225 -3.0458 -5.1660 10 1 2.6302 -3.6027 -4.8805 11 6 3.7724 -3.0182 -6.6832 12 6 5.2657 -3.1953 -6.3610 13 1 5.7961 -2.2539 -6.2184 14 6 5.9790 -4.1324 -7.3011 15 6 5.5704 -5.4488 -7.4064 16 6 6.2213 -6.3076 -8.2721 17 6 7.2888 -5.8523 -9.0252 18 17 8.1117 -6.9323 -10.1070 19 6 7.7006 -4.5360 -8.9155 20 6 7.0451 -3.6766 -8.0541 21 6 4.8218 -3.8592 -5.0437 22 16 2.9477 -0.0095 -2.4869 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5879 2.4585 -1.2242 26 1 1.5616 2.4679 1.2085 27 1 1.0791 -2.6322 -0.9461 28 1 4.1032 -1.0143 -4.9558 29 1 3.3365 -3.8653 -7.2129 30 1 3.5364 -2.0606 -7.1473 31 1 4.7399 -5.8053 -6.8153 32 1 5.8994 -7.3349 -8.3574 33 1 8.5342 -4.1801 -9.5028 34 1 7.3662 -2.6490 -7.9686 35 1 5.4325 -3.5800 -4.1850 36 1 4.6724 -4.9357 -5.1260 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9610466_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:51 Heat of formation + Delta-G solvation = 66.634365 kcal Electronic energy + Delta-G solvation = -21137.039754 eV Core-core repulsion = 17741.204739 eV Total energy + Delta-G solvation = -3395.835015 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.049 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.54169 -40.58206 -39.40803 -37.96929 -37.36054 -35.28142 -32.17310 -31.89644 -30.96788 -26.98628 -26.81181 -26.13092 -24.57133 -23.90775 -22.79441 -21.30941 -20.16057 -19.57499 -18.43392 -18.09985 -17.16181 -16.92948 -16.48920 -16.38418 -16.25085 -15.87254 -15.67322 -15.23373 -15.00638 -14.81592 -14.64468 -14.46727 -13.88766 -13.79093 -13.66437 -13.35089 -12.88997 -12.68389 -12.56108 -12.37547 -12.14246 -11.98973 -11.84992 -11.76564 -11.38913 -11.12179 -10.91808 -10.25811 -10.20311 -10.09248 -9.55681 -8.77287 -5.07278 -0.05232 0.00720 0.06536 0.23964 0.67618 1.17371 1.23466 1.54281 1.89469 2.01168 2.05351 2.51100 3.27232 3.32891 3.48389 3.54157 3.65648 3.71893 3.81456 3.84174 3.91440 4.04879 4.24063 4.34110 4.48211 4.52947 4.57103 4.63747 4.65794 4.73334 4.79500 4.86765 4.91521 4.94990 5.15882 5.20012 5.22374 5.49345 5.73415 5.82844 6.00702 6.34514 6.99042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.017 4.017 3 Si 0.654 3.346 4 C -0.304 4.304 5 C 0.119 3.881 6 N -0.548 5.548 7 C 0.327 3.673 8 N -0.676 5.676 9 C 0.137 3.863 10 H 0.107 0.893 11 C -0.136 4.136 12 C -0.075 4.075 13 H 0.099 0.901 14 C -0.067 4.067 15 C -0.105 4.105 16 C -0.107 4.107 17 C -0.039 4.039 18 Cl -0.070 7.070 19 C -0.108 4.108 20 C -0.104 4.104 21 C -0.144 4.144 22 S 0.089 5.911 23 H 0.377 0.623 24 H 0.125 0.875 25 H -0.244 1.244 26 H -0.237 1.237 27 H 0.176 0.824 28 H 0.414 0.586 29 H 0.101 0.899 30 H 0.078 0.922 31 H 0.133 0.867 32 H 0.134 0.866 33 H 0.134 0.866 34 H 0.131 0.869 35 H 0.076 0.924 36 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.830 2.232 -0.619 2.952 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.130 4.130 3 Si 0.553 3.447 4 C -0.427 4.427 5 C -0.032 4.032 6 N -0.273 5.273 7 C -0.043 4.043 8 N -0.315 5.315 9 C 0.029 3.971 10 H 0.125 0.875 11 C -0.174 4.174 12 C -0.094 4.094 13 H 0.117 0.883 14 C -0.067 4.067 15 C -0.123 4.123 16 C -0.126 4.126 17 C -0.065 4.065 18 Cl -0.041 7.041 19 C -0.126 4.126 20 C -0.122 4.122 21 C -0.183 4.183 22 S 0.338 5.662 23 H 0.225 0.775 24 H 0.143 0.857 25 H -0.168 1.168 26 H -0.161 1.161 27 H 0.193 0.807 28 H 0.252 0.748 29 H 0.119 0.881 30 H 0.096 0.904 31 H 0.151 0.849 32 H 0.152 0.848 33 H 0.151 0.849 34 H 0.149 0.851 35 H 0.095 0.905 36 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 2.141 2.964 -0.629 3.711 hybrid contribution -1.079 -0.644 -0.427 1.327 sum 1.062 2.321 -1.057 2.762 Atomic orbital electron populations 1.86617 1.17492 1.79899 1.49229 1.24074 0.83464 1.09775 0.95712 0.95219 0.91667 0.75267 0.82566 1.25528 1.13304 0.99196 1.04685 1.21335 0.97152 0.93063 0.91666 1.66478 1.16900 1.33614 1.10333 1.23705 0.94957 0.93438 0.92223 1.43694 1.54502 1.13758 1.19500 1.21880 0.99441 0.83310 0.92508 0.87462 1.23464 0.94779 1.03761 0.95445 1.21677 0.95047 0.98054 0.94572 0.88302 1.19786 0.95711 0.94272 0.96912 1.20990 1.00104 0.92843 0.98322 1.21092 0.94784 1.00780 0.95904 1.21000 0.96917 0.91921 0.96707 1.98394 1.78117 1.64332 1.63251 1.21095 1.00545 0.91672 0.99323 1.21040 0.95428 0.99826 0.95905 1.23663 0.97290 1.00440 0.96956 1.84007 1.51403 1.13459 1.17288 0.77538 0.85699 1.16775 1.16084 0.80683 0.74819 0.88092 0.90360 0.84908 0.84814 0.84858 0.85113 0.90523 0.88539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.48 12.87 -35.23 -0.45 -0.94 16 2 C -0.02 0.01 2.99 36.01 0.11 0.11 16 3 Si 0.65 -0.54 31.05 -169.99 -5.28 -5.82 16 4 C -0.30 -0.11 5.74 -36.02 -0.21 -0.32 16 5 C 0.12 0.18 11.22 -19.14 -0.21 -0.04 16 6 N -0.55 -1.31 9.85 -15.21 -0.15 -1.46 16 7 C 0.33 0.20 8.09 -87.68 -0.71 -0.51 16 8 N -0.68 1.12 5.42 -54.99 -0.30 0.82 16 9 C 0.14 -0.26 4.42 -67.11 -0.30 -0.56 16 10 H 0.11 -0.03 7.69 -51.93 -0.40 -0.43 16 11 C -0.14 0.42 7.29 -25.91 -0.19 0.23 16 12 C -0.08 0.22 3.86 -90.82 -0.35 -0.13 16 13 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 14 C -0.07 0.09 5.29 -104.62 -0.55 -0.47 16 15 C -0.10 0.11 8.63 -39.59 -0.34 -0.23 16 16 C -0.11 0.00 9.83 -39.55 -0.39 -0.39 16 17 C -0.04 -0.03 6.32 -39.50 -0.25 -0.28 16 18 Cl -0.07 -0.10 28.96 -51.86 -1.50 -1.60 16 19 C -0.11 0.00 9.83 -39.55 -0.39 -0.39 16 20 C -0.10 0.10 9.71 -39.59 -0.38 -0.28 16 21 C -0.14 0.32 7.27 -25.78 -0.19 0.13 16 22 S 0.09 -0.04 20.57 -107.50 -2.21 -2.25 16 23 H 0.38 -0.63 8.70 45.56 0.40 -0.24 16 24 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 25 H -0.24 -0.26 7.11 56.52 0.40 0.14 16 26 H -0.24 -0.45 7.11 56.52 0.40 -0.05 16 27 H 0.18 0.08 8.06 -52.49 -0.42 -0.34 16 28 H 0.41 -1.54 8.83 -40.82 -0.36 -1.90 16 29 H 0.10 -0.31 7.73 -51.93 -0.40 -0.72 16 30 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.13 -0.36 6.65 -52.49 -0.35 -0.71 16 32 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 33 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 34 H 0.13 -0.37 8.05 -52.49 -0.42 -0.79 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.10 -0.24 6.31 -51.93 -0.33 -0.56 16 LS Contribution 333.90 15.07 5.03 5.03 Total: 0.00 -5.40 333.90 -13.22 -18.63 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -4.01 Total: -9.30 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -4.35 Total: -3.11 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -0.45 Total: -0.64 kcal Atomic # 8 Polarization: -0.48 SS G_CDS: -0.45 Total: -0.94 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.28 Total: -5.82 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.21 Total: -2.25 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.50 Total: -1.60 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -5.40 -13.22 -18.63 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9610466_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.262 kcal (2) G-P(sol) polarization free energy of solvation -5.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.628 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds