Wall clock time and date at job start Tue Mar 9 2021 13:42:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33332 * 125.94954 * 2 1 4 4 C 1.50699 * 122.71213 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.46763 * 330.00371 * 4 3 2 6 6 Si 1.86301 * 109.47112 * 210.00203 * 4 3 2 7 7 N 1.32115 * 114.57580 * 180.02562 * 3 2 1 8 8 C 1.29688 * 116.87094 * 359.97438 * 7 3 2 9 9 N 1.38609 * 124.95101 * 179.97438 * 8 7 3 10 10 C 1.46501 * 119.99947 * 179.97438 * 9 8 7 11 11 H 1.09000 * 112.84825 * 25.34156 * 10 9 8 12 12 C 1.53782 * 113.61577 * 156.53432 * 10 9 8 13 13 C 1.53781 * 87.08056 * 89.11688 * 12 10 9 14 14 H 1.08998 * 113.61351 * 270.80071 * 13 12 10 15 15 C 1.50694 * 113.61058 * 139.98154 * 13 12 10 16 16 C 1.38240 * 119.99130 * 299.72328 * 15 13 12 17 17 C 1.38219 * 120.01487 * 179.76716 * 16 15 13 18 18 C 1.38344 * 119.98446 * 0.48931 * 17 16 15 19 19 Cl 1.73603 * 120.01311 * 179.74511 * 18 17 16 20 20 C 1.38350 * 119.97965 * 359.76851 * 18 17 16 21 21 C 1.38217 * 119.98307 * 359.97438 * 20 18 17 22 22 C 1.53783 * 113.61858 * 254.13990 * 10 9 8 23 23 S 1.70966 * 110.09929 * 359.73162 * 8 7 3 24 24 H 1.09002 * 109.47152 * 90.00172 * 1 2 3 25 25 H 1.09001 * 109.46980 * 330.00272 * 1 2 3 26 26 H 1.09004 * 109.47113 * 210.00253 * 1 2 3 27 27 H 1.08995 * 109.47264 * 89.99891 * 4 3 2 28 28 H 0.96699 * 114.00321 * 299.99423 * 5 4 3 29 29 H 1.48498 * 109.99673 * 58.68137 * 6 4 3 30 30 H 1.48498 * 109.99728 * 179.97438 * 6 4 3 31 31 H 0.96999 * 120.00058 * 0.02562 * 9 8 7 32 32 H 1.08997 * 113.61341 * 203.67025 * 12 10 9 33 33 H 1.09007 * 113.60965 * 334.57119 * 12 10 9 34 34 H 1.08000 * 119.99271 * 0.02562 * 16 15 13 35 35 H 1.07995 * 120.00747 * 180.25423 * 17 16 15 36 36 H 1.07996 * 120.01252 * 179.97438 * 20 18 17 37 37 H 1.08001 * 119.99499 * 180.02562 * 21 20 18 38 38 H 1.09004 * 113.61055 * 25.43541 * 22 10 9 39 39 H 1.09001 * 113.61518 * 156.33068 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7414 2.4831 0.0006 5 8 0.4810 2.5022 -0.6725 6 14 2.9320 3.6152 -0.8779 7 7 3.5850 0.8188 -0.0005 8 6 3.9315 -0.4309 -0.0005 9 7 5.2385 -0.8925 -0.0015 10 6 5.5066 -2.3328 -0.0007 11 1 4.6911 -2.9153 -0.4294 12 6 6.8894 -2.7023 -0.5630 13 6 7.4262 -2.5476 0.8698 14 1 7.7529 -1.5351 1.1068 15 6 8.4415 -3.5942 1.2502 16 6 8.0927 -4.9318 1.2385 17 6 9.0249 -5.8925 1.5827 18 6 10.3044 -5.5145 1.9488 19 17 11.4739 -6.7201 2.3876 20 6 10.6515 -4.1754 1.9655 21 6 9.7199 -3.2160 1.6160 22 6 5.9993 -2.8671 1.3545 23 16 2.5413 -1.4260 0.0078 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 0.8900 0.5138 26 1 -0.3633 -0.8900 0.5139 27 1 1.6096 2.8212 1.0283 28 1 0.5229 2.2127 -1.5942 29 1 3.1447 3.1464 -2.2707 30 1 2.4024 5.0025 -0.8847 31 1 5.9756 -0.2620 -0.0019 32 1 6.9478 -3.7220 -0.9435 33 1 7.2882 -1.9656 -1.2605 34 1 7.0927 -5.2266 0.9564 35 1 8.7534 -6.9377 1.5696 36 1 11.6500 -3.8797 2.2515 37 1 9.9908 -2.1706 1.6285 38 1 5.6798 -2.2634 2.2040 39 1 5.8147 -3.9318 1.4974 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9610466_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:54 Heat of formation + Delta-G solvation = 62.318606 kcal Electronic energy + Delta-G solvation = -23188.553233 eV Core-core repulsion = 19636.993453 eV Total energy + Delta-G solvation = -3551.559780 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.064 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.60420 -40.93779 -39.58587 -37.85172 -37.37845 -35.37896 -32.72346 -32.19109 -31.49824 -29.18567 -27.00889 -26.35130 -25.54315 -24.40261 -23.92869 -22.85886 -20.86530 -20.46295 -18.88564 -18.47405 -17.96751 -17.48749 -16.93117 -16.68155 -16.43369 -16.32119 -15.68684 -15.63198 -15.28067 -14.94210 -14.72265 -14.52115 -14.20430 -14.14265 -13.77546 -13.76446 -13.64983 -13.47904 -13.28050 -12.81818 -12.69690 -12.57909 -12.31888 -12.14588 -11.88811 -11.80592 -11.75988 -11.48783 -11.09126 -10.60984 -10.44022 -10.12445 -10.01120 -9.59282 -8.64928 -4.67192 0.00038 0.03531 0.16682 0.20780 0.78090 1.14882 1.38572 1.77128 1.83001 1.95474 2.11624 2.47245 3.14512 3.28570 3.35073 3.43803 3.52520 3.62815 3.72883 3.80769 3.96851 4.12820 4.18433 4.23274 4.30061 4.34812 4.45667 4.52213 4.58407 4.61381 4.70360 4.75269 4.77354 4.85462 4.87816 4.92344 5.11314 5.14463 5.17547 5.29937 5.44395 5.59468 5.70133 6.21480 6.37842 6.93539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 C -0.241 4.241 3 C 0.068 3.932 4 C -0.042 4.042 5 O -0.526 6.526 6 Si 0.721 3.279 7 N -0.538 5.538 8 C 0.322 3.678 9 N -0.676 5.676 10 C 0.125 3.875 11 H 0.097 0.903 12 C -0.132 4.132 13 C -0.073 4.073 14 H 0.102 0.898 15 C -0.068 4.068 16 C -0.105 4.105 17 C -0.107 4.107 18 C -0.038 4.038 19 Cl -0.069 7.069 20 C -0.107 4.107 21 C -0.102 4.102 22 C -0.148 4.148 23 S 0.102 5.898 24 H 0.068 0.932 25 H 0.092 0.908 26 H 0.060 0.940 27 H 0.124 0.876 28 H 0.376 0.624 29 H -0.268 1.268 30 H -0.261 1.261 31 H 0.414 0.586 32 H 0.103 0.897 33 H 0.082 0.918 34 H 0.133 0.867 35 H 0.134 0.866 36 H 0.134 0.866 37 H 0.132 0.868 38 H 0.081 0.919 39 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.861 -1.787 -0.201 1.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.364 4.364 3 C -0.062 4.062 4 C -0.155 4.155 5 O -0.331 6.331 6 Si 0.622 3.378 7 N -0.264 5.264 8 C -0.049 4.049 9 N -0.316 5.316 10 C 0.018 3.982 11 H 0.115 0.885 12 C -0.170 4.170 13 C -0.091 4.091 14 H 0.121 0.879 15 C -0.068 4.068 16 C -0.123 4.123 17 C -0.126 4.126 18 C -0.065 4.065 19 Cl -0.040 7.040 20 C -0.126 4.126 21 C -0.121 4.121 22 C -0.187 4.187 23 S 0.351 5.649 24 H 0.087 0.913 25 H 0.110 0.890 26 H 0.079 0.921 27 H 0.142 0.858 28 H 0.224 0.776 29 H -0.193 1.193 30 H -0.186 1.186 31 H 0.253 0.747 32 H 0.121 0.879 33 H 0.101 0.899 34 H 0.150 0.850 35 H 0.152 0.848 36 H 0.152 0.848 37 H 0.150 0.850 38 H 0.099 0.901 39 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 1.149 -2.008 -0.258 2.328 hybrid contribution -0.451 0.216 -0.536 0.733 sum 0.699 -1.793 -0.794 2.081 Atomic orbital electron populations 1.20214 0.86479 1.03261 1.02596 1.25151 1.01358 0.92868 1.17009 1.20086 0.86799 0.97124 1.02198 1.24461 0.91939 0.95383 1.03679 1.86606 1.28512 1.89127 1.28884 0.93655 0.86175 0.76407 0.81607 1.65717 1.17059 1.16440 1.27208 1.23237 0.91671 0.91452 0.98588 1.43560 1.01845 1.06127 1.80101 1.21971 0.98524 0.79944 0.97743 0.88505 1.23423 0.93707 1.03610 0.96255 1.21638 0.92991 0.98037 0.96416 0.87943 1.19764 0.94435 0.94068 0.98512 1.20974 0.99506 0.91958 0.99891 1.21084 0.91513 1.00670 0.99308 1.21005 0.91445 0.90315 1.03724 1.98397 1.58329 1.55947 1.91361 1.21107 1.00649 0.90841 0.99996 1.21056 0.92555 0.99631 0.98815 1.23740 0.94653 1.02569 0.97788 1.83981 0.96449 1.10503 1.73994 0.91308 0.88967 0.92119 0.85798 0.77647 1.19265 1.18647 0.74730 0.87869 0.89903 0.84963 0.84805 0.84815 0.85026 0.90079 0.88236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.00 8.95 36.01 0.32 0.32 16 2 C -0.24 -0.36 6.50 -36.02 -0.23 -0.60 16 3 C 0.07 0.14 5.92 -84.18 -0.50 -0.36 16 4 C -0.04 -0.04 2.83 36.01 0.10 0.06 16 5 O -0.53 -0.50 9.89 -35.23 -0.35 -0.85 16 6 Si 0.72 0.79 32.08 -169.99 -5.45 -4.66 16 7 N -0.54 -1.20 8.95 -11.36 -0.10 -1.30 16 8 C 0.32 0.29 8.24 -87.68 -0.72 -0.44 16 9 N -0.68 1.11 5.42 -54.99 -0.30 0.81 16 10 C 0.12 -0.40 4.28 -67.12 -0.29 -0.69 16 11 H 0.10 -0.31 7.11 -51.93 -0.37 -0.68 16 12 C -0.13 0.52 7.29 -25.92 -0.19 0.33 16 13 C -0.07 0.25 3.87 -90.82 -0.35 -0.10 16 14 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 15 C -0.07 0.13 5.29 -104.62 -0.55 -0.42 16 16 C -0.11 0.19 8.62 -39.59 -0.34 -0.15 16 17 C -0.11 0.06 9.83 -39.55 -0.39 -0.32 16 18 C -0.04 -0.02 6.32 -39.50 -0.25 -0.27 16 19 Cl -0.07 -0.08 28.96 -51.86 -1.50 -1.58 16 20 C -0.11 0.04 9.83 -39.55 -0.39 -0.35 16 21 C -0.10 0.14 9.71 -39.58 -0.38 -0.24 16 22 C -0.15 0.51 7.27 -25.78 -0.19 0.32 16 23 S 0.10 0.04 21.71 -107.50 -2.33 -2.29 16 24 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.09 0.06 6.61 -51.93 -0.34 -0.29 16 26 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.12 0.03 7.96 -51.93 -0.41 -0.38 16 28 H 0.38 -0.50 8.68 45.56 0.40 -0.11 16 29 H -0.27 -1.04 7.11 56.52 0.40 -0.64 16 30 H -0.26 -0.89 7.11 56.52 0.40 -0.49 16 31 H 0.41 -1.04 8.83 -40.82 -0.36 -1.40 16 32 H 0.10 -0.45 7.73 -51.93 -0.40 -0.85 16 33 H 0.08 -0.32 8.14 -51.92 -0.42 -0.74 16 34 H 0.13 -0.50 6.64 -52.49 -0.35 -0.85 16 35 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 36 H 0.13 -0.18 8.06 -52.49 -0.42 -0.61 16 37 H 0.13 -0.40 8.05 -52.49 -0.42 -0.83 16 38 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 39 H 0.10 -0.41 6.30 -51.93 -0.33 -0.73 16 LS Contribution 350.67 15.07 5.28 5.28 Total: 0.00 -5.24 350.67 -13.85 -19.09 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -4.75 Total: -11.58 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -4.35 Total: -2.91 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.40 Total: -0.49 kcal Atomic # 8 Polarization: -0.50 SS G_CDS: -0.35 Total: -0.85 kcal Atomic # 14 Polarization: 0.79 SS G_CDS: -5.45 Total: -4.66 kcal Atomic # 16 Polarization: 0.04 SS G_CDS: -2.33 Total: -2.29 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.50 Total: -1.58 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -5.24 -13.85 -19.09 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9610466_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.409 kcal (2) G-P(sol) polarization free energy of solvation -5.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.851 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.091 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.319 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds