Wall clock time and date at job start Tue Mar 9 2021 13:42:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47116 * 2 1 4 4 C 1.50701 * 109.47011 * 119.99935 * 2 1 3 5 5 C 1.37987 * 120.32549 * 244.97734 * 4 2 1 6 6 N 1.32005 * 120.89802 * 179.75003 * 5 4 2 7 7 C 1.32342 * 121.64594 * 0.56136 * 6 5 4 8 8 N 1.39142 * 119.71598 * 179.71495 * 7 6 5 9 9 C 1.46504 * 120.00236 * 359.72868 * 8 7 6 10 10 H 1.09005 * 112.84724 * 336.19579 * 9 8 7 11 11 C 1.54049 * 113.68747 * 107.46867 * 9 8 7 12 12 C 1.53786 * 86.98426 * 89.12986 * 11 9 8 13 13 H 1.09002 * 113.61357 * 270.83585 * 12 11 9 14 14 C 1.50697 * 113.61519 * 140.01979 * 12 11 9 15 15 C 1.38246 * 119.98490 * 320.58211 * 14 12 11 16 16 C 1.38220 * 120.01051 * 179.76805 * 15 14 12 17 17 C 1.38353 * 119.98579 * 0.48987 * 16 15 14 18 18 Cl 1.73594 * 120.01147 * 179.74491 * 17 16 15 19 19 C 1.38350 * 119.97432 * 359.76819 * 17 16 15 20 20 C 1.38216 * 119.98658 * 359.97438 * 19 17 16 21 21 C 1.53781 * 87.17350 * 25.42668 * 12 11 9 22 22 C 1.39334 * 120.56363 * 359.43888 * 7 6 5 23 23 F 1.35108 * 120.47264 * 180.25006 * 22 7 6 24 24 C 1.38449 * 119.05782 * 0.27654 * 22 7 6 25 25 H 0.96701 * 114.00164 * 59.99743 * 1 2 3 26 26 H 1.08997 * 109.47394 * 240.00041 * 2 1 3 27 27 H 1.48498 * 109.99815 * 60.00114 * 3 2 1 28 28 H 1.48505 * 110.00084 * 181.31849 * 3 2 1 29 29 H 1.07997 * 119.54793 * 0.02562 * 5 4 2 30 30 H 0.97002 * 119.99961 * 179.72661 * 8 7 6 31 31 H 1.08992 * 113.69868 * 334.61096 * 11 9 8 32 32 H 1.09000 * 113.61076 * 203.62855 * 11 9 8 33 33 H 1.07997 * 119.99773 * 0.02855 * 15 14 12 34 34 H 1.07999 * 120.00597 * 180.25442 * 16 15 14 35 35 H 1.07994 * 120.00649 * 180.02562 * 19 17 16 36 36 H 1.07996 * 119.99090 * 180.02562 * 20 19 17 37 37 H 1.08999 * 113.61567 * 89.07405 * 21 12 11 38 38 H 1.08998 * 113.61196 * 219.97759 * 21 12 11 39 39 H 1.07996 * 120.75567 * 179.97438 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6385 -0.0202 2.1936 6 7 3.0795 -0.6301 3.2780 7 6 2.8732 -1.9215 3.4808 8 7 3.3612 -2.5249 4.6358 9 6 4.1049 -1.7323 5.6182 10 1 4.5633 -0.8432 5.1851 11 6 3.3168 -1.4526 6.9120 12 6 3.8977 -2.7693 7.4541 13 1 3.2867 -3.6427 7.2261 14 6 4.3004 -2.6994 8.9046 15 6 4.9093 -1.5608 9.3985 16 6 5.2745 -1.4943 10.7299 17 6 5.0400 -2.5714 11.5659 18 17 5.5045 -2.4912 13.2366 19 6 4.4355 -3.7127 11.0698 20 6 4.0659 -3.7760 9.7395 21 6 5.0692 -2.5655 6.4790 22 6 2.1667 -2.6808 2.5504 23 9 1.9529 -3.9980 2.7617 24 6 1.6873 -2.0665 1.4060 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5138 -0.8899 27 1 1.5614 2.4678 1.2085 28 1 3.5346 1.7703 -0.0321 29 1 2.8299 1.0343 2.0603 30 1 3.2090 -3.4703 4.7905 31 1 2.2352 -1.4744 6.7794 32 1 3.6607 -0.5694 7.4503 33 1 5.0957 -0.7214 8.7450 34 1 5.7464 -0.6031 11.1167 35 1 4.2518 -4.5536 11.7220 36 1 3.5936 -4.6667 9.3522 37 1 5.8912 -1.9859 6.8990 38 1 5.4012 -3.4851 5.9971 39 1 1.1367 -2.6289 0.6666 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9610466_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:57 Heat of formation + Delta-G solvation = 16.800740 kcal Electronic energy + Delta-G solvation = -25042.521667 eV Core-core repulsion = 21085.919482 eV Total energy + Delta-G solvation = -3956.602185 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.083 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -49.90067 -41.69831 -41.07161 -39.43353 -37.91673 -37.34468 -35.55998 -33.29810 -32.19148 -32.05986 -30.84645 -26.92000 -26.77240 -26.06663 -24.83976 -23.89504 -22.88830 -22.50792 -20.31604 -19.53719 -18.58634 -18.37907 -18.10759 -18.02239 -16.92141 -16.86010 -16.71506 -16.29855 -16.12635 -15.49553 -15.49306 -15.06824 -14.97403 -14.72961 -14.60971 -14.45229 -14.37583 -13.98781 -13.96314 -13.70424 -13.60880 -13.26076 -12.67867 -12.61776 -12.49316 -12.11743 -12.06674 -11.83656 -11.75007 -11.36175 -11.19687 -10.76922 -10.70028 -10.35928 -10.07521 -9.53798 -8.81348 -5.05989 -0.12041 0.07372 0.09855 0.25653 1.18626 1.18778 1.57483 1.85314 1.88207 2.47344 2.53394 3.00623 3.13488 3.29071 3.37244 3.55281 3.58127 3.62465 3.74871 3.80012 3.84975 3.85903 4.01199 4.08089 4.22541 4.26070 4.35712 4.44081 4.53438 4.59844 4.62562 4.66574 4.72363 4.83641 4.90135 4.94224 4.96052 5.02791 5.19633 5.21909 5.37519 5.52070 5.75202 5.92124 6.12151 6.54693 6.89991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.681 3.319 4 C -0.162 4.162 5 C 0.143 3.857 6 N -0.509 5.509 7 C 0.392 3.608 8 N -0.699 5.699 9 C 0.133 3.867 10 H 0.109 0.891 11 C -0.145 4.145 12 C -0.075 4.075 13 H 0.098 0.902 14 C -0.066 4.066 15 C -0.105 4.105 16 C -0.107 4.107 17 C -0.039 4.039 18 Cl -0.070 7.070 19 C -0.107 4.107 20 C -0.104 4.104 21 C -0.137 4.137 22 C -0.017 4.017 23 F -0.132 7.132 24 C -0.035 4.035 25 H 0.384 0.616 26 H 0.076 0.924 27 H -0.247 1.247 28 H -0.251 1.251 29 H 0.155 0.845 30 H 0.413 0.587 31 H 0.074 0.926 32 H 0.096 0.904 33 H 0.133 0.867 34 H 0.134 0.866 35 H 0.134 0.866 36 H 0.131 0.869 37 H 0.100 0.900 38 H 0.077 0.923 39 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.296 1.565 -5.104 5.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.171 4.171 3 Si 0.582 3.418 4 C -0.167 4.167 5 C -0.014 4.014 6 N -0.226 5.226 7 C 0.154 3.846 8 N -0.331 5.331 9 C 0.027 3.973 10 H 0.127 0.873 11 C -0.184 4.184 12 C -0.094 4.094 13 H 0.116 0.884 14 C -0.066 4.066 15 C -0.123 4.123 16 C -0.126 4.126 17 C -0.066 4.066 18 Cl -0.041 7.041 19 C -0.126 4.126 20 C -0.122 4.122 21 C -0.175 4.175 22 C -0.044 4.044 23 F -0.111 7.111 24 C -0.061 4.061 25 H 0.232 0.768 26 H 0.094 0.906 27 H -0.171 1.171 28 H -0.176 1.176 29 H 0.172 0.828 30 H 0.250 0.750 31 H 0.093 0.907 32 H 0.114 0.886 33 H 0.151 0.849 34 H 0.152 0.848 35 H 0.152 0.848 36 H 0.149 0.851 37 H 0.118 0.882 38 H 0.096 0.904 39 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.886 2.388 -3.199 4.089 hybrid contribution -0.541 -1.734 -0.081 1.818 sum 0.345 0.654 -3.280 3.362 Atomic orbital electron populations 1.86498 1.17175 1.81850 1.49807 1.24469 0.85766 1.10279 0.96568 0.95068 0.81006 0.77963 0.87742 1.19934 1.04501 0.93915 0.98395 1.22168 0.92659 0.98948 0.87641 1.67264 1.25125 1.07381 1.22808 1.18367 0.90547 0.88861 0.86842 1.44204 1.58954 1.11714 1.18277 1.21872 0.92395 0.95350 0.87725 0.87290 1.23655 1.01160 0.97175 0.96388 1.21627 0.98041 0.99506 0.90201 0.88360 1.19802 0.97672 0.93870 0.95263 1.20981 0.98494 0.98122 0.94676 1.21085 1.00290 0.97888 0.93300 1.20992 1.02746 0.96681 0.86151 1.98392 1.90903 1.98478 1.16330 1.21093 0.98397 0.97067 0.96051 1.21048 0.99850 0.98656 0.92660 1.23466 0.96802 1.01165 0.96105 1.17963 1.08455 0.79586 0.98363 1.91498 1.93646 1.31045 1.94895 1.21272 0.95240 0.94329 0.95252 0.76843 0.90579 1.17132 1.17555 0.82822 0.74955 0.90683 0.88588 0.84944 0.84813 0.84850 0.85122 0.88165 0.90418 0.83071 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.40 12.82 -35.23 -0.45 -0.05 16 2 C -0.06 0.07 2.81 36.01 0.10 0.17 16 3 Si 0.68 -1.48 29.88 -169.99 -5.08 -6.56 16 4 C -0.16 -0.26 5.39 -104.47 -0.56 -0.82 16 5 C 0.14 0.34 9.84 -17.57 -0.17 0.17 16 6 N -0.51 -1.64 9.13 -12.37 -0.11 -1.75 16 7 C 0.39 0.98 7.49 -154.86 -1.16 -0.18 16 8 N -0.70 -0.27 5.42 -52.92 -0.29 -0.56 16 9 C 0.13 -0.08 4.35 -66.97 -0.29 -0.37 16 10 H 0.11 0.05 7.41 -51.93 -0.38 -0.34 16 11 C -0.14 0.13 7.28 -25.77 -0.19 -0.05 16 12 C -0.08 0.12 3.85 -90.96 -0.35 -0.23 16 13 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 14 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 15 C -0.10 0.04 8.53 -39.58 -0.34 -0.30 16 16 C -0.11 -0.06 9.83 -39.55 -0.39 -0.45 16 17 C -0.04 -0.06 6.32 -39.50 -0.25 -0.31 16 18 Cl -0.07 -0.13 28.96 -51.86 -1.50 -1.64 16 19 C -0.11 -0.08 9.83 -39.55 -0.39 -0.47 16 20 C -0.10 0.01 9.71 -39.59 -0.38 -0.38 16 21 C -0.14 0.25 7.29 -25.92 -0.19 0.07 16 22 C -0.02 -0.04 7.35 -39.10 -0.29 -0.33 16 23 F -0.13 -0.33 16.65 2.25 0.04 -0.29 16 24 C -0.03 -0.06 9.82 -39.26 -0.39 -0.44 16 25 H 0.38 -2.20 8.74 45.56 0.40 -1.81 16 26 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 27 H -0.25 -0.22 7.05 56.52 0.40 0.18 16 28 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 29 H 0.16 0.20 4.87 -52.49 -0.26 -0.06 16 30 H 0.41 -0.34 8.18 -40.82 -0.33 -0.68 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 32 H 0.10 -0.14 6.41 -51.93 -0.33 -0.47 16 33 H 0.13 -0.27 6.73 -52.49 -0.35 -0.63 16 34 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 35 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 36 H 0.13 -0.23 8.05 -52.49 -0.42 -0.65 16 37 H 0.10 -0.22 7.62 -51.93 -0.40 -0.62 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.15 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 346.48 15.07 5.22 5.22 Total: 0.00 -6.21 346.48 -12.19 -18.40 By element: Atomic # 1 Polarization: -4.09 SS G_CDS: -4.23 Total: -8.32 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -5.79 Total: -4.46 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.40 Total: -2.31 kcal Atomic # 8 Polarization: 0.40 SS G_CDS: -0.45 Total: -0.05 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.08 Total: -6.56 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -1.50 Total: -1.64 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -6.21 -12.19 -18.40 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9610466_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.196 kcal (2) G-P(sol) polarization free energy of solvation -6.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.396 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds