Wall clock time and date at job start Tue Mar 9 2021 13:42:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47116 * 2 1 4 4 C 1.50701 * 109.47011 * 119.99935 * 2 1 3 5 5 C 1.37987 * 120.32549 * 244.97734 * 4 2 1 6 6 N 1.32005 * 120.89802 * 179.75003 * 5 4 2 7 7 C 1.32342 * 121.64594 * 0.56136 * 6 5 4 8 8 N 1.39142 * 119.71598 * 179.71495 * 7 6 5 9 9 C 1.46504 * 120.00236 * 359.72868 * 8 7 6 10 10 H 1.09005 * 112.84724 * 336.19579 * 9 8 7 11 11 C 1.54049 * 113.68747 * 107.46867 * 9 8 7 12 12 C 1.53786 * 86.98426 * 89.12986 * 11 9 8 13 13 H 1.09002 * 113.61357 * 270.83585 * 12 11 9 14 14 C 1.50697 * 113.61519 * 140.01979 * 12 11 9 15 15 C 1.38246 * 119.98490 * 320.58211 * 14 12 11 16 16 C 1.38220 * 120.01051 * 179.76805 * 15 14 12 17 17 C 1.38353 * 119.98579 * 0.48987 * 16 15 14 18 18 Cl 1.73594 * 120.01147 * 179.74491 * 17 16 15 19 19 C 1.38350 * 119.97432 * 359.76819 * 17 16 15 20 20 C 1.38216 * 119.98658 * 359.97438 * 19 17 16 21 21 C 1.53781 * 87.17350 * 25.42668 * 12 11 9 22 22 C 1.39334 * 120.56363 * 359.43888 * 7 6 5 23 23 F 1.35108 * 120.47264 * 180.25006 * 22 7 6 24 24 C 1.38449 * 119.05782 * 0.27654 * 22 7 6 25 25 H 0.96701 * 114.00164 * 59.99743 * 1 2 3 26 26 H 1.08997 * 109.47394 * 240.00041 * 2 1 3 27 27 H 1.48498 * 109.99815 * 60.00114 * 3 2 1 28 28 H 1.48505 * 110.00084 * 181.31849 * 3 2 1 29 29 H 1.07997 * 119.54793 * 0.02562 * 5 4 2 30 30 H 0.97002 * 119.99961 * 179.72661 * 8 7 6 31 31 H 1.08992 * 113.69868 * 334.61096 * 11 9 8 32 32 H 1.09000 * 113.61076 * 203.62855 * 11 9 8 33 33 H 1.07997 * 119.99773 * 0.02855 * 15 14 12 34 34 H 1.07999 * 120.00597 * 180.25442 * 16 15 14 35 35 H 1.07994 * 120.00649 * 180.02562 * 19 17 16 36 36 H 1.07996 * 119.99090 * 180.02562 * 20 19 17 37 37 H 1.08999 * 113.61567 * 89.07405 * 21 12 11 38 38 H 1.08998 * 113.61196 * 219.97759 * 21 12 11 39 39 H 1.07996 * 120.75567 * 179.97438 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6385 -0.0202 2.1936 6 7 3.0795 -0.6301 3.2780 7 6 2.8732 -1.9215 3.4808 8 7 3.3612 -2.5249 4.6358 9 6 4.1049 -1.7323 5.6182 10 1 4.5633 -0.8432 5.1851 11 6 3.3168 -1.4526 6.9120 12 6 3.8977 -2.7693 7.4541 13 1 3.2867 -3.6427 7.2261 14 6 4.3004 -2.6994 8.9046 15 6 4.9093 -1.5608 9.3985 16 6 5.2745 -1.4943 10.7299 17 6 5.0400 -2.5714 11.5659 18 17 5.5045 -2.4912 13.2366 19 6 4.4355 -3.7127 11.0698 20 6 4.0659 -3.7760 9.7395 21 6 5.0692 -2.5655 6.4790 22 6 2.1667 -2.6808 2.5504 23 9 1.9529 -3.9980 2.7617 24 6 1.6873 -2.0665 1.4060 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5138 -0.8899 27 1 1.5614 2.4678 1.2085 28 1 3.5346 1.7703 -0.0321 29 1 2.8299 1.0343 2.0603 30 1 3.2090 -3.4703 4.7905 31 1 2.2352 -1.4744 6.7794 32 1 3.6607 -0.5694 7.4503 33 1 5.0957 -0.7214 8.7450 34 1 5.7464 -0.6031 11.1167 35 1 4.2518 -4.5536 11.7220 36 1 3.5936 -4.6667 9.3522 37 1 5.8912 -1.9859 6.8990 38 1 5.4012 -3.4851 5.9971 39 1 1.1367 -2.6289 0.6666 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_9610466_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:56 Heat of formation + Delta-G solvation = 23.133101 kcal Electronic energy + Delta-G solvation = -25042.247075 eV Core-core repulsion = 21085.919482 eV Total energy + Delta-G solvation = -3956.327594 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.083 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -50.05927 -41.73621 -41.08765 -39.42061 -37.83990 -37.40754 -35.57946 -33.39899 -32.19158 -32.06087 -30.86789 -26.88637 -26.71007 -26.07960 -24.90768 -23.87893 -22.94363 -22.50499 -20.28626 -19.60166 -18.55290 -18.35974 -18.13639 -18.10518 -17.03651 -16.87379 -16.71038 -16.29101 -16.14278 -15.48947 -15.45997 -15.10618 -14.97790 -14.75220 -14.62599 -14.43044 -14.39362 -14.07399 -13.97260 -13.71783 -13.51558 -13.25045 -12.68633 -12.61435 -12.48940 -12.11846 -12.03959 -11.84080 -11.76409 -11.31353 -11.20933 -10.86763 -10.82370 -10.24297 -10.06148 -9.55158 -8.88580 -4.91376 -0.25959 -0.01499 0.07625 0.27170 1.12344 1.32257 1.69480 1.82299 1.99350 2.36309 2.54252 2.89249 3.06520 3.33290 3.42223 3.60376 3.62465 3.65705 3.74939 3.80656 3.90177 3.92186 4.03771 4.15581 4.29114 4.31445 4.36745 4.40182 4.58222 4.60355 4.68266 4.72536 4.77839 4.87372 4.89895 4.96526 5.01050 5.08464 5.21312 5.22535 5.33454 5.55791 5.78719 5.88667 6.07057 6.81393 6.94910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.065 4.065 3 Si 0.771 3.229 4 C -0.170 4.170 5 C 0.128 3.872 6 N -0.527 5.527 7 C 0.382 3.618 8 N -0.694 5.694 9 C 0.130 3.870 10 H 0.098 0.902 11 C -0.142 4.142 12 C -0.068 4.068 13 H 0.105 0.895 14 C -0.068 4.068 15 C -0.107 4.107 16 C -0.116 4.116 17 C -0.055 4.055 18 Cl -0.081 7.081 19 C -0.118 4.118 20 C -0.109 4.109 21 C -0.127 4.127 22 C -0.029 4.029 23 F -0.134 7.134 24 C -0.037 4.037 25 H 0.405 0.595 26 H 0.100 0.900 27 H -0.292 1.292 28 H -0.284 1.284 29 H 0.157 0.843 30 H 0.418 0.582 31 H 0.061 0.939 32 H 0.102 0.898 33 H 0.149 0.851 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.147 0.853 37 H 0.107 0.893 38 H 0.082 0.918 39 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.540 1.333 -6.251 6.415 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.176 4.176 3 Si 0.677 3.323 4 C -0.176 4.176 5 C -0.029 4.029 6 N -0.244 5.244 7 C 0.143 3.857 8 N -0.327 5.327 9 C 0.024 3.976 10 H 0.116 0.884 11 C -0.181 4.181 12 C -0.086 4.086 13 H 0.123 0.877 14 C -0.068 4.068 15 C -0.125 4.125 16 C -0.135 4.135 17 C -0.082 4.082 18 Cl -0.052 7.052 19 C -0.136 4.136 20 C -0.127 4.127 21 C -0.165 4.165 22 C -0.056 4.056 23 F -0.113 7.113 24 C -0.063 4.063 25 H 0.257 0.743 26 H 0.118 0.882 27 H -0.220 1.220 28 H -0.211 1.211 29 H 0.174 0.826 30 H 0.257 0.743 31 H 0.080 0.920 32 H 0.120 0.880 33 H 0.166 0.834 34 H 0.159 0.841 35 H 0.158 0.842 36 H 0.165 0.835 37 H 0.125 0.875 38 H 0.100 0.900 39 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.625 2.142 -4.370 4.907 hybrid contribution -0.479 -1.628 0.277 1.719 sum 0.146 0.514 -4.093 4.128 Atomic orbital electron populations 1.86443 1.17148 1.82450 1.51542 1.24609 0.85936 1.10847 0.96166 0.94136 0.77653 0.75399 0.85140 1.20264 1.04045 0.94095 0.99158 1.22377 0.93206 0.99312 0.88005 1.67249 1.25861 1.07868 1.23431 1.18527 0.90807 0.88818 0.87515 1.44252 1.58614 1.12001 1.17845 1.21895 0.92808 0.95293 0.87581 0.88390 1.23635 1.00268 0.97881 0.96290 1.21592 0.98122 0.99346 0.89538 0.87696 1.19964 0.97333 0.93797 0.95724 1.21196 0.98034 0.98684 0.94539 1.21267 1.00505 0.98033 0.93695 1.21167 1.03716 0.97468 0.85823 1.98381 1.91077 1.98527 1.17249 1.21264 0.98529 0.97170 0.96652 1.21288 0.99653 0.99397 0.92377 1.23417 0.96581 1.01110 0.95357 1.18100 1.09003 0.79576 0.98893 1.91484 1.93718 1.31163 1.94967 1.21511 0.94987 0.94545 0.95285 0.74329 0.88192 1.22002 1.21095 0.82595 0.74329 0.91991 0.87975 0.83362 0.84074 0.84199 0.83524 0.87495 0.89984 0.81590 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 1.45 12.82 -148.98 -1.91 -0.46 16 2 C -0.07 0.20 2.81 71.24 0.20 0.40 16 3 Si 0.77 -3.39 29.88 68.60 2.05 -1.34 16 4 C -0.17 -0.56 5.39 -19.77 -0.11 -0.67 16 5 C 0.13 0.74 9.84 84.61 0.83 1.58 16 6 N -0.53 -4.00 9.13 -193.04 -1.76 -5.76 16 7 C 0.38 2.21 7.49 133.08 1.00 3.21 16 8 N -0.69 -0.85 5.42 -321.35 -1.74 -2.59 16 9 C 0.13 -0.12 4.35 45.61 0.20 0.08 16 10 H 0.10 0.16 7.41 -2.38 -0.02 0.14 16 11 C -0.14 0.26 7.28 31.21 0.23 0.48 16 12 C -0.07 0.25 3.85 -11.01 -0.04 0.20 16 13 H 0.10 -0.50 8.09 -2.39 -0.02 -0.52 16 14 C -0.07 0.08 5.29 -19.86 -0.11 -0.02 16 15 C -0.11 0.11 8.53 22.27 0.19 0.30 16 16 C -0.12 -0.15 9.83 22.29 0.22 0.07 16 17 C -0.06 -0.19 6.32 22.32 0.14 -0.05 16 18 Cl -0.08 -0.37 28.96 -2.72 -0.08 -0.45 16 19 C -0.12 -0.19 9.83 22.29 0.22 0.03 16 20 C -0.11 0.06 9.71 22.26 0.22 0.27 16 21 C -0.13 0.54 7.29 31.12 0.23 0.77 16 22 C -0.03 -0.16 7.35 22.58 0.17 0.01 16 23 F -0.13 -0.71 16.65 44.97 0.75 0.04 16 24 C -0.04 -0.13 9.82 22.48 0.22 0.09 16 25 H 0.41 -5.30 8.74 -74.06 -0.65 -5.94 16 26 H 0.10 -0.77 7.96 -2.39 -0.02 -0.79 16 27 H -0.29 -0.89 7.05 99.48 0.70 -0.19 16 28 H -0.28 -0.27 7.11 99.48 0.71 0.44 16 29 H 0.16 0.63 4.87 -2.91 -0.01 0.61 16 30 H 0.42 -0.62 8.18 -92.71 -0.76 -1.38 16 31 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.10 -0.32 6.41 -2.39 -0.02 -0.33 16 33 H 0.15 -0.72 6.73 -2.91 -0.02 -0.74 16 34 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 35 H 0.14 -0.08 8.06 -2.91 -0.02 -0.10 16 36 H 0.15 -0.64 8.05 -2.91 -0.02 -0.67 16 37 H 0.11 -0.57 7.62 -2.39 -0.02 -0.58 16 38 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 39 H 0.17 -0.06 8.06 -2.91 -0.02 -0.08 16 Total: 0.00 -15.29 346.48 0.85 -14.44 By element: Atomic # 1 Polarization: -10.37 SS G_CDS: -0.25 Total: -10.63 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: 3.80 Total: 6.75 kcal Atomic # 7 Polarization: -4.84 SS G_CDS: -3.50 Total: -8.35 kcal Atomic # 8 Polarization: 1.45 SS G_CDS: -1.91 Total: -0.46 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.75 Total: 0.04 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.05 Total: -1.34 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -0.08 Total: -0.45 kcal Total: -15.29 0.85 -14.44 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9610466_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.571 kcal (2) G-P(sol) polarization free energy of solvation -15.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.437 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds