Wall clock time and date at job start Tue Mar 9 2021 13:45:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38215 * 119.99580 * 2 1 4 4 C 1.38263 * 119.99594 * 180.27630 * 3 2 1 5 5 C 1.50693 * 120.00058 * 179.74175 * 4 3 2 6 6 H 1.08995 * 112.85195 * 348.52937 * 5 4 3 7 7 C 1.53785 * 113.61331 * 119.72695 * 5 4 3 8 8 C 1.53781 * 87.08277 * 140.06613 * 7 5 4 9 9 H 1.09002 * 113.61228 * 220.01683 * 8 7 5 10 10 N 1.46500 * 113.61711 * 89.19510 * 8 7 5 11 11 C 1.39146 * 120.00016 * 156.52760 * 10 8 7 12 12 N 1.32336 * 119.71524 * 0.02562 * 11 10 8 13 13 C 1.32012 * 121.64341 * 179.97438 * 12 11 10 14 14 C 1.37980 * 120.90480 * 0.02562 * 13 12 11 15 15 C 1.50689 * 120.33104 * 179.97438 * 14 13 12 16 16 O 1.42898 * 109.47377 * 119.99797 * 15 14 13 17 17 Si 1.86305 * 109.46998 * 359.97438 * 15 14 13 18 18 C 1.38909 * 119.34282 * 0.02562 * 14 13 12 19 19 C 1.38442 * 118.48637 * 359.74322 * 18 14 13 20 20 F 1.35104 * 120.47273 * 180.26772 * 19 18 14 21 21 C 1.53776 * 113.69232 * 217.25711 * 5 4 3 22 22 C 1.38219 * 120.00001 * 359.46430 * 4 3 2 23 23 C 1.38259 * 119.99742 * 0.25908 * 22 4 3 24 24 C 1.38215 * 120.00045 * 359.97438 * 23 22 4 25 25 H 1.08992 * 109.47296 * 270.27942 * 1 2 3 26 26 H 1.08997 * 109.47157 * 30.28221 * 1 2 3 27 27 H 1.09002 * 109.46872 * 150.27636 * 1 2 3 28 28 H 1.07996 * 120.00405 * 0.02562 * 3 2 1 29 29 H 1.08993 * 113.61827 * 25.50972 * 7 5 4 30 30 H 1.09006 * 113.68471 * 254.62198 * 7 5 4 31 31 H 0.96998 * 119.99853 * 336.53388 * 10 8 7 32 32 H 1.08003 * 119.54634 * 179.97438 * 13 12 11 33 33 H 1.08999 * 109.47547 * 239.99850 * 15 14 13 34 34 H 0.96702 * 114.00408 * 300.00456 * 16 15 14 35 35 H 1.48497 * 109.99870 * 58.68224 * 17 15 14 36 36 H 1.48499 * 109.99985 * 179.97438 * 17 15 14 37 37 H 1.08002 * 120.75598 * 180.02562 * 18 14 13 38 38 H 1.09003 * 113.61687 * 105.45764 * 21 5 4 39 39 H 1.09009 * 113.61565 * 334.56112 * 21 5 4 40 40 H 1.07993 * 120.00162 * 180.27966 * 22 4 3 41 41 H 1.08000 * 119.99740 * 180.02562 * 23 22 4 42 42 H 1.08003 * 119.99912 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1970 0.0000 4 6 3.5806 1.1970 -0.0058 5 6 4.3341 2.5021 -0.0117 6 1 3.6924 3.3604 -0.2105 7 6 5.2523 2.6888 1.2078 8 6 6.2801 3.3007 0.2414 9 1 7.3073 3.0009 0.4493 10 7 6.1339 4.7481 0.0685 11 6 7.2197 5.5123 -0.3479 12 7 8.3816 4.9257 -0.5866 13 6 9.4361 5.6136 -0.9836 14 6 9.3641 6.9795 -1.1646 15 6 10.5760 7.7521 -1.6176 16 8 10.2901 8.4030 -2.8572 17 14 12.0084 6.5828 -1.8453 18 6 8.1635 7.6357 -0.9242 19 6 7.0731 6.8880 -0.5136 20 9 5.8848 7.4843 -0.2737 21 6 5.6101 2.4750 -0.8694 22 6 4.2717 0.0001 -0.0004 23 6 3.5804 -1.1973 0.0054 24 6 2.1983 -1.1973 0.0063 25 1 -0.3633 0.0050 1.0276 26 1 -0.3633 0.8874 -0.5182 27 1 -0.3633 -0.8925 -0.5096 28 1 1.6580 2.1323 0.0004 29 1 5.5790 1.7506 1.6561 30 1 4.8672 3.3970 1.9415 31 1 5.2802 5.1738 0.2444 32 1 10.3682 5.1002 -1.1683 33 1 10.8328 8.4986 -0.8661 34 1 10.0531 7.7982 -3.5736 35 1 11.6595 5.5408 -2.8441 36 1 13.2098 7.3324 -2.2926 37 1 8.0814 8.7041 -1.0591 38 1 5.5130 3.0109 -1.8137 39 1 6.0347 1.4782 -0.9891 40 1 5.3517 0.0001 -0.0003 41 1 4.1205 -2.1326 0.0101 42 1 1.6583 -2.1326 0.0104 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9650860_17656566.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:51 Heat of formation + Delta-G solvation = 15.553268 kcal Electronic energy + Delta-G solvation = -25039.064406 eV Core-core repulsion = 21286.670299 eV Total energy + Delta-G solvation = -3752.394106 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.138 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -49.87125 -41.64664 -41.01168 -39.39304 -38.04158 -35.59514 -33.54266 -33.15707 -32.15941 -30.91741 -27.85060 -26.86952 -26.71704 -26.04042 -24.69971 -23.08703 -22.97985 -21.94434 -19.96700 -19.47386 -18.55312 -18.20481 -17.65501 -17.55480 -16.96951 -16.68737 -16.30316 -16.13817 -16.00102 -15.83455 -15.46147 -15.21654 -14.79250 -14.66175 -14.47837 -14.32091 -14.03743 -13.98226 -13.79621 -13.52969 -13.42933 -13.11181 -12.90542 -12.71186 -12.62331 -12.18925 -12.04210 -11.89344 -11.70035 -11.28118 -11.12056 -10.76581 -10.63459 -10.53561 -9.66403 -9.44358 -8.78048 -5.01753 -0.07275 0.11366 0.43913 0.50343 1.21283 1.54137 1.90429 1.92294 2.54000 2.80169 3.02944 3.21955 3.32994 3.45868 3.54895 3.64795 3.67777 3.83111 3.89321 3.97143 3.98018 4.03600 4.14221 4.23180 4.43335 4.45093 4.45941 4.52627 4.62221 4.68390 4.69596 4.70649 4.73514 4.80334 4.89877 4.96109 4.97566 5.00393 5.11762 5.18230 5.25962 5.43023 5.59447 5.70018 5.74280 5.97234 6.12860 6.16197 6.34502 6.94785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.118 4.118 4 C -0.067 4.067 5 C -0.074 4.074 6 H 0.094 0.906 7 C -0.137 4.137 8 C 0.133 3.867 9 H 0.109 0.891 10 N -0.699 5.699 11 C 0.393 3.607 12 N -0.510 5.510 13 C 0.148 3.852 14 C -0.208 4.208 15 C -0.062 4.062 16 O -0.530 6.530 17 Si 0.682 3.318 18 C -0.037 4.037 19 C -0.021 4.021 20 F -0.134 7.134 21 C -0.144 4.144 22 C -0.123 4.123 23 C -0.113 4.113 24 C -0.125 4.125 25 H 0.071 0.929 26 H 0.066 0.934 27 H 0.067 0.933 28 H 0.119 0.881 29 H 0.099 0.901 30 H 0.075 0.925 31 H 0.412 0.588 32 H 0.164 0.836 33 H 0.120 0.880 34 H 0.377 0.623 35 H -0.256 1.256 36 H -0.254 1.254 37 H 0.150 0.850 38 H 0.072 0.928 39 H 0.096 0.904 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.411 -2.126 1.798 2.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.136 4.136 4 C -0.067 4.067 5 C -0.093 4.093 6 H 0.113 0.887 7 C -0.175 4.175 8 C 0.027 3.973 9 H 0.127 0.873 10 N -0.331 5.331 11 C 0.155 3.845 12 N -0.227 5.227 13 C -0.009 4.009 14 C -0.213 4.213 15 C -0.172 4.172 16 O -0.336 6.336 17 Si 0.583 3.417 18 C -0.064 4.064 19 C -0.047 4.047 20 F -0.113 7.113 21 C -0.183 4.183 22 C -0.141 4.141 23 C -0.131 4.131 24 C -0.143 4.143 25 H 0.090 0.910 26 H 0.085 0.915 27 H 0.086 0.914 28 H 0.137 0.863 29 H 0.118 0.882 30 H 0.094 0.906 31 H 0.250 0.750 32 H 0.180 0.820 33 H 0.138 0.862 34 H 0.224 0.776 35 H -0.181 1.181 36 H -0.179 1.179 37 H 0.167 0.833 38 H 0.091 0.909 39 H 0.114 0.886 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 1.171 -3.003 1.742 3.663 hybrid contribution -1.467 1.349 -1.007 2.233 sum -0.296 -1.654 0.735 1.834 Atomic orbital electron populations 1.20817 0.91140 1.02913 1.02478 1.19948 0.96152 0.93162 0.99111 1.20941 0.93561 0.97578 1.01521 1.19659 0.93377 0.94373 0.99287 1.21584 0.95114 0.95168 0.97388 0.88734 1.23450 0.95860 1.01896 0.96300 1.21822 1.00600 0.78852 0.95983 0.87272 1.44249 1.10350 1.06482 1.72026 1.18401 0.88419 0.86148 0.91526 1.67309 0.98084 1.38622 1.18660 1.22352 0.95767 0.90311 0.92451 1.20871 0.96918 0.95097 1.08457 1.24827 1.00733 1.03467 0.88180 1.86610 1.90194 1.36756 1.20066 0.95139 0.77413 0.78876 0.90296 1.21282 0.90321 1.01211 0.93557 1.17998 0.83692 0.90339 1.12655 1.91495 1.43374 1.83590 1.92800 1.23595 0.95352 1.01158 0.98225 1.20983 0.99883 0.91893 1.01314 1.21152 0.94319 0.98063 0.99591 1.21069 0.94368 0.97578 1.01331 0.91047 0.91504 0.91436 0.86273 0.88220 0.90607 0.75030 0.81978 0.86190 0.77575 1.18074 1.17856 0.83276 0.90948 0.88613 0.85971 0.85977 0.86138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.06 10.01 36.01 0.36 0.42 16 2 C -0.08 -0.10 5.88 -104.62 -0.62 -0.72 16 3 C -0.12 -0.13 9.37 -39.58 -0.37 -0.50 16 4 C -0.07 -0.04 5.29 -104.62 -0.55 -0.60 16 5 C -0.07 0.06 3.86 -90.96 -0.35 -0.29 16 6 H 0.09 -0.10 8.09 -51.93 -0.42 -0.52 16 7 C -0.14 0.21 7.29 -25.92 -0.19 0.02 16 8 C 0.13 -0.10 4.33 -67.12 -0.29 -0.40 16 9 H 0.11 -0.01 7.45 -51.93 -0.39 -0.40 16 10 N -0.70 0.03 5.42 -53.06 -0.29 -0.26 16 11 C 0.39 0.57 7.49 -154.86 -1.16 -0.59 16 12 N -0.51 -0.74 9.15 -12.36 -0.11 -0.85 16 13 C 0.15 -0.03 9.84 -17.57 -0.17 -0.20 16 14 C -0.21 0.08 5.40 -104.47 -0.56 -0.48 16 15 C -0.06 0.07 2.83 36.00 0.10 0.18 16 16 O -0.53 -0.21 12.78 -35.23 -0.45 -0.66 16 17 Si 0.68 -1.34 29.82 -169.99 -5.07 -6.41 16 18 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 19 C -0.02 -0.03 7.35 -39.10 -0.29 -0.32 16 20 F -0.13 -0.29 16.65 2.25 0.04 -0.25 16 21 C -0.14 0.10 7.26 -25.92 -0.19 -0.08 16 22 C -0.12 -0.06 8.61 -39.58 -0.34 -0.40 16 23 C -0.11 -0.09 10.05 -39.58 -0.40 -0.48 16 24 C -0.13 -0.14 9.70 -39.58 -0.38 -0.52 16 25 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.07 -0.07 8.09 -51.93 -0.42 -0.49 16 27 H 0.07 -0.07 8.09 -51.93 -0.42 -0.49 16 28 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 29 H 0.10 -0.17 7.72 -51.93 -0.40 -0.57 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.41 -0.39 8.18 -40.82 -0.33 -0.72 16 32 H 0.16 -0.40 4.88 -52.48 -0.26 -0.65 16 33 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 34 H 0.38 -0.87 8.70 45.56 0.40 -0.47 16 35 H -0.26 0.02 7.11 56.52 0.40 0.42 16 36 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 37 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.10 -0.11 6.32 -51.92 -0.33 -0.44 16 40 H 0.12 -0.13 6.67 -52.49 -0.35 -0.48 16 41 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 42 H 0.12 -0.04 8.06 -52.48 -0.42 -0.47 16 LS Contribution 351.13 15.07 5.29 5.29 Total: 0.00 -5.40 351.13 -11.87 -17.27 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -5.49 Total: -8.75 kcal Atomic # 6 Polarization: 0.41 SS G_CDS: -5.78 Total: -5.37 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.40 Total: -1.11 kcal Atomic # 8 Polarization: -0.21 SS G_CDS: -0.45 Total: -0.66 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.07 Total: -6.41 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -5.40 -11.87 -17.27 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9650860_17656566.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.823 kcal (2) G-P(sol) polarization free energy of solvation -5.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.269 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds