Wall clock time and date at job start Tue Mar 9 2021 13:45:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47337 * 2 1 4 4 C 1.50704 * 109.47068 * 120.00170 * 2 1 3 5 5 C 1.38606 * 120.72127 * 64.99828 * 4 2 1 6 6 N 1.32272 * 119.19722 * 179.97438 * 5 4 2 7 7 C 1.32498 * 120.73997 * 359.97438 * 6 5 4 8 8 N 1.38407 * 119.21437 * 180.02562 * 7 6 5 9 9 C 1.46505 * 119.99576 * 180.02562 * 8 7 6 10 10 H 1.08994 * 112.85223 * 336.19667 * 9 8 7 11 11 C 1.53953 * 113.53529 * 107.50751 * 9 8 7 12 12 C 1.53775 * 87.02302 * 89.18593 * 11 9 8 13 13 H 1.08995 * 113.61634 * 270.77298 * 12 11 9 14 14 C 1.50698 * 113.61647 * 139.95082 * 12 11 9 15 15 C 1.38227 * 119.96819 * 320.86088 * 14 12 11 16 16 C 1.38236 * 120.04131 * 179.97438 * 15 14 12 17 17 C 1.38415 * 119.98423 * 0.02562 * 16 15 14 18 18 F 1.35104 * 120.02489 * 180.02562 * 17 16 15 19 19 C 1.38559 * 119.94039 * 359.97438 * 17 16 15 20 20 Br 1.89104 * 120.01981 * 180.02562 * 19 17 16 21 21 C 1.38252 * 119.95880 * 0.02562 * 19 17 16 22 22 C 1.53778 * 113.61329 * 204.99860 * 9 8 7 23 23 N 1.32492 * 121.56336 * 0.27501 * 7 6 5 24 24 C 1.32272 * 120.74165 * 359.44716 * 23 7 6 25 25 H 0.96699 * 113.99811 * 300.00086 * 1 2 3 26 26 H 1.09005 * 109.47232 * 239.99815 * 2 1 3 27 27 H 1.48501 * 110.00273 * 299.99860 * 3 2 1 28 28 H 1.48497 * 110.00202 * 61.31862 * 3 2 1 29 29 H 1.07996 * 120.40141 * 359.95524 * 5 4 2 30 30 H 0.96996 * 120.00238 * 0.02562 * 8 7 6 31 31 H 1.09001 * 113.66875 * 334.65686 * 11 9 8 32 32 H 1.09006 * 113.61478 * 203.70675 * 11 9 8 33 33 H 1.07992 * 119.98131 * 0.02562 * 15 14 12 34 34 H 1.08005 * 120.00545 * 180.27425 * 16 15 14 35 35 H 1.08004 * 119.99115 * 179.97438 * 21 19 17 36 36 H 1.08995 * 113.61569 * 156.33196 * 22 9 8 37 37 H 1.09009 * 113.68953 * 25.44624 * 22 9 8 38 38 H 1.07998 * 120.40217 * 180.25301 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6926 -2.0634 1.4140 6 7 2.1478 -2.6568 2.5050 7 6 2.8250 -1.9728 3.4156 8 7 3.2873 -2.6255 4.5451 9 6 4.0375 -1.8858 5.5631 10 1 4.5178 -0.9907 5.1679 11 6 3.2407 -1.6415 6.8575 12 6 3.7913 -2.9881 7.3556 13 1 3.1668 -3.8406 7.0891 14 6 4.1801 -2.9799 8.8116 15 6 4.7995 -1.8699 9.3546 16 6 5.1563 -1.8606 10.6901 17 6 4.8938 -2.9636 11.4840 18 9 5.2418 -2.9552 12.7894 19 6 4.2730 -4.0759 10.9389 20 35 3.9126 -5.5839 12.0216 21 6 3.9171 -4.0827 9.6030 22 6 4.9765 -2.7702 6.4003 23 7 3.0660 -0.6778 3.2727 24 6 2.6435 -0.0255 2.2024 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8900 27 1 1.5616 2.4679 -1.2085 28 1 1.5880 2.4585 1.2242 29 1 1.1413 -2.6262 0.6753 30 1 3.1145 -3.5727 4.6628 31 1 2.1604 -1.6383 6.7124 32 1 3.5939 -0.7856 7.4328 33 1 5.0040 -1.0090 8.7354 34 1 5.6362 -0.9912 11.1149 35 1 3.4335 -4.9496 9.1774 36 1 5.8053 -2.2236 6.8501 37 1 5.2965 -3.6773 5.8875 38 1 2.8465 1.0292 2.0897 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9650942_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:55 Heat of formation + Delta-G solvation = 46.852082 kcal Electronic energy + Delta-G solvation = -24850.470634 eV Core-core repulsion = 20849.727452 eV Total energy + Delta-G solvation = -4000.743183 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.028 amu Computer time = 1.93 seconds Orbital eigenvalues (eV) -49.99543 -42.20752 -41.35977 -39.39559 -38.15192 -35.62525 -34.72745 -33.51921 -32.55413 -31.53374 -30.24038 -27.04808 -26.89806 -26.18749 -25.54564 -24.21234 -23.36738 -22.65754 -20.44733 -19.66260 -18.88857 -18.61353 -18.13020 -17.71268 -17.13240 -16.78070 -16.59652 -16.49714 -16.15209 -15.84437 -15.81391 -15.50989 -15.07424 -14.78753 -14.64422 -14.48652 -14.22353 -14.01688 -13.85806 -13.74508 -13.43054 -13.19407 -12.48651 -12.33929 -12.26838 -12.14432 -11.88551 -11.78589 -11.75421 -11.53083 -11.33767 -11.20577 -10.75848 -10.09549 -10.05283 -9.65607 -9.17716 -5.06166 -0.25112 -0.08058 0.02071 0.12456 0.45035 1.18283 1.48244 1.69330 1.88363 2.19877 2.76171 2.98570 3.06905 3.26137 3.28339 3.35607 3.49324 3.54880 3.57612 3.66297 3.69108 3.74965 3.87773 3.91042 4.03451 4.14590 4.38689 4.45176 4.50479 4.52262 4.63652 4.66931 4.70831 4.73908 4.78368 4.86034 4.93482 4.94021 5.21832 5.30364 5.53473 5.74415 5.96192 6.30894 6.34222 7.24617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.291 4.291 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.137 3.863 10 H 0.113 0.887 11 C -0.145 4.145 12 C -0.074 4.074 13 H 0.102 0.898 14 C -0.075 4.075 15 C -0.073 4.073 16 C -0.143 4.143 17 C 0.123 3.877 18 F -0.124 7.124 19 C -0.129 4.129 20 Br -0.027 7.027 21 C -0.059 4.059 22 C -0.137 4.137 23 N -0.560 5.560 24 C 0.198 3.802 25 H 0.376 0.624 26 H 0.120 0.880 27 H -0.253 1.253 28 H -0.257 1.257 29 H 0.171 0.829 30 H 0.415 0.585 31 H 0.075 0.925 32 H 0.097 0.903 33 H 0.142 0.858 34 H 0.147 0.853 35 H 0.142 0.858 36 H 0.102 0.898 37 H 0.080 0.920 38 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.322 2.326 -2.742 4.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.165 4.165 3 Si 0.581 3.419 4 C -0.299 4.299 5 C 0.056 3.944 6 N -0.290 5.290 7 C 0.213 3.787 8 N -0.314 5.314 9 C 0.030 3.970 10 H 0.131 0.869 11 C -0.184 4.184 12 C -0.092 4.092 13 H 0.120 0.880 14 C -0.076 4.076 15 C -0.091 4.091 16 C -0.163 4.163 17 C 0.101 3.899 18 F -0.102 7.102 19 C -0.209 4.209 20 Br 0.059 6.941 21 C -0.079 4.079 22 C -0.175 4.175 23 N -0.282 5.282 24 C 0.030 3.970 25 H 0.223 0.777 26 H 0.138 0.862 27 H -0.178 1.178 28 H -0.182 1.182 29 H 0.188 0.812 30 H 0.253 0.747 31 H 0.094 0.906 32 H 0.115 0.885 33 H 0.159 0.841 34 H 0.164 0.836 35 H 0.160 0.840 36 H 0.120 0.880 37 H 0.099 0.901 38 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 2.522 1.892 -1.843 3.652 hybrid contribution -1.371 0.099 -0.004 1.374 sum 1.151 1.991 -1.847 2.950 Atomic orbital electron populations 1.86618 1.17753 1.79860 1.49338 1.24680 0.83769 1.10575 0.97455 0.95186 0.91472 0.74541 0.80749 1.21659 1.09012 0.97717 1.01525 1.22850 0.89101 0.90973 0.91504 1.67981 1.16499 1.40066 1.04472 1.19345 0.86992 0.85557 0.86758 1.43807 1.58222 1.11782 1.17563 1.21867 0.92299 0.96061 0.86744 0.86937 1.23660 1.01361 0.96754 0.96613 1.21630 0.98331 0.99642 0.89619 0.88029 1.19759 0.98772 0.93454 0.95656 1.21035 0.95810 0.98232 0.94031 1.21194 1.02887 0.97858 0.94329 1.17436 0.98739 0.94484 0.79211 1.91580 1.89530 1.96640 1.32443 1.22000 1.07920 0.94516 0.96508 1.96830 1.94267 1.35802 1.67228 1.20956 0.97562 0.98917 0.90483 1.23486 0.96750 1.00980 0.96306 1.67917 1.27050 1.08204 1.25058 1.22850 0.88141 0.99479 0.86537 0.77658 0.86186 1.17758 1.18232 0.81236 0.74706 0.90584 0.88457 0.84057 0.83572 0.84038 0.87997 0.90140 0.81627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 33. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.12 12.85 -35.23 -0.45 -0.33 16 2 C -0.05 0.10 2.83 36.01 0.10 0.20 16 3 Si 0.68 -1.65 29.95 -169.99 -5.09 -6.74 16 4 C -0.29 0.25 5.36 -104.35 -0.56 -0.31 16 5 C 0.22 0.06 10.99 -17.23 -0.19 -0.13 16 6 N -0.57 -1.05 10.46 -13.93 -0.15 -1.20 16 7 C 0.57 0.79 8.43 -322.80 -2.72 -1.93 16 8 N -0.68 0.63 5.41 -54.91 -0.30 0.33 16 9 C 0.14 -0.33 4.34 -67.03 -0.29 -0.62 16 10 H 0.11 -0.18 7.37 -51.93 -0.38 -0.57 16 11 C -0.14 0.41 7.27 -25.83 -0.19 0.23 16 12 C -0.07 0.24 3.85 -90.96 -0.35 -0.11 16 13 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 14 C -0.08 0.14 5.29 -104.62 -0.55 -0.41 16 15 C -0.07 0.16 8.53 -39.59 -0.34 -0.17 16 16 C -0.14 0.13 10.03 -39.52 -0.40 -0.27 16 17 C 0.12 0.17 7.27 -39.40 -0.29 -0.11 16 18 F -0.12 -0.37 16.73 2.25 0.04 -0.33 16 19 C -0.13 -0.15 6.23 -39.46 -0.25 -0.40 16 20 Br -0.03 -0.05 33.29 -68.01 -2.26 -2.31 16 21 C -0.06 0.04 9.45 -39.57 -0.37 -0.34 16 22 C -0.14 0.50 7.29 -25.92 -0.19 0.31 16 23 N -0.56 -0.64 9.13 -13.93 -0.13 -0.76 16 24 C 0.20 -0.10 9.92 -17.23 -0.17 -0.28 16 25 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 26 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 27 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 28 H -0.26 0.16 7.02 56.52 0.40 0.56 16 29 H 0.17 -0.25 8.06 -52.49 -0.42 -0.67 16 30 H 0.42 -0.78 8.82 -40.82 -0.36 -1.14 16 31 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.10 -0.36 6.39 -51.93 -0.33 -0.69 16 33 H 0.14 -0.64 6.72 -52.49 -0.35 -0.99 16 34 H 0.15 -0.38 8.06 -52.48 -0.42 -0.81 16 35 H 0.14 -0.27 8.05 -52.48 -0.42 -0.70 16 36 H 0.10 -0.43 7.64 -51.93 -0.40 -0.83 16 37 H 0.08 -0.28 8.14 -51.92 -0.42 -0.70 16 38 H 0.17 -0.46 5.01 -52.49 -0.26 -0.72 16 LS Contribution 346.16 15.07 5.22 5.22 Total: 0.00 -6.60 346.16 -13.71 -20.31 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -3.84 Total: -9.84 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -6.75 Total: -4.35 kcal Atomic # 7 Polarization: -1.06 SS G_CDS: -0.57 Total: -1.63 kcal Atomic # 8 Polarization: 0.12 SS G_CDS: -0.45 Total: -0.33 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.09 Total: -6.74 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -6.60 -13.71 -20.31 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9650942_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.162 kcal (2) G-P(sol) polarization free energy of solvation -6.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.310 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.93 seconds