Wall clock time and date at job start Tue Mar 9 2021 13:45:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47337 * 2 1 4 4 C 1.50704 * 109.47068 * 120.00170 * 2 1 3 5 5 C 1.38606 * 120.72127 * 64.99828 * 4 2 1 6 6 N 1.32272 * 119.19722 * 179.97438 * 5 4 2 7 7 C 1.32498 * 120.73997 * 359.97438 * 6 5 4 8 8 N 1.38407 * 119.21437 * 180.02562 * 7 6 5 9 9 C 1.46505 * 119.99576 * 180.02562 * 8 7 6 10 10 H 1.08994 * 112.85223 * 336.19667 * 9 8 7 11 11 C 1.53953 * 113.53529 * 107.50751 * 9 8 7 12 12 C 1.53775 * 87.02302 * 89.18593 * 11 9 8 13 13 H 1.08995 * 113.61634 * 270.77298 * 12 11 9 14 14 C 1.50698 * 113.61647 * 139.95082 * 12 11 9 15 15 C 1.38227 * 119.96819 * 320.86088 * 14 12 11 16 16 C 1.38236 * 120.04131 * 179.97438 * 15 14 12 17 17 C 1.38415 * 119.98423 * 0.02562 * 16 15 14 18 18 F 1.35104 * 120.02489 * 180.02562 * 17 16 15 19 19 C 1.38559 * 119.94039 * 359.97438 * 17 16 15 20 20 Br 1.89104 * 120.01981 * 180.02562 * 19 17 16 21 21 C 1.38252 * 119.95880 * 0.02562 * 19 17 16 22 22 C 1.53778 * 113.61329 * 204.99860 * 9 8 7 23 23 N 1.32492 * 121.56336 * 0.27501 * 7 6 5 24 24 C 1.32272 * 120.74165 * 359.44716 * 23 7 6 25 25 H 0.96699 * 113.99811 * 300.00086 * 1 2 3 26 26 H 1.09005 * 109.47232 * 239.99815 * 2 1 3 27 27 H 1.48501 * 110.00273 * 299.99860 * 3 2 1 28 28 H 1.48497 * 110.00202 * 61.31862 * 3 2 1 29 29 H 1.07996 * 120.40141 * 359.95524 * 5 4 2 30 30 H 0.96996 * 120.00238 * 0.02562 * 8 7 6 31 31 H 1.09001 * 113.66875 * 334.65686 * 11 9 8 32 32 H 1.09006 * 113.61478 * 203.70675 * 11 9 8 33 33 H 1.07992 * 119.98131 * 0.02562 * 15 14 12 34 34 H 1.08005 * 120.00545 * 180.27425 * 16 15 14 35 35 H 1.08004 * 119.99115 * 179.97438 * 21 19 17 36 36 H 1.08995 * 113.61569 * 156.33196 * 22 9 8 37 37 H 1.09009 * 113.68953 * 25.44624 * 22 9 8 38 38 H 1.07998 * 120.40217 * 180.25301 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6926 -2.0634 1.4140 6 7 2.1478 -2.6568 2.5050 7 6 2.8250 -1.9728 3.4156 8 7 3.2873 -2.6255 4.5451 9 6 4.0375 -1.8858 5.5631 10 1 4.5178 -0.9907 5.1679 11 6 3.2407 -1.6415 6.8575 12 6 3.7913 -2.9881 7.3556 13 1 3.1668 -3.8406 7.0891 14 6 4.1801 -2.9799 8.8116 15 6 4.7995 -1.8699 9.3546 16 6 5.1563 -1.8606 10.6901 17 6 4.8938 -2.9636 11.4840 18 9 5.2418 -2.9552 12.7894 19 6 4.2730 -4.0759 10.9389 20 35 3.9126 -5.5839 12.0216 21 6 3.9171 -4.0827 9.6030 22 6 4.9765 -2.7702 6.4003 23 7 3.0660 -0.6778 3.2727 24 6 2.6435 -0.0255 2.2024 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8900 27 1 1.5616 2.4679 -1.2085 28 1 1.5880 2.4585 1.2242 29 1 1.1413 -2.6262 0.6753 30 1 3.1145 -3.5727 4.6628 31 1 2.1604 -1.6383 6.7124 32 1 3.5939 -0.7856 7.4328 33 1 5.0040 -1.0090 8.7354 34 1 5.6362 -0.9912 11.1149 35 1 3.4335 -4.9496 9.1774 36 1 5.8053 -2.2236 6.8501 37 1 5.2965 -3.6773 5.8875 38 1 2.8465 1.0292 2.0897 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_9650942_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:54 Heat of formation + Delta-G solvation = 53.212897 kcal Electronic energy + Delta-G solvation = -24850.194809 eV Core-core repulsion = 20849.727452 eV Total energy + Delta-G solvation = -4000.467357 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.028 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -50.08532 -42.14682 -41.21217 -39.27712 -38.07101 -35.53007 -34.71030 -33.48890 -32.47110 -31.45699 -30.21503 -26.93660 -26.65947 -26.08770 -25.46038 -24.12028 -23.30097 -22.55733 -20.27944 -19.57830 -18.86340 -18.53805 -18.06387 -17.66669 -17.00223 -16.86024 -16.52016 -16.34113 -16.07838 -15.76661 -15.71347 -15.42071 -14.95638 -14.69644 -14.56736 -14.41107 -14.17079 -13.98797 -13.70662 -13.53477 -13.29189 -13.13863 -12.37742 -12.25587 -12.24509 -11.98028 -11.88946 -11.72450 -11.67786 -11.46640 -11.24598 -11.08296 -10.67658 -10.03995 -10.02750 -9.61197 -9.08813 -4.88999 -0.19637 0.00501 0.06744 0.15435 0.42398 1.33791 1.61809 1.81180 2.00415 2.29772 2.79278 3.02280 3.16617 3.44688 3.45778 3.50180 3.66334 3.70098 3.71356 3.75104 3.81184 3.96632 4.04672 4.11028 4.15776 4.24081 4.52165 4.65124 4.67035 4.76790 4.79821 4.80724 4.84317 4.87370 4.98994 5.04827 5.09310 5.15202 5.34011 5.46959 5.64480 5.82655 6.07308 6.41577 6.50753 7.28705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.058 4.058 3 Si 0.761 3.239 4 C -0.284 4.284 5 C 0.213 3.787 6 N -0.591 5.591 7 C 0.555 3.445 8 N -0.675 5.675 9 C 0.135 3.865 10 H 0.107 0.893 11 C -0.140 4.140 12 C -0.069 4.069 13 H 0.104 0.896 14 C -0.069 4.069 15 C -0.066 4.066 16 C -0.142 4.142 17 C 0.095 3.905 18 F -0.140 7.140 19 C -0.143 4.143 20 Br -0.044 7.044 21 C -0.066 4.066 22 C -0.126 4.126 23 N -0.573 5.573 24 C 0.193 3.807 25 H 0.385 0.615 26 H 0.131 0.869 27 H -0.302 1.302 28 H -0.277 1.277 29 H 0.181 0.819 30 H 0.418 0.582 31 H 0.061 0.939 32 H 0.110 0.890 33 H 0.170 0.830 34 H 0.163 0.837 35 H 0.150 0.850 36 H 0.114 0.886 37 H 0.081 0.919 38 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.884 3.191 -3.523 5.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.168 4.168 3 Si 0.666 3.334 4 C -0.292 4.292 5 C 0.045 3.955 6 N -0.314 5.314 7 C 0.198 3.802 8 N -0.311 5.311 9 C 0.029 3.971 10 H 0.125 0.875 11 C -0.179 4.179 12 C -0.087 4.087 13 H 0.122 0.878 14 C -0.070 4.070 15 C -0.084 4.084 16 C -0.162 4.162 17 C 0.074 3.926 18 F -0.118 7.118 19 C -0.223 4.223 20 Br 0.041 6.959 21 C -0.086 4.086 22 C -0.164 4.164 23 N -0.295 5.295 24 C 0.026 3.974 25 H 0.234 0.766 26 H 0.148 0.852 27 H -0.230 1.230 28 H -0.204 1.204 29 H 0.198 0.802 30 H 0.256 0.744 31 H 0.080 0.920 32 H 0.128 0.872 33 H 0.187 0.813 34 H 0.181 0.819 35 H 0.168 0.832 36 H 0.132 0.868 37 H 0.100 0.900 38 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 3.093 2.734 -2.604 4.881 hybrid contribution -1.589 -0.115 0.153 1.600 sum 1.504 2.620 -2.452 3.890 Atomic orbital electron populations 1.86593 1.18595 1.80248 1.50126 1.24870 0.83156 1.11268 0.97497 0.94256 0.90149 0.72149 0.76863 1.21677 1.08606 0.97281 1.01652 1.23137 0.89162 0.91704 0.91473 1.67994 1.17378 1.40761 1.05218 1.19616 0.87327 0.85917 0.87324 1.43916 1.57911 1.11978 1.17249 1.21923 0.92578 0.96118 0.86506 0.87461 1.23650 1.00409 0.97333 0.96479 1.21618 0.98664 0.99681 0.88743 0.87751 1.19938 0.97973 0.93054 0.96076 1.21365 0.94531 0.98835 0.93677 1.21456 1.02441 0.97565 0.94689 1.17779 1.00226 0.95622 0.79001 1.91531 1.89907 1.96796 1.33605 1.22104 1.09016 0.94152 0.97069 1.96792 1.94399 1.36710 1.67963 1.21133 0.97632 0.99849 0.89941 1.23458 0.96596 1.00850 0.95528 1.67959 1.27641 1.08190 1.25754 1.23219 0.87743 1.00319 0.86158 0.76579 0.85150 1.22977 1.20390 0.80186 0.74397 0.92044 0.87169 0.81251 0.81947 0.83184 0.86772 0.90046 0.79699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.40 12.85 -148.98 -1.91 -1.51 16 2 C -0.06 0.24 2.83 71.24 0.20 0.45 16 3 Si 0.76 -4.04 29.95 68.60 2.05 -1.99 16 4 C -0.28 0.61 5.36 -19.69 -0.11 0.50 16 5 C 0.21 0.12 10.99 84.71 0.93 1.05 16 6 N -0.59 -2.36 10.46 -197.99 -2.07 -4.43 16 7 C 0.55 1.55 8.43 261.48 2.20 3.75 16 8 N -0.67 1.37 5.41 -327.65 -1.77 -0.40 16 9 C 0.13 -0.78 4.34 45.57 0.20 -0.58 16 10 H 0.11 -0.46 7.37 -2.39 -0.02 -0.47 16 11 C -0.14 0.96 7.27 31.18 0.23 1.19 16 12 C -0.07 0.53 3.85 -11.02 -0.04 0.49 16 13 H 0.10 -0.83 8.09 -2.39 -0.02 -0.84 16 14 C -0.07 0.34 5.29 -19.86 -0.11 0.23 16 15 C -0.07 0.41 8.53 22.27 0.19 0.60 16 16 C -0.14 0.36 10.03 22.31 0.22 0.58 16 17 C 0.09 0.32 7.27 22.39 0.16 0.48 16 18 F -0.14 -1.01 16.73 44.97 0.75 -0.26 16 19 C -0.14 -0.44 6.23 22.35 0.14 -0.30 16 20 Br -0.04 -0.22 33.29 -20.37 -0.68 -0.90 16 21 C -0.07 0.09 9.45 22.28 0.21 0.30 16 22 C -0.13 1.12 7.29 31.12 0.23 1.35 16 23 N -0.57 -1.11 9.13 -197.99 -1.81 -2.92 16 24 C 0.19 -0.32 9.92 84.71 0.84 0.52 16 25 H 0.39 -2.22 8.70 -74.06 -0.64 -2.86 16 26 H 0.13 -0.83 7.96 -2.38 -0.02 -0.85 16 27 H -0.30 -0.91 7.11 99.48 0.71 -0.21 16 28 H -0.28 0.55 7.02 99.48 0.70 1.25 16 29 H 0.18 -0.51 8.06 -2.91 -0.02 -0.53 16 30 H 0.42 -1.58 8.82 -92.71 -0.82 -2.39 16 31 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.11 -1.04 6.39 -2.38 -0.02 -1.06 16 33 H 0.17 -2.05 6.72 -2.91 -0.02 -2.07 16 34 H 0.16 -1.04 8.06 -2.91 -0.02 -1.06 16 35 H 0.15 -0.57 8.05 -2.91 -0.02 -0.59 16 36 H 0.11 -1.25 7.64 -2.39 -0.02 -1.27 16 37 H 0.08 -0.68 8.14 -2.38 -0.02 -0.70 16 38 H 0.19 -1.25 5.01 -2.91 -0.01 -1.26 16 Total: 0.00 -16.69 346.16 -0.22 -16.92 By element: Atomic # 1 Polarization: -14.83 SS G_CDS: -0.29 Total: -15.12 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 5.50 Total: 10.61 kcal Atomic # 7 Polarization: -2.10 SS G_CDS: -5.65 Total: -7.75 kcal Atomic # 8 Polarization: 0.40 SS G_CDS: -1.91 Total: -1.51 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 0.75 Total: -0.26 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: 2.05 Total: -1.99 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.68 Total: -0.90 kcal Total: -16.69 -0.22 -16.92 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9650942_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.129 kcal (2) G-P(sol) polarization free energy of solvation -16.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.916 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds