Wall clock time and date at job start Tue Mar 9 2021 13:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86306 * 109.46954 * 2 1 4 4 C 1.50698 * 109.47484 * 239.99992 * 2 1 3 5 5 C 1.37985 * 120.33046 * 119.99545 * 4 2 1 6 6 N 1.32008 * 120.90030 * 180.02562 * 5 4 2 7 7 C 1.32336 * 121.64859 * 0.02562 * 6 5 4 8 8 N 1.39140 * 119.71540 * 179.97438 * 7 6 5 9 9 C 1.46506 * 120.00046 * 359.97438 * 8 7 6 10 10 H 1.08992 * 112.90684 * 336.24929 * 9 8 7 11 11 C 1.54049 * 113.61276 * 107.62018 * 9 8 7 12 12 C 1.53781 * 87.08031 * 89.07129 * 11 9 8 13 13 H 1.08999 * 113.61181 * 270.87794 * 12 11 9 14 14 C 1.50696 * 113.69134 * 139.98880 * 12 11 9 15 15 C 1.38225 * 119.96963 * 322.18543 * 14 12 11 16 16 C 1.38238 * 120.04157 * 179.77080 * 15 14 12 17 17 C 1.38408 * 119.98455 * 0.50713 * 16 15 14 18 18 F 1.35106 * 120.03029 * 179.76909 * 17 16 15 19 19 C 1.38564 * 119.94032 * 359.74771 * 17 16 15 20 20 Br 1.89101 * 120.02281 * 180.02562 * 19 17 16 21 21 C 1.38256 * 119.97136 * 142.46807 * 14 12 11 22 22 C 1.53781 * 87.08070 * 25.42738 * 12 11 9 23 23 C 1.39336 * 120.56400 * 0.24810 * 7 6 5 24 24 F 1.35101 * 120.47210 * 179.72564 * 23 7 6 25 25 C 1.38447 * 119.05729 * 359.50000 * 23 7 6 26 26 H 0.96696 * 114.00241 * 60.00524 * 1 2 3 27 27 H 1.09001 * 109.47293 * 119.99758 * 2 1 3 28 28 H 1.48492 * 110.00017 * 59.99899 * 3 2 1 29 29 H 1.48496 * 110.00002 * 181.32085 * 3 2 1 30 30 H 1.07995 * 119.54589 * 0.02562 * 5 4 2 31 31 H 0.97002 * 120.00066 * 179.97438 * 8 7 6 32 32 H 1.09005 * 113.62125 * 334.52173 * 11 9 8 33 33 H 1.08996 * 113.68970 * 203.62749 * 11 9 8 34 34 H 1.07994 * 119.97612 * 0.02598 * 15 14 12 35 35 H 1.08002 * 120.00660 * 180.28025 * 16 15 14 36 36 H 1.08000 * 119.99356 * 359.95029 * 21 14 12 37 37 H 1.09002 * 113.61445 * 89.11830 * 22 12 11 38 38 H 1.09002 * 113.61408 * 219.93560 * 22 12 11 39 39 H 1.08004 * 120.75779 * 180.24494 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7250 -0.0463 -2.1432 6 7 3.1709 -0.6575 -3.2250 7 6 2.8776 -1.9228 -3.4783 8 7 3.3688 -2.5271 -4.6314 9 6 4.2064 -1.7629 -5.5591 10 1 4.0474 -0.6871 -5.4863 11 6 5.6911 -2.1726 -5.5306 12 6 5.3444 -3.2094 -6.6122 13 1 5.0319 -4.1728 -6.2093 14 6 6.3930 -3.3370 -7.6869 15 6 7.0575 -2.2129 -8.1402 16 6 8.0230 -2.3288 -9.1227 17 6 8.3173 -3.5698 -9.6603 18 9 9.2575 -3.6836 -10.6239 19 6 7.6471 -4.6955 -9.2091 20 35 8.0478 -6.3923 -9.9415 21 6 6.6855 -4.5775 -8.2227 22 6 4.1712 -2.2946 -7.0016 23 6 2.0764 -2.6533 -2.6032 24 9 1.7735 -3.9434 -2.8665 25 6 1.5989 -2.0398 -1.4576 26 1 -0.3933 0.4416 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5614 2.4679 1.2084 29 1 3.5345 1.7704 -0.0322 30 1 2.9849 0.9875 -1.9701 31 1 3.1567 -3.4545 -4.8210 32 1 6.0038 -2.6159 -4.5851 33 1 6.3678 -1.3911 -5.8760 34 1 6.8250 -1.2440 -7.7237 35 1 8.5450 -1.4507 -9.4733 36 1 6.1630 -5.4546 -7.8704 37 1 4.4312 -1.5456 -7.7496 38 1 3.2573 -2.8365 -7.2451 39 1 0.9790 -2.5814 -0.7584 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9650942_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:09 Heat of formation + Delta-G solvation = -15.445498 kcal Electronic energy + Delta-G solvation = -27198.743274 eV Core-core repulsion = 22791.270601 eV Total energy + Delta-G solvation = -4407.472673 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.023 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -49.99506 -49.91533 -41.75474 -41.13343 -39.36483 -37.96968 -35.57249 -33.52701 -33.22632 -32.24280 -31.07132 -30.19360 -26.96576 -26.83368 -26.11295 -24.83803 -24.18474 -23.06507 -22.61507 -20.38290 -19.56780 -18.88763 -18.55520 -18.26295 -17.70721 -17.56119 -17.10411 -16.96964 -16.77904 -16.42042 -16.14042 -15.98364 -15.67916 -15.41329 -15.16436 -14.90381 -14.76730 -14.40422 -14.35533 -14.28343 -14.06982 -13.84656 -13.67518 -13.49930 -13.35995 -12.67447 -12.47536 -12.32861 -12.14207 -12.10537 -11.76353 -11.52222 -11.33711 -11.21070 -10.74999 -10.69125 -10.50075 -10.09585 -9.65220 -8.83674 -5.12798 -0.25090 -0.12253 -0.07849 0.06918 0.44897 1.18631 1.53866 1.83278 1.89904 2.19952 2.49782 2.98226 2.99028 3.14630 3.28930 3.35425 3.38133 3.50573 3.53749 3.55689 3.73773 3.78908 3.86374 3.90166 3.94227 4.03542 4.36705 4.37387 4.41088 4.47611 4.53227 4.63937 4.66401 4.70386 4.73963 4.77884 4.87082 4.92723 4.94088 4.96597 5.26811 5.37343 5.53479 5.89704 6.09751 6.48475 6.88641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.686 3.314 4 C -0.208 4.208 5 C 0.147 3.853 6 N -0.510 5.510 7 C 0.392 3.608 8 N -0.700 5.700 9 C 0.134 3.866 10 H 0.112 0.888 11 C -0.146 4.146 12 C -0.074 4.074 13 H 0.100 0.900 14 C -0.075 4.075 15 C -0.073 4.073 16 C -0.143 4.143 17 C 0.123 3.877 18 F -0.124 7.124 19 C -0.129 4.129 20 Br -0.027 7.027 21 C -0.060 4.060 22 C -0.138 4.138 23 C -0.019 4.019 24 F -0.133 7.133 25 C -0.038 4.038 26 H 0.380 0.620 27 H 0.116 0.884 28 H -0.251 1.251 29 H -0.254 1.254 30 H 0.163 0.837 31 H 0.413 0.587 32 H 0.075 0.925 33 H 0.096 0.904 34 H 0.142 0.858 35 H 0.147 0.853 36 H 0.142 0.858 37 H 0.101 0.899 38 H 0.078 0.922 39 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.099 3.944 0.065 4.468 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.588 3.412 4 C -0.214 4.214 5 C -0.010 4.010 6 N -0.226 5.226 7 C 0.154 3.846 8 N -0.332 5.332 9 C 0.028 3.972 10 H 0.130 0.870 11 C -0.184 4.184 12 C -0.093 4.093 13 H 0.119 0.881 14 C -0.076 4.076 15 C -0.091 4.091 16 C -0.163 4.163 17 C 0.101 3.899 18 F -0.102 7.102 19 C -0.209 4.209 20 Br 0.059 6.941 21 C -0.079 4.079 22 C -0.176 4.176 23 C -0.046 4.046 24 F -0.112 7.112 25 C -0.064 4.064 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.176 1.176 29 H -0.178 1.178 30 H 0.180 0.820 31 H 0.250 0.750 32 H 0.094 0.906 33 H 0.115 0.885 34 H 0.160 0.840 35 H 0.164 0.836 36 H 0.159 0.841 37 H 0.119 0.881 38 H 0.097 0.903 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.716 4.093 0.000 4.155 hybrid contribution -0.353 -1.550 0.543 1.680 sum -1.069 2.543 0.543 2.811 Atomic orbital electron populations 1.86512 1.17046 1.81665 1.49323 1.24864 0.85257 1.09926 0.96645 0.94841 0.81040 0.77563 0.87776 1.20952 1.04638 0.95226 1.00544 1.22350 0.91733 0.99071 0.87839 1.67279 1.26241 1.07374 1.21742 1.18375 0.89998 0.89105 0.87106 1.44218 1.54215 1.14395 1.20416 1.21850 0.89763 0.97437 0.88135 0.86992 1.23675 0.97283 0.98569 0.98920 1.21619 0.94080 0.99440 0.94133 0.88143 1.19757 0.97781 0.92386 0.97693 1.21039 0.93960 0.99232 0.94872 1.21193 1.00289 0.96040 0.98736 1.17435 0.89547 0.93465 0.89430 1.91581 1.61796 1.96676 1.60140 1.22001 1.03558 0.91882 1.03500 1.96829 1.94148 1.19302 1.83852 1.20951 0.94881 0.98466 0.93648 1.23485 0.98283 0.99328 0.96511 1.17998 1.06730 0.81048 0.98780 1.91497 1.92064 1.33760 1.93903 1.21291 0.96214 0.94279 0.94599 0.77270 0.86696 1.17602 1.17848 0.81997 0.74992 0.90601 0.88522 0.84047 0.83567 0.84068 0.88092 0.90301 0.83246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.58 12.78 -35.23 -0.45 0.13 16 2 C -0.06 0.09 2.84 36.00 0.10 0.19 16 3 Si 0.69 -1.74 29.82 -169.99 -5.07 -6.81 16 4 C -0.21 0.21 5.40 -104.47 -0.56 -0.35 16 5 C 0.15 -0.15 9.84 -17.57 -0.17 -0.32 16 6 N -0.51 -0.23 9.13 -12.37 -0.11 -0.34 16 7 C 0.39 0.16 7.49 -154.86 -1.16 -0.99 16 8 N -0.70 0.97 5.42 -52.92 -0.29 0.68 16 9 C 0.13 -0.34 4.37 -66.97 -0.29 -0.63 16 10 H 0.11 -0.20 7.41 -51.93 -0.38 -0.59 16 11 C -0.15 0.41 7.27 -25.78 -0.19 0.23 16 12 C -0.07 0.23 3.85 -90.96 -0.35 -0.12 16 13 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 14 C -0.08 0.13 5.29 -104.62 -0.55 -0.42 16 15 C -0.07 0.16 8.59 -39.59 -0.34 -0.18 16 16 C -0.14 0.12 10.03 -39.52 -0.40 -0.28 16 17 C 0.12 0.18 7.27 -39.40 -0.29 -0.11 16 18 F -0.12 -0.37 16.73 2.25 0.04 -0.33 16 19 C -0.13 -0.16 6.23 -39.45 -0.25 -0.41 16 20 Br -0.03 -0.05 33.29 -68.01 -2.26 -2.31 16 21 C -0.06 0.03 9.45 -39.57 -0.37 -0.34 16 22 C -0.14 0.49 7.28 -25.92 -0.19 0.31 16 23 C -0.02 -0.01 7.35 -39.10 -0.29 -0.30 16 24 F -0.13 -0.19 16.65 2.25 0.04 -0.15 16 25 C -0.04 0.00 9.75 -39.26 -0.38 -0.38 16 26 H 0.38 -1.85 8.70 45.56 0.40 -1.46 16 27 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 29 H -0.25 0.10 7.11 56.52 0.40 0.50 16 30 H 0.16 -0.52 4.88 -52.49 -0.26 -0.78 16 31 H 0.41 -0.94 8.17 -40.82 -0.33 -1.27 16 32 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.10 -0.35 6.33 -51.93 -0.33 -0.68 16 34 H 0.14 -0.63 6.68 -52.49 -0.35 -0.98 16 35 H 0.15 -0.38 8.06 -52.49 -0.42 -0.80 16 36 H 0.14 -0.26 8.05 -52.49 -0.42 -0.68 16 37 H 0.10 -0.41 7.71 -51.93 -0.40 -0.82 16 38 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 39 H 0.15 -0.11 8.06 -52.48 -0.42 -0.53 16 LS Contribution 356.69 15.07 5.38 5.38 Total: 0.00 -6.12 356.69 -12.21 -18.33 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -3.80 Total: -10.47 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -5.68 Total: -4.10 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.40 Total: 0.34 kcal Atomic # 8 Polarization: 0.58 SS G_CDS: -0.45 Total: 0.13 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.08 Total: -0.49 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.07 Total: -6.81 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -6.12 -12.21 -18.33 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9650942_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.885 kcal (2) G-P(sol) polarization free energy of solvation -6.117 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.331 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds